RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 SPINK8P0C7L1 97 aa14.45□□□□□ -0.1
TDP1-206ENST00000553569 Q8IZM0 81 aa14.45□□□□□ -0.1
TDP1-206ENST00000553569 IFI27L1Q96BM0 104 aa14.45□□□□□ -0.1
TDP1-206ENST00000553569 PLAC8Q9NZF1 115 aa14.45□□□□□ -0.1
TDP1-206ENST00000553569 CKS1BP61024 79 aa14.44□□□□□ -0.1
TDP1-206ENST00000553569 C6orf226Q5I0X4 101 aa14.44□□□□□ -0.1
TDP1-206ENST00000553569 H3BRM9 83 aa14.43□□□□□ -0.1
TDP1-206ENST00000553569 PCLOQ9Y6V0 5065 aa14.42□□□□□ -0.1
TDP1-206ENST00000553569 TRBV30A0A0K0K1B3 111 aa14.41□□□□□ -0.1
TDP1-206ENST00000553569 INAFM2P0DMQ5 153 aa14.41□□□□□ -0.1
TDP1-206ENST00000553569 ZNF22P17026 224 aaPredicted RBP14.41□□□□□ -0.1
TDP1-206ENST00000553569 NUPR1O60356 82 aa14.4□□□□□ -0.1
TDP1-206ENST00000553569 RPL37AP61513 92 aaKnown RBP14.4□□□□□ -0.1
TDP1-206ENST00000553569 COX7B2Q8TF08 81 aa14.4□□□□□ -0.1
TDP1-206ENST00000553569 CHTOPQ9Y3Y2 248 aaKnown RBP14.4□□□□□ -0.1
TDP1-206ENST00000553569 C11orf86A6NJI1 115 aa14.39□□□□□ -0.11
TDP1-206ENST00000553569 C9orf116Q5BN46 136 aaPredicted RBP14.39□□□□□ -0.11
TDP1-206ENST00000553569 TLX1NBP0CAT3 122 aa14.38□□□□□ -0.11
TDP1-206ENST00000553569 VPS13BQ7Z7G8 4022 aa14.38□□□□□ -0.11
TDP1-206ENST00000553569 H0Y8G0 127 aa14.37□□□□□ -0.11
TDP1-206ENST00000553569 HIST1H2BKO60814 126 aa14.37□□□□□ -0.11
TDP1-206ENST00000553569 LEPROTL1O95214 131 aa14.37□□□□□ -0.11
TDP1-206ENST00000553569 HIST1H2BJP06899 126 aa14.37□□□□□ -0.11
TDP1-206ENST00000553569 HIST1H2BOP23527 126 aa14.37□□□□□ -0.11
TDP1-206ENST00000553569 HIST1H2BBP33778 126 aa14.37□□□□□ -0.11
TDP1-206ENST00000553569 HIST1H2BDP58876 126 aa14.37□□□□□ -0.11
TDP1-206ENST00000553569 HIST1H2BCP62807 126 aa14.37□□□□□ -0.11
TDP1-206ENST00000553569 HIST2H2BEQ16778 126 aa14.37□□□□□ -0.11
TDP1-206ENST00000553569 GAGE2EQ4V326 116 aa14.37□□□□□ -0.11
TDP1-206ENST00000553569 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.37□□□□□ -0.11
TDP1-206ENST00000553569 Q6ZRP5 223 aa14.37□□□□□ -0.11
TDP1-206ENST00000553569 HIST1H2BHQ93079 126 aa14.37□□□□□ -0.11
TDP1-206ENST00000553569 HIST1H2BNQ99877 126 aa14.37□□□□□ -0.11
TDP1-206ENST00000553569 HIST1H2BMQ99879 126 aa14.37□□□□□ -0.11
TDP1-206ENST00000553569 GAGE2DQ9UEU5 116 aa14.37□□□□□ -0.11
TDP1-206ENST00000553569 TRAV12-1A0A0B4J245 112 aa14.36□□□□□ -0.11
TDP1-206ENST00000553569 F8VRH5 84 aa14.36□□□□□ -0.11
TDP1-206ENST00000553569 ATP6V1G1O75348 118 aa14.36□□□□□ -0.11
TDP1-206ENST00000553569 CXCL5P42830 114 aa14.36□□□□□ -0.11
TDP1-206ENST00000553569 TMEM170BQ5T4T1 132 aa14.36□□□□□ -0.11
TDP1-206ENST00000553569 C7orf33Q8WU49 177 aa14.35□□□□□ -0.11
TDP1-206ENST00000553569 A0A1W2PNN7 141 aa14.34□□□□□ -0.11
TDP1-206ENST00000553569 FABP4P15090 132 aa14.34□□□□□ -0.11
TDP1-206ENST00000553569 S100A1P23297 94 aa14.34□□□□□ -0.11
TDP1-206ENST00000553569 KRTAP10-4P60372 401 aaPredicted RBP14.34□□□□□ -0.11
TDP1-206ENST00000553569 NDUFC2-KCTD14E9PQ53 114 aa14.33□□□□□ -0.12
TDP1-206ENST00000553569 IGLV5-39A0A0G2JS06 123 aa14.32□□□□□ -0.12
TDP1-206ENST00000553569 HSPB8Q9UJY1 196 aa14.32□□□□□ -0.12
TDP1-206ENST00000553569 FAM168BA1KXE4 195 aa14.29□□□□□ -0.12
TDP1-206ENST00000553569 ODF1Q14990 250 aa14.29□□□□□ -0.12
TDP1-206ENST00000553569 SRRM2Q9UQ35 2752 aaKnown RBP14.28□□□□□ -0.12
TDP1-206ENST00000553569 FAM19A5Q7Z5A7 132 aaPredicted RBP14.28□□□□□ -0.12
TDP1-206ENST00000553569 C9orf129Q5T035 196 aaKnown RBP14.26□□□□□ -0.13
TDP1-206ENST00000553569 TMEM223A0PJW6 202 aa14.25□□□□□ -0.13
TDP1-206ENST00000553569 FLG2Q5D862 2391 aaPredicted RBP14.25□□□□□ -0.13
TDP1-206ENST00000553569 PHF5AQ7RTV0 110 aaKnown RBP14.24□□□□□ -0.13
TDP1-206ENST00000553569 XAGE1AQ9HD64 81 aa14.24□□□□□ -0.13
TDP1-206ENST00000553569 HNRNPA3P51991 378 aaKnown RBP14.23□□□□□ -0.13
TDP1-206ENST00000553569 PMCHL2Q9BQD1 86 aa14.23□□□□□ -0.13
TDP1-206ENST00000553569 PRR3P79522 188 aaKnown RBP14.22□□□□□ -0.13
TDP1-206ENST00000553569 MAP1LC3CQ9BXW4 147 aa14.22□□□□□ -0.13
TDP1-206ENST00000553569 PLNP26678 52 aa14.2□□□□□ -0.14
TDP1-206ENST00000553569 ZNF625Q96I27 306 aaPredicted RBP14.2□□□□□ -0.14
TDP1-206ENST00000553569 M0QXV9 152 aa14.19□□□□□ -0.14
TDP1-206ENST00000553569 PFN2P35080 140 aa14.19□□□□□ -0.14
TDP1-206ENST00000553569 KRTAP7-1Q8IUC3 87 aa14.19□□□□□ -0.14
TDP1-206ENST00000553569 DPM2O94777 84 aa14.18□□□□□ -0.14
TDP1-206ENST00000553569 COA6Q5JTJ3 125 aaKnown RBP14.18□□□□□ -0.14
TDP1-206ENST00000553569 SERTAD4-AS1Q5TG53 156 aa14.17□□□□□ -0.14
TDP1-206ENST00000553569 ERG28Q9UKR5 140 aa14.17□□□□□ -0.14
TDP1-206ENST00000553569 IGKCP01834 107 aa14.16□□□□□ -0.14
TDP1-206ENST00000553569 SFTA2Q6UW10 78 aa14.16□□□□□ -0.14
TDP1-206ENST00000553569 SYS1-DBNDD2H3BUS1 97 aa14.14□□□□□ -0.15
TDP1-206ENST00000553569 PSORS1C2Q9UIG4 136 aa14.13□□□□□ -0.15
TDP1-206ENST00000553569 HERVK_113P61574 105 aa14.12□□□□□ -0.15
TDP1-206ENST00000553569 UBE2BP63146 152 aa14.12□□□□□ -0.15
TDP1-206ENST00000553569 PKHD1L1Q86WI1 4243 aa14.11□□□□□ -0.15
TDP1-206ENST00000553569 TSPEAR-AS2P59090 65 aa14.1□□□□□ -0.15
TDP1-206ENST00000553569 COX17Q14061 63 aa14.1□□□□□ -0.15
TDP1-206ENST00000553569 KRTAP11-1Q8IUC1 163 aa14.1□□□□□ -0.15
TDP1-206ENST00000553569 C22orf24Q9Y442 160 aa14.1□□□□□ -0.15
TDP1-206ENST00000553569 LEPROTO15243 131 aa14.09□□□□□ -0.15
TDP1-206ENST00000553569 C1orf137Q5JT78 98 aa14.09□□□□□ -0.15
TDP1-206ENST00000553569 PLEKHB2Q96CS7 222 aa14.09□□□□□ -0.15
TDP1-206ENST00000553569 NDUFA12Q9UI09 145 aa14.09□□□□□ -0.15
TDP1-206ENST00000553569 MYCBP2O75592 4640 aa14.09□□□□□ -0.15
TDP1-206ENST00000553569 A0A0U1RRA0 63 aa14.08□□□□□ -0.16
TDP1-206ENST00000553569 C3orf79P0CE67 100 aa14.08□□□□□ -0.16
TDP1-206ENST00000553569 LINC00158P58513 81 aa14.08□□□□□ -0.16
TDP1-206ENST00000553569 SND1-IT1Q9HBX3 110 aa14.08□□□□□ -0.16
TDP1-206ENST00000553569 KRTDAPP60985 99 aa14.07□□□□□ -0.16
TDP1-206ENST00000553569 MEIG1Q5JSS6 88 aa14.07□□□□□ -0.16
TDP1-206ENST00000553569 PET117Q6UWS5 81 aa14.07□□□□□ -0.16
TDP1-206ENST00000553569 LINC01545Q5VT33 79 aa14.06□□□□□ -0.16
TDP1-206ENST00000553569 MYMXA0A1B0GTQ4 84 aa14.05□□□□□ -0.16
TDP1-206ENST00000553569 J3QL48 77 aa14.05□□□□□ -0.16
TDP1-206ENST00000553569 J3QQQ9 107 aa14.05□□□□□ -0.16
TDP1-206ENST00000553569 HERV-K104P63124 156 aa14.05□□□□□ -0.16
TDP1-206ENST00000553569 LBHQ53QV2 105 aaPredicted RBP14.05□□□□□ -0.16
TDP1-206ENST00000553569 MRPL55Q7Z7F7 128 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms