RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 Q6ZSN1 163 aa10.98□□□□□ -0.65
ARHGEF40-202ENST00000553709 LOC107984640A0A0U1RRK4 108 aa10.98□□□□□ -0.65
ARHGEF40-202ENST00000553709 RPL37AP8A6NKH3 93 aa10.97□□□□□ -0.65
ARHGEF40-202ENST00000553709 FAM19A3Q7Z5A8 133 aa10.97□□□□□ -0.65
ARHGEF40-202ENST00000553709 TLN2Q9Y4G6 2542 aa10.97□□□□□ -0.65
ARHGEF40-202ENST00000553709 NTM-AS1Q6ZSK4 140 aa10.97□□□□□ -0.65
ARHGEF40-202ENST00000553709 NDUFC1O43677 76 aa10.97□□□□□ -0.65
ARHGEF40-202ENST00000553709 NANOS2P60321 138 aaKnown RBP10.96□□□□□ -0.65
ARHGEF40-202ENST00000553709 OXLD1Q5BKU9 147 aa10.96□□□□□ -0.65
ARHGEF40-202ENST00000553709 C9orf116Q5BN46 136 aaPredicted RBP10.96□□□□□ -0.66
ARHGEF40-202ENST00000553709 C1orf195Q5TG92 126 aa10.96□□□□□ -0.66
ARHGEF40-202ENST00000553709 SMR3AQ99954 134 aa10.95□□□□□ -0.66
ARHGEF40-202ENST00000553709 SNURFQ9Y675 71 aa10.95□□□□□ -0.66
ARHGEF40-202ENST00000553709 A0A0J9YWU9 116 aa10.95□□□□□ -0.66
ARHGEF40-202ENST00000553709 Q8N814 137 aa10.95□□□□□ -0.66
ARHGEF40-202ENST00000553709 PPDPFQ9H3Y8 114 aa10.95□□□□□ -0.66
ARHGEF40-202ENST00000553709 ABCA12Q86UK0 2595 aa10.95□□□□□ -0.66
ARHGEF40-202ENST00000553709 EGFEM1PQ0D2K5 195 aa10.95□□□□□ -0.66
ARHGEF40-202ENST00000553709 KIF25-AS1Q9Y6Z4 181 aa10.94□□□□□ -0.66
ARHGEF40-202ENST00000553709 A0A087WYN8 130 aa10.93□□□□□ -0.66
ARHGEF40-202ENST00000553709 ATP5EP56381 51 aaPredicted RBP10.93□□□□□ -0.66
ARHGEF40-202ENST00000553709 C16orf95Q9H693 158 aa10.93□□□□□ -0.66
ARHGEF40-202ENST00000553709 TRBV10-3A0A0K0K1G6 114 aa10.92□□□□□ -0.66
ARHGEF40-202ENST00000553709 LRCOL1A6NCL2 159 aa10.92□□□□□ -0.66
ARHGEF40-202ENST00000553709 WFDC13Q8IUB5 93 aa10.92□□□□□ -0.66
ARHGEF40-202ENST00000553709 PRR3P79522 188 aaKnown RBP10.92□□□□□ -0.66
ARHGEF40-202ENST00000553709 CDH23Q9H251 3354 aa10.92□□□□□ -0.66
ARHGEF40-202ENST00000553709 LINC01546A6NGU7 62 aa10.91□□□□□ -0.66
ARHGEF40-202ENST00000553709 JMJD1CQ15652 2540 aa10.91□□□□□ -0.66
ARHGEF40-202ENST00000553709 PKD1L2Q7Z442 2459 aa10.91□□□□□ -0.66
ARHGEF40-202ENST00000553709 TET2Q6N021 2002 aaPredicted RBP10.9□□□□□ -0.66
ARHGEF40-202ENST00000553709 PRUNE2Q8WUY3 3088 aa10.9□□□□□ -0.66
ARHGEF40-202ENST00000553709 SEC61GP60059 68 aa10.9□□□□□ -0.66
