RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 IGLC3P0DOY3 106 aa7.46□□□□□ -1.22
TRAFD1-209ENST00000552896 LINC00310P59036 64 aa7.46□□□□□ -1.22
TRAFD1-209ENST00000552896 C21orf62-AS1Q17RA5 79 aa7.46□□□□□ -1.22
TRAFD1-209ENST00000552896 Q8IZM0 81 aa7.46□□□□□ -1.22
TRAFD1-209ENST00000552896 IGKV2-24A0A0C4DH68 120 aa7.45□□□□□ -1.22
TRAFD1-209ENST00000552896 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.45□□□□□ -1.22
TRAFD1-209ENST00000552896 SMIM1B2RUZ4 78 aa7.45□□□□□ -1.22
TRAFD1-209ENST00000552896 FAM229AH3BQW9 127 aa7.45□□□□□ -1.22
TRAFD1-209ENST00000552896 PRSS2P07478 247 aa7.45□□□□□ -1.22
TRAFD1-209ENST00000552896 TRBV30A0A0K0K1B3 111 aa7.44□□□□□ -1.22
TRAFD1-209ENST00000552896 H3BRM9 83 aa7.44□□□□□ -1.22
TRAFD1-209ENST00000552896 PTTG1IPP53801 180 aa7.44□□□□□ -1.22
TRAFD1-209ENST00000552896 NDUFA6P56556 154 aa7.44□□□□□ -1.22
TRAFD1-209ENST00000552896 MAJINQ3KP22 176 aa7.44□□□□□ -1.22
TRAFD1-209ENST00000552896 IFI27L1Q96BM0 104 aa7.44□□□□□ -1.22
TRAFD1-209ENST00000552896 PLAC8Q9NZF1 115 aa7.44□□□□□ -1.22
TRAFD1-209ENST00000552896 A0A087WYN8 130 aa7.43□□□□□ -1.22
TRAFD1-209ENST00000552896 TRAV12-1A0A0B4J245 112 aa7.43□□□□□ -1.22
TRAFD1-209ENST00000552896 KRTAP9-6A0A140TA67 174 aa7.43□□□□□ -1.22
TRAFD1-209ENST00000552896 PLA2G1BP04054 148 aaKnown RBP7.43□□□□□ -1.22
TRAFD1-209ENST00000552896 S100A1P23297 94 aa7.43□□□□□ -1.22
TRAFD1-209ENST00000552896 CXCL5P42830 114 aa7.43□□□□□ -1.22
TRAFD1-209ENST00000552896 C10orf25Q5T742 122 aa7.43□□□□□ -1.22
TRAFD1-209ENST00000552896 C2orf82Q6UX34 121 aa7.43□□□□□ -1.22
TRAFD1-209ENST00000552896 UNQ6190/PRO20217Q6UXQ8 127 aa7.43□□□□□ -1.22
TRAFD1-209ENST00000552896 FAM19A2Q8N3H0 131 aa7.43□□□□□ -1.22
TRAFD1-209ENST00000552896 TOMM7Q9P0U1 55 aa7.43□□□□□ -1.22
TRAFD1-209ENST00000552896 C6orf48Q9UBA6 75 aa7.43□□□□□ -1.22
TRAFD1-209ENST00000552896 HIST1H2BKO60814 126 aa7.42□□□□□ -1.22
TRAFD1-209ENST00000552896 ATP6V1G1O75348 118 aa7.42□□□□□ -1.22
TRAFD1-209ENST00000552896 HIST1H2BJP06899 126 aa7.42□□□□□ -1.22
TRAFD1-209ENST00000552896 TLX1NBP0CAT3 122 aa7.42□□□□□ -1.22
TRAFD1-209ENST00000552896 ZNF22P17026 224 aaPredicted RBP7.42□□□□□ -1.22
TRAFD1-209ENST00000552896 HIST1H2BOP23527 126 aa7.42□□□□□ -1.22
TRAFD1-209ENST00000552896 HIST1H2BBP33778 126 aa7.42□□□□□ -1.22
TRAFD1-209ENST00000552896 HIST1H2BDP58876 126 aa7.42□□□□□ -1.22
TRAFD1-209ENST00000552896 CKS1BP61024 79 aa7.42□□□□□ -1.22
TRAFD1-209ENST00000552896 HIST1H2BCP62807 126 aa7.42□□□□□ -1.22
TRAFD1-209ENST00000552896 RPL18AQ02543 176 aaKnown RBP7.42□□□□□ -1.22
TRAFD1-209ENST00000552896 HIST2H2BEQ16778 126 aa7.42□□□□□ -1.22
TRAFD1-209ENST00000552896 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.42□□□□□ -1.22
TRAFD1-209ENST00000552896 HIST1H2BHQ93079 126 aa7.42□□□□□ -1.22
TRAFD1-209ENST00000552896 HIST1H2BNQ99877 126 aa7.42□□□□□ -1.22
TRAFD1-209ENST00000552896 HIST1H2BMQ99879 126 aa7.42□□□□□ -1.22
TRAFD1-209ENST00000552896 LEPROTL1O95214 131 aa7.41□□□□□ -1.22
TRAFD1-209ENST00000552896 SPINK8P0C7L1 97 aa7.41□□□□□ -1.22
TRAFD1-209ENST00000552896 C6orf226Q5I0X4 101 aa7.41□□□□□ -1.22
TRAFD1-209ENST00000552896 STPG4Q8N801 248 aa7.41□□□□□ -1.22
TRAFD1-209ENST00000552896 COX7B2Q8TF08 81 aa7.41□□□□□ -1.22
TRAFD1-209ENST00000552896 CHTOPQ9Y3Y2 248 aaKnown RBP7.41□□□□□ -1.22
TRAFD1-209ENST00000552896 PKHD1L1Q86WI1 4243 aa7.4□□□□□ -1.22
TRAFD1-209ENST00000552896 IGLV5-39A0A0G2JS06 123 aa7.4□□□□□ -1.22
TRAFD1-209ENST00000552896 C11orf86A6NJI1 115 aa7.4□□□□□ -1.22
TRAFD1-209ENST00000552896 F8VRH5 84 aa7.4□□□□□ -1.22
TRAFD1-209ENST00000552896 GAGE2BQ13066 116 aa7.4□□□□□ -1.22
TRAFD1-209ENST00000552896 DPH3Q96FX2 82 aa7.4□□□□□ -1.22
TRAFD1-209ENST00000552896 HSPB8Q9UJY1 196 aa7.4□□□□□ -1.22
TRAFD1-209ENST00000552896 NDUFC2-KCTD14E9PQ53 114 aa7.39□□□□□ -1.23
TRAFD1-209ENST00000552896 NUPR1O60356 82 aa7.39□□□□□ -1.23
TRAFD1-209ENST00000552896 KRTAP10-4P60372 401 aaPredicted RBP7.38□□□□□ -1.23
TRAFD1-209ENST00000552896 RPL37AP61513 92 aaKnown RBP7.38□□□□□ -1.23
TRAFD1-209ENST00000552896 TMEM170BQ5T4T1 132 aa7.38□□□□□ -1.23
TRAFD1-209ENST00000552896 Q6ZRP5 223 aa7.38□□□□□ -1.23
TRAFD1-209ENST00000552896 C7orf33Q8WU49 177 aa7.38□□□□□ -1.23
TRAFD1-209ENST00000552896 ODF1Q14990 250 aa7.37□□□□□ -1.23
TRAFD1-209ENST00000552896 C9orf116Q5BN46 136 aaPredicted RBP7.37□□□□□ -1.23
TRAFD1-209ENST00000552896 FLG2Q5D862 2391 aaPredicted RBP7.36□□□□□ -1.23
TRAFD1-209ENST00000552896 MYCBP2O75592 4640 aa7.35□□□□□ -1.23
TRAFD1-209ENST00000552896 H0Y8G0 127 aa7.35□□□□□ -1.23
TRAFD1-209ENST00000552896 INAFM2P0DMQ5 153 aa7.35□□□□□ -1.23
TRAFD1-209ENST00000552896 FABP4P15090 132 aa7.35□□□□□ -1.23
TRAFD1-209ENST00000552896 PLNP26678 52 aa7.35□□□□□ -1.23
TRAFD1-209ENST00000552896 GAGE2EQ4V326 116 aa7.35□□□□□ -1.23
TRAFD1-209ENST00000552896 COA6Q5JTJ3 125 aaKnown RBP7.35□□□□□ -1.23
TRAFD1-209ENST00000552896 SFTA2Q6UW10 78 aa7.35□□□□□ -1.23
TRAFD1-209ENST00000552896 GAGE2DQ9UEU5 116 aa7.35□□□□□ -1.23
TRAFD1-209ENST00000552896 TMEM223A0PJW6 202 aa7.34□□□□□ -1.23
TRAFD1-209ENST00000552896 A0A1W2PNN7 141 aa7.33□□□□□ -1.24
TRAFD1-209ENST00000552896 C9orf129Q5T035 196 aaKnown RBP7.33□□□□□ -1.24
TRAFD1-209ENST00000552896 MAP1LC3CQ9BXW4 147 aa7.33□□□□□ -1.24
TRAFD1-209ENST00000552896 DPM2O94777 84 aa7.32□□□□□ -1.24
TRAFD1-209ENST00000552896 PRR3P79522 188 aaKnown RBP7.32□□□□□ -1.24
TRAFD1-209ENST00000552896 FAM168BA1KXE4 195 aa7.31□□□□□ -1.24
TRAFD1-209ENST00000552896 FAM19A5Q7Z5A7 132 aaPredicted RBP7.31□□□□□ -1.24
TRAFD1-209ENST00000552896 ZNF625Q96I27 306 aaPredicted RBP7.31□□□□□ -1.24
TRAFD1-209ENST00000552896 IGKCP01834 107 aa7.3□□□□□ -1.24
TRAFD1-209ENST00000552896 COX17Q14061 63 aa7.3□□□□□ -1.24
TRAFD1-209ENST00000552896 SVIPQ8NHG7 77 aa7.3□□□□□ -1.24
TRAFD1-209ENST00000552896 SYS1-DBNDD2H3BUS1 97 aa7.29□□□□□ -1.24
TRAFD1-209ENST00000552896 M0QXV9 152 aa7.29□□□□□ -1.24
TRAFD1-209ENST00000552896 GHRHP01286 108 aa7.29□□□□□ -1.24
TRAFD1-209ENST00000552896 LCE3BQ5TA77 95 aa7.29□□□□□ -1.24
TRAFD1-209ENST00000552896 KRTAP7-1Q8IUC3 87 aa7.29□□□□□ -1.24
TRAFD1-209ENST00000552896 XAGE1AQ9HD64 81 aa7.29□□□□□ -1.24
TRAFD1-209ENST00000552896 ERG28Q9UKR5 140 aa7.29□□□□□ -1.24
TRAFD1-209ENST00000552896 DMBT1Q9UGM3 2413 aaPredicted RBP7.28□□□□□ -1.24
TRAFD1-209ENST00000552896 HERVK_113P61574 105 aa7.28□□□□□ -1.24
TRAFD1-209ENST00000552896 PHF5AQ7RTV0 110 aaKnown RBP7.28□□□□□ -1.24
TRAFD1-209ENST00000552896 KRTAP4-12Q9BQ66 201 aa7.28□□□□□ -1.24
TRAFD1-209ENST00000552896 PMCHL2Q9BQD1 86 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms