RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 IGKV2D-26A0A0A0MRZ7 120 aa9.52□□□□□ -0.89
SHMT2-210ENST00000553950 TSPEAR-AS2P59090 65 aa9.52□□□□□ -0.89
SHMT2-210ENST00000553950 CNBPP62633 177 aaKnown RBP9.52□□□□□ -0.89
SHMT2-210ENST00000553950 SYCNQ0VAF6 134 aa9.52□□□□□ -0.89
SHMT2-210ENST00000553950 ZNF625Q96I27 306 aaPredicted RBP9.52□□□□□ -0.89
SHMT2-210ENST00000553950 C12orf57Q99622 126 aa9.52□□□□□ -0.89
SHMT2-210ENST00000553950 COX8AP10176 69 aa9.51□□□□□ -0.89
SHMT2-210ENST00000553950 WFDC2Q14508 124 aa9.51□□□□□ -0.89
SHMT2-210ENST00000553950 HYDINQ4G0P3 5121 aa9.5□□□□□ -0.89
SHMT2-210ENST00000553950 DLEU1O43261 78 aa9.5□□□□□ -0.89
SHMT2-210ENST00000553950 GCSHP23434 173 aa9.5□□□□□ -0.89
SHMT2-210ENST00000553950 RNF151Q2KHN1 245 aa9.5□□□□□ -0.89
SHMT2-210ENST00000553950 CDPF1Q6NVV7 123 aa9.5□□□□□ -0.89
SHMT2-210ENST00000553950 TNP2Q05952 138 aa9.49□□□□□ -0.89
SHMT2-210ENST00000553950 CIRBPQ14011 172 aaKnown RBP9.49□□□□□ -0.89
SHMT2-210ENST00000553950 COX17Q14061 63 aa9.49□□□□□ -0.89
SHMT2-210ENST00000553950 SLC25A34Q6PIV7 304 aa9.49□□□□□ -0.89
SHMT2-210ENST00000553950 SCGB1D4Q6XE38 83 aa9.49□□□□□ -0.89
SHMT2-210ENST00000553950 MEIG1Q5JSS6 88 aa9.48□□□□□ -0.89
SHMT2-210ENST00000553950 Q6ZRU5 148 aa9.48□□□□□ -0.89
SHMT2-210ENST00000553950 BOD1L2Q8IYS8 172 aa9.48□□□□□ -0.89
SHMT2-210ENST00000553950 LINC00518Q8N0U6 118 aa9.48□□□□□ -0.89
SHMT2-210ENST00000553950 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-210ENST00000553950 TMEM238C9JI98 176 aa9.47□□□□□ -0.89
SHMT2-210ENST00000553950 TSTD3H0UI37 97 aa9.47□□□□□ -0.89
SHMT2-210ENST00000553950 TIMM17BO60830 172 aa9.47□□□□□ -0.89
SHMT2-210ENST00000553950 C2orf82Q6UX34 121 aa9.47□□□□□ -0.89
SHMT2-210ENST00000553950 PCP2Q8IVA1 136 aa9.47□□□□□ -0.89
SHMT2-210ENST00000553950 LINC00526Q96FQ7 95 aa9.47□□□□□ -0.89
SHMT2-210ENST00000553950 ERG28Q9UKR5 140 aa9.47□□□□□ -0.89
SHMT2-210ENST00000553950 UNQ6190/PRO20217Q6UXQ8 127 aa9.46□□□□□ -0.9
SHMT2-210ENST00000553950 UQCR10Q9UDW1 63 aa9.46□□□□□ -0.9
SHMT2-210ENST00000553950 RYR2Q92736 4967 aa9.45□□□□□ -0.9
SHMT2-210ENST00000553950 A0A0J9YXY3 114 aa9.45□□□□□ -0.9
SHMT2-210ENST00000553950 COPS9Q8WXC6 57 aa9.45□□□□□ -0.9
SHMT2-210ENST00000553950 C6orf48Q9UBA6 75 aa9.45□□□□□ -0.9
SHMT2-210ENST00000553950 KMT2CQ8NEZ4 4911 aaKnown RBP9.45□□□□□ -0.9
SHMT2-210ENST00000553950 FRAS1Q86XX4 4008 aa9.44□□□□□ -0.9
SHMT2-210ENST00000553950 DNAH10Q8IVF4 4471 aa9.44□□□□□ -0.9
SHMT2-210ENST00000553950 IGLV5-52A0A0A0MRZ9 124 aa9.44□□□□□ -0.9
SHMT2-210ENST00000553950 TLX1NBP0CAT3 122 aa9.44□□□□□ -0.9
SHMT2-210ENST00000553950 C14orf144Q96I85 54 aa9.44□□□□□ -0.9
SHMT2-210ENST00000553950 TTTY13Q9BZ97 58 aa9.44□□□□□ -0.9
SHMT2-210ENST00000553950 LOC107984640A0A0U1RRK4 108 aa9.43□□□□□ -0.9
SHMT2-210ENST00000553950 NDUFC2-KCTD14E9PQ53 114 aa9.43□□□□□ -0.9
SHMT2-210ENST00000553950 C10orf25Q5T742 122 aa9.43□□□□□ -0.9
SHMT2-210ENST00000553950 Q6ZVH6 145 aa9.43□□□□□ -0.9
SHMT2-210ENST00000553950 C9orf163Q8N9P6 203 aa9.43□□□□□ -0.9
SHMT2-210ENST00000553950 PGPEP1Q9NXJ5 209 aa9.43□□□□□ -0.9
SHMT2-210ENST00000553950 DNAH2Q9P225 4427 aa9.42□□□□□ -0.9
SHMT2-210ENST00000553950 HIGD1BQ9P298 99 aa9.42□□□□□ -0.9
SHMT2-210ENST00000553950 DNAH17Q9UFH2 4485 aa9.41□□□□□ -0.9
SHMT2-210ENST00000553950 SLPIP03973 132 aa9.41□□□□□ -0.9
SHMT2-210ENST00000553950 LINC00158P58513 81 aa9.41□□□□□ -0.9
SHMT2-210ENST00000553950 PFN2P35080 140 aa9.4□□□□□ -0.9
SHMT2-210ENST00000553950 RPL18AQ02543 176 aaKnown RBP9.4□□□□□ -0.9
SHMT2-210ENST00000553950 MIEN1Q9BRT3 115 aa9.4□□□□□ -0.9
SHMT2-210ENST00000553950 SPANXDQ9BXN6 97 aa9.4□□□□□ -0.9
SHMT2-210ENST00000553950 SPANXB1Q9NS25 103 aaPredicted RBP9.4□□□□□ -0.9
SHMT2-210ENST00000553950 SPANXCQ9NY87 97 aa9.4□□□□□ -0.9
SHMT2-210ENST00000553950 LINC00474Q9P2X8 69 aa9.4□□□□□ -0.9
SHMT2-210ENST00000553950 SMIM13P0DJ93 91 aa9.39□□□□□ -0.91
SHMT2-210ENST00000553950 HNRNPA3P51991 378 aaKnown RBP9.39□□□□□ -0.91
SHMT2-210ENST00000553950 PPDPFQ9H3Y8 114 aa9.38□□□□□ -0.91
SHMT2-210ENST00000553950 C16orf90A8MZG2 172 aa9.37□□□□□ -0.91
SHMT2-210ENST00000553950 IFITM1P13164 125 aa9.37□□□□□ -0.91
SHMT2-210ENST00000553950 TAL2Q16559 108 aa9.37□□□□□ -0.91
SHMT2-210ENST00000553950 C9orf116Q5BN46 136 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-210ENST00000553950 MIR7-3HGQ8N6C7 128 aa9.37□□□□□ -0.91
SHMT2-210ENST00000553950 LITAFQ99732 161 aa9.37□□□□□ -0.91
SHMT2-210ENST00000553950 PRO1933Q9H354 126 aa9.37□□□□□ -0.91
SHMT2-210ENST00000553950 SRSF9Q13242 221 aaKnown RBP eCLIP9.36□□□□□ -0.91
SHMT2-210ENST00000553950 A0A0U1RRA0 63 aa9.35□□□□□ -0.91
SHMT2-210ENST00000553950 Q6ZRP5 223 aa9.35□□□□□ -0.91
SHMT2-210ENST00000553950 C2orf91Q6ZV80 131 aa9.35□□□□□ -0.91
SHMT2-210ENST00000553950 HIST1H4GQ99525 98 aa9.35□□□□□ -0.91
SHMT2-210ENST00000553950 PTTG1IPP53801 180 aa9.34□□□□□ -0.91
SHMT2-210ENST00000553950 KRTAP10-2P60368 255 aa9.34□□□□□ -0.91
SHMT2-210ENST00000553950 HSD52Q0P140 79 aa9.34□□□□□ -0.91
SHMT2-210ENST00000553950 SND1-IT1Q9HBX3 110 aa9.34□□□□□ -0.91
SHMT2-210ENST00000553950 TP73-AS1Q9UF72 201 aa9.34□□□□□ -0.91
SHMT2-210ENST00000553950 FAT2Q9NYQ8 4349 aa9.33□□□□□ -0.92
SHMT2-210ENST00000553950 A0A1B0GVY2 172 aa9.33□□□□□ -0.92
SHMT2-210ENST00000553950 GAGE2BQ13066 116 aa9.33□□□□□ -0.92
SHMT2-210ENST00000553950 GAGE2EQ4V326 116 aa9.33□□□□□ -0.92
SHMT2-210ENST00000553950 GAGE2DQ9UEU5 116 aa9.33□□□□□ -0.92
SHMT2-210ENST00000553950 LOC107984156A0A0G2JMH3 177 aa9.32□□□□□ -0.92
SHMT2-210ENST00000553950 TMEM238LA0A1B0GVL6 79 aa9.32□□□□□ -0.92
SHMT2-210ENST00000553950 A6NJY4 79 aa9.32□□□□□ -0.92
SHMT2-210ENST00000553950 RPL24P83731 157 aaKnown RBP9.32□□□□□ -0.92
SHMT2-210ENST00000553950 SDIM1Q6ZPB5 146 aa9.32□□□□□ -0.92
SHMT2-210ENST00000553950 ARL17AQ8IVW1 177 aa9.32□□□□□ -0.92
SHMT2-210ENST00000553950 LINC00308Q8TCZ7 52 aa9.32□□□□□ -0.92
SHMT2-210ENST00000553950 A0A096LNI7 61 aa9.31□□□□□ -0.92
SHMT2-210ENST00000553950 ADAMTSL4-AS1Q5T5F5 129 aa9.31□□□□□ -0.92
SHMT2-210ENST00000553950 DAND5Q8N907 189 aa9.31□□□□□ -0.92
SHMT2-210ENST00000553950 IGKV2-24A0A0C4DH68 120 aa9.3□□□□□ -0.92
SHMT2-210ENST00000553950 M0R143 59 aa9.3□□□□□ -0.92
SHMT2-210ENST00000553950 DDTP30046 118 aa9.3□□□□□ -0.92
SHMT2-210ENST00000553950 PLA2G2DQ9UNK4 145 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms