RNA–Protein interactions for RNA: ENST00000553798.5

PSMC6-204, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-204ENST00000553798 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.43□□□□□ -1.22
PSMC6-204ENST00000553798 FAM19A2Q8N3H0 131 aa7.43□□□□□ -1.22
PSMC6-204ENST00000553798 SPACA4Q8TDM5 124 aa7.43□□□□□ -1.22
PSMC6-204ENST00000553798 HIST1H2BHQ93079 126 aa7.43□□□□□ -1.22
PSMC6-204ENST00000553798 HIST1H2BNQ99877 126 aa7.43□□□□□ -1.22
PSMC6-204ENST00000553798 HIST1H2BMQ99879 126 aa7.43□□□□□ -1.22
PSMC6-204ENST00000553798 TRAV12-1A0A0B4J245 112 aa7.42□□□□□ -1.22
PSMC6-204ENST00000553798 NDUFA1O15239 70 aa7.42□□□□□ -1.22
PSMC6-204ENST00000553798 NUPR1O60356 82 aa7.42□□□□□ -1.22
PSMC6-204ENST00000553798 NDUFA6P56556 154 aa7.42□□□□□ -1.22
PSMC6-204ENST00000553798 Q8IZM0 81 aa7.42□□□□□ -1.22
PSMC6-204ENST00000553798 LINC00469Q8N7U9 141 aa7.42□□□□□ -1.22
PSMC6-204ENST00000553798 IFI27L1Q96BM0 104 aa7.42□□□□□ -1.22
PSMC6-204ENST00000553798 DNAH8Q96JB1 4490 aa7.41□□□□□ -1.22
PSMC6-204ENST00000553798 SMIM1B2RUZ4 78 aa7.41□□□□□ -1.22
PSMC6-204ENST00000553798 SMR3BP02814 79 aaPredicted RBP7.41□□□□□ -1.22
PSMC6-204ENST00000553798 CHTF8P0CG12 524 aa7.41□□□□□ -1.22
PSMC6-204ENST00000553798 C10orf25Q5T742 122 aa7.41□□□□□ -1.22
PSMC6-204ENST00000553798 UNQ6190/PRO20217Q6UXQ8 127 aa7.41□□□□□ -1.22
PSMC6-204ENST00000553798 PACRGQ96M98 296 aaPredicted RBP7.41□□□□□ -1.22
PSMC6-204ENST00000553798 KRTAP4-5Q9BYR2 181 aa7.41□□□□□ -1.22
PSMC6-204ENST00000553798 LINC00474Q9P2X8 69 aa7.41□□□□□ -1.22
PSMC6-204ENST00000553798 A0A096LNI7 61 aa7.4□□□□□ -1.22
PSMC6-204ENST00000553798 LOC107984640A0A0U1RRK4 108 aa7.4□□□□□ -1.22
PSMC6-204ENST00000553798 PRSS2P07478 247 aa7.4□□□□□ -1.22
PSMC6-204ENST00000553798 PLAC8Q9NZF1 115 aa7.4□□□□□ -1.22
PSMC6-204ENST00000553798 A0A087WYN8 130 aa7.39□□□□□ -1.23
PSMC6-204ENST00000553798 TRBV30A0A0K0K1B3 111 aa7.39□□□□□ -1.23
PSMC6-204ENST00000553798 EPM2AB3EWF7 344 aa7.39□□□□□ -1.23
PSMC6-204ENST00000553798 H3BRM9 83 aa7.39□□□□□ -1.23
PSMC6-204ENST00000553798 LEPROTL1O95214 131 aa7.39□□□□□ -1.23
PSMC6-204ENST00000553798 TLX1NBP0CAT3 122 aa7.39□□□□□ -1.23
PSMC6-204ENST00000553798 ZNF22P17026 224 aaPredicted RBP7.39□□□□□ -1.23
PSMC6-204ENST00000553798 PTTG1IPP53801 180 aa7.39□□□□□ -1.23
PSMC6-204ENST00000553798 C6orf226Q5I0X4 101 aa7.39□□□□□ -1.23
PSMC6-204ENST00000553798 C2orf82Q6UX34 121 aa7.39□□□□□ -1.23
PSMC6-204ENST00000553798 KRTAP4-7Q9BYR0 210 aa7.39□□□□□ -1.23
PSMC6-204ENST00000553798 C6orf48Q9UBA6 75 aa7.39□□□□□ -1.23
PSMC6-204ENST00000553798 IGKV2-24A0A0C4DH68 120 aa7.38□□□□□ -1.23
PSMC6-204ENST00000553798 IGLV5-39A0A0G2JS06 123 aa7.38□□□□□ -1.23
PSMC6-204ENST00000553798 C11orf86A6NJI1 115 aa7.38□□□□□ -1.23
PSMC6-204ENST00000553798 CKS1BP61024 79 aa7.38□□□□□ -1.23
PSMC6-204ENST00000553798 COA6Q5JTJ3 125 aaKnown RBP7.38□□□□□ -1.23
PSMC6-204ENST00000553798 Q5VSD8 79 aa7.38□□□□□ -1.23
PSMC6-204ENST00000553798 DPH3Q96FX2 82 aa7.38□□□□□ -1.23
PSMC6-204ENST00000553798 TOMM7Q9P0U1 55 aa7.38□□□□□ -1.23
PSMC6-204ENST00000553798 HSPB8Q9UJY1 196 aa7.38□□□□□ -1.23
PSMC6-204ENST00000553798 CHTOPQ9Y3Y2 248 aaKnown RBP7.38□□□□□ -1.23
PSMC6-204ENST00000553798 SRRM2Q9UQ35 2752 aaKnown RBP7.37□□□□□ -1.23
PSMC6-204ENST00000553798 F8VRH5 84 aa7.37□□□□□ -1.23
PSMC6-204ENST00000553798 SPINK8P0C7L1 97 aa7.37□□□□□ -1.23
PSMC6-204ENST00000553798 CXCL5P42830 114 aa7.37□□□□□ -1.23
PSMC6-204ENST00000553798 MAJINQ3KP22 176 aa7.37□□□□□ -1.23
PSMC6-204ENST00000553798 LCE1DQ5T752 114 aa7.37□□□□□ -1.23
PSMC6-204ENST00000553798 COX7B2Q8TF08 81 aa7.37□□□□□ -1.23
PSMC6-204ENST00000553798 ODF1Q14990 250 aa7.36□□□□□ -1.23
PSMC6-204ENST00000553798 NDUFC2-KCTD14E9PQ53 114 aa7.35□□□□□ -1.23
PSMC6-204ENST00000553798 FABP4P15090 132 aa7.35□□□□□ -1.23
PSMC6-204ENST00000553798 GAGE2BQ13066 116 aa7.35□□□□□ -1.23
PSMC6-204ENST00000553798 Q6ZRP5 223 aa7.35□□□□□ -1.23
PSMC6-204ENST00000553798 STPG4Q8N801 248 aa7.35□□□□□ -1.23
PSMC6-204ENST00000553798 PLA2G1BP04054 148 aaKnown RBP7.34□□□□□ -1.23
PSMC6-204ENST00000553798 RPL18AQ02543 176 aaKnown RBP7.34□□□□□ -1.23
PSMC6-204ENST00000553798 TMEM170BQ5T4T1 132 aa7.34□□□□□ -1.23
PSMC6-204ENST00000553798 FAT1Q14517 4588 aa7.34□□□□□ -1.23
PSMC6-204ENST00000553798 TMEM223A0PJW6 202 aa7.33□□□□□ -1.24
PSMC6-204ENST00000553798 KRTAP10-4P60372 401 aaPredicted RBP7.33□□□□□ -1.24
PSMC6-204ENST00000553798 C9orf116Q5BN46 136 aaPredicted RBP7.33□□□□□ -1.24
PSMC6-204ENST00000553798 A0A1W2PNN7 141 aa7.32□□□□□ -1.24
PSMC6-204ENST00000553798 MAP1LC3CQ9BXW4 147 aa7.32□□□□□ -1.24
PSMC6-204ENST00000553798 H0Y8G0 127 aa7.31□□□□□ -1.24
PSMC6-204ENST00000553798 PLNP26678 52 aa7.31□□□□□ -1.24
PSMC6-204ENST00000553798 SFTA2Q6UW10 78 aa7.31□□□□□ -1.24
PSMC6-204ENST00000553798 PCLOQ9Y6V0 5065 aa7.31□□□□□ -1.24
PSMC6-204ENST00000553798 SYS1-DBNDD2H3BUS1 97 aa7.3□□□□□ -1.24
PSMC6-204ENST00000553798 DPM2O94777 84 aa7.3□□□□□ -1.24
PSMC6-204ENST00000553798 GAGE2EQ4V326 116 aa7.3□□□□□ -1.24
PSMC6-204ENST00000553798 ZNF625Q96I27 306 aaPredicted RBP7.3□□□□□ -1.24
PSMC6-204ENST00000553798 GAGE2DQ9UEU5 116 aa7.3□□□□□ -1.24
PSMC6-204ENST00000553798 RPL37AP61513 92 aaKnown RBP7.29□□□□□ -1.24
PSMC6-204ENST00000553798 C9orf129Q5T035 196 aaKnown RBP7.29□□□□□ -1.24
PSMC6-204ENST00000553798 C7orf33Q8WU49 177 aa7.29□□□□□ -1.24
PSMC6-204ENST00000553798 INAFM2P0DMQ5 153 aa7.28□□□□□ -1.24
PSMC6-204ENST00000553798 KRTAP7-1Q8IUC3 87 aa7.28□□□□□ -1.24
PSMC6-204ENST00000553798 ABCA13Q86UQ4 5058 aa7.28□□□□□ -1.24
PSMC6-204ENST00000553798 FAM168BA1KXE4 195 aa7.27□□□□□ -1.25
PSMC6-204ENST00000553798 IGKCP01834 107 aa7.27□□□□□ -1.25
PSMC6-204ENST00000553798 COX17Q14061 63 aa7.27□□□□□ -1.25
PSMC6-204ENST00000553798 LINC01545Q5VT33 79 aa7.27□□□□□ -1.25
PSMC6-204ENST00000553798 PET117Q6UWS5 81 aa7.27□□□□□ -1.25
PSMC6-204ENST00000553798 PMCHL2Q9BQD1 86 aa7.27□□□□□ -1.25
PSMC6-204ENST00000553798 VPS13BQ7Z7G8 4022 aa7.26□□□□□ -1.25
PSMC6-204ENST00000553798 C3orf79P0CE67 100 aa7.26□□□□□ -1.25
PSMC6-204ENST00000553798 XAGE1AQ9HD64 81 aa7.25□□□□□ -1.25
PSMC6-204ENST00000553798 ERG28Q9UKR5 140 aa7.25□□□□□ -1.25
PSMC6-204ENST00000553798 FLG2Q5D862 2391 aaPredicted RBP7.24□□□□□ -1.25
PSMC6-204ENST00000553798 LEPROTO15243 131 aa7.24□□□□□ -1.25
PSMC6-204ENST00000553798 HERVK_113P61574 105 aa7.24□□□□□ -1.25
PSMC6-204ENST00000553798 HERV-K104P63124 156 aa7.24□□□□□ -1.25
PSMC6-204ENST00000553798 PHF5AQ7RTV0 110 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 190 ms