ARHGEF40-202ENST00000553709 PRRC2CQ9Y520 2896 aaKnown RBP10.9□□□□□ -0.66
ARHGEF40-202ENST00000553709 USP9YO00507 2555 aaPredicted RBP10.9□□□□□ -0.66
ARHGEF40-202ENST00000553709 COL27A1Q8IZC6 1860 aaPredicted RBP10.89□□□□□ -0.67
ARHGEF40-202ENST00000553709 A0A1B0GUV1 79 aa10.89□□□□□ -0.67
ARHGEF40-202ENST00000553709 ZNF706Q9Y5V0 76 aaPredicted RBP10.89□□□□□ -0.67
ARHGEF40-202ENST00000553709 UNC80Q8N2C7 3258 aa10.89□□□□□ -0.67
ARHGEF40-202ENST00000553709 C7orf33Q8WU49 177 aa10.89□□□□□ -0.67
ARHGEF40-202ENST00000553709 RETNQ9HD89 108 aa10.88□□□□□ -0.67
ARHGEF40-202ENST00000553709 ZNF462Q96JM2 2506 aa10.88□□□□□ -0.67
ARHGEF40-202ENST00000553709 DOPEY1Q5JWR5 2465 aa10.88□□□□□ -0.67
ARHGEF40-202ENST00000553709 SETD2Q9BYW2 2564 aaPredicted RBP10.88□□□□□ -0.67
ARHGEF40-202ENST00000553709 CASC2Q6XLA1 102 aa10.87□□□□□ -0.67
ARHGEF40-202ENST00000553709 M0R2N4 97 aa10.86□□□□□ -0.67
ARHGEF40-202ENST00000553709 LY6G6CO95867 125 aa10.86□□□□□ -0.67
ARHGEF40-202ENST00000553709 A0A087WVE0 104 aa10.86□□□□□ -0.67
ARHGEF40-202ENST00000553709 PLAC8L1A1L4L8 177 aa10.86□□□□□ -0.67
ARHGEF40-202ENST00000553709 LINC00315P59091 139 aa10.85□□□□□ -0.67
ARHGEF40-202ENST00000553709 Q6ZTC4 211 aa10.85□□□□□ -0.67
ARHGEF40-202ENST00000553709 C11orf72Q8NBR9 251 aa10.84□□□□□ -0.67
ARHGEF40-202ENST00000553709 LINC00474Q9P2X8 69 aa10.84□□□□□ -0.67
ARHGEF40-202ENST00000553709 SPINK6Q6UWN8 80 aa10.84□□□□□ -0.67
ARHGEF40-202ENST00000553709 FAM19A4Q96LR4 140 aa10.84□□□□□ -0.67
ARHGEF40-202ENST00000553709 FN1P02751 2386 aaKnown RBP10.84□□□□□ -0.67
ARHGEF40-202ENST00000553709 ZFYVE26Q68DK2 2539 aa10.83□□□□□ -0.68
ARHGEF40-202ENST00000553709 TRAV7A0A075B6U4 112 aa10.83□□□□□ -0.68
ARHGEF40-202ENST00000553709 AGRNO00468 2067 aa10.83□□□□□ -0.68
ARHGEF40-202ENST00000553709 C6orf223Q8N319 242 aa10.83□□□□□ -0.68
ARHGEF40-202ENST00000553709 C1orf137Q5JT78 98 aa10.82□□□□□ -0.68
ARHGEF40-202ENST00000553709 LINC01561Q8N1V8 128 aa10.82□□□□□ -0.68
ARHGEF40-202ENST00000553709 FAM30AQ9NZY2 134 aa10.82□□□□□ -0.68
ARHGEF40-202ENST00000553709 PRR4Q16378 134 aa10.81□□□□□ -0.68
ARHGEF40-202ENST00000553709 IGLV9-49A0A0B4J1Y8 123 aa10.81□□□□□ -0.68
ARHGEF40-202ENST00000553709 IGLV5-39A0A0G2JS06 123 aa10.81□□□□□ -0.68
ARHGEF40-202ENST00000553709 SMIM26A0A096LP01 95 aa10.81□□□□□ -0.68
ARHGEF40-202ENST00000553709 LINC00337Q8N6G1 96 aa10.81□□□□□ -0.68
ARHGEF40-202ENST00000553709 NUPR2A6NF83 97 aa10.8□□□□□ -0.68
ARHGEF40-202ENST00000553709 Q8N2B8 174 aa10.8□□□□□ -0.68
ARHGEF40-202ENST00000553709 CELA1Q9UNI1 258 aa10.8□□□□□ -0.68
ARHGEF40-202ENST00000553709 LRRK2Q5S007 2527 aa10.79□□□□□ -0.68
ARHGEF40-202ENST00000553709 REG3GQ6UW15 175 aa10.79□□□□□ -0.68
ARHGEF40-202ENST00000553709 C10orf25Q5T742 122 aa10.79□□□□□ -0.68
ARHGEF40-202ENST00000553709 LYPD5Q6UWN5 251 aa10.79□□□□□ -0.68
ARHGEF40-202ENST00000553709 C2orf48Q96LS8 159 aa10.78□□□□□ -0.68
ARHGEF40-202ENST00000553709 F8WDY8 70 aa10.78□□□□□ -0.68
ARHGEF40-202ENST00000553709 LINC00575Q6W349 94 aa10.77□□□□□ -0.69
ARHGEF40-202ENST00000553709 TRIOO75962 3097 aa10.76□□□□□ -0.69
ARHGEF40-202ENST00000553709 A6NED7 52 aa10.76□□□□□ -0.69
ARHGEF40-202ENST00000553709 SOSTDC1Q6X4U4 206 aa10.76□□□□□ -0.69
ARHGEF40-202ENST00000553709 Q8N3U1 123 aa10.76□□□□□ -0.69
ARHGEF40-202ENST00000553709 Q8N9L7 120 aa10.76□□□□□ -0.69
ARHGEF40-202ENST00000553709 CDIP1Q9H305 208 aa10.76□□□□□ -0.69
ARHGEF40-202ENST00000553709 LINC00846Q9NV44 126 aa10.75□□□□□ -0.69
ARHGEF40-202ENST00000553709 IGHV3OR16-9A0A0B4J2B5 98 aa10.74□□□□□ -0.69
ARHGEF40-202ENST00000553709 SZT2Q5T011 3432 aa10.74□□□□□ -0.69
ARHGEF40-202ENST00000553709 A8MTW9 85 aa10.73□□□□□ -0.69
ARHGEF40-202ENST00000553709 ZNF292O60281 2723 aa10.73□□□□□ -0.69
ARHGEF40-202ENST00000553709 SERP1Q9Y6X1 66 aa10.73□□□□□ -0.69
ARHGEF40-202ENST00000553709 Q6ZRU5 148 aa10.72□□□□□ -0.69
ARHGEF40-202ENST00000553709 EPG5Q9HCE0 2579 aa10.72□□□□□ -0.69
ARHGEF40-202ENST00000553709 PMAIP1Q13794 54 aa10.71□□□□□ -0.69
ARHGEF40-202ENST00000553709 PRR15LQ9BU68 103 aa10.71□□□□□ -0.69
ARHGEF40-202ENST00000553709 PRYO14603 147 aa10.71□□□□□ -0.69
ARHGEF40-202ENST00000553709 Q6ZVQ6 151 aa10.71□□□□□ -0.69
ARHGEF40-202ENST00000553709 IGLV5-45A0A087WSX0 123 aa10.71□□□□□ -0.7
ARHGEF40-202ENST00000553709 SMCPP49901 116 aaPredicted RBP10.7□□□□□ -0.7
ARHGEF40-202ENST00000553709 TRBV7-7A0A0K0K1E9 115 aa10.69□□□□□ -0.7
ARHGEF40-202ENST00000553709 LINC00208Q96KT6 92 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms