RNA–Protein interactions for RNA: ENST00000552561.5

TMEM106C-220, Transcript of transmembrane protein 106C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM106C, Length 810 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-220ENST00000552561 FSIP2Q5CZC0 6907 aa2.82□□□□□ -1.96
TMEM106C-220ENST00000552561 IGLV4-69A0A075B6H9 119 aa2.82□□□□□ -1.96
TMEM106C-220ENST00000552561 TRAV12-1A0A0B4J245 112 aa2.82□□□□□ -1.96
TMEM106C-220ENST00000552561 USP17L23D6RBM5 183 aa2.82□□□□□ -1.96
TMEM106C-220ENST00000552561 TSTD3H0UI37 97 aa2.82□□□□□ -1.96
TMEM106C-220ENST00000552561 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.82□□□□□ -1.96
TMEM106C-220ENST00000552561 DPM2O94777 84 aa2.82□□□□□ -1.96
TMEM106C-220ENST00000552561 IGKCP01834 107 aa2.82□□□□□ -1.96
TMEM106C-220ENST00000552561 IGLC3P0DOY3 106 aa2.82□□□□□ -1.96
TMEM106C-220ENST00000552561 DDTP30046 118 aa2.82□□□□□ -1.96
TMEM106C-220ENST00000552561 HNRNPA3P51991 378 aaKnown RBP2.82□□□□□ -1.96
TMEM106C-220ENST00000552561 RPL37AP61513 92 aaKnown RBP2.82□□□□□ -1.96
TMEM106C-220ENST00000552561 RBX1P62877 108 aa2.82□□□□□ -1.96
TMEM106C-220ENST00000552561 COTL1Q14019 142 aa2.82□□□□□ -1.96
TMEM106C-220ENST00000552561 LINC01620Q4KN68 170 aa2.82□□□□□ -1.96
TMEM106C-220ENST00000552561 RNASE13Q5GAN3 156 aaKnown RBP2.82□□□□□ -1.96
TMEM106C-220ENST00000552561 Q6ZN92 141 aa2.82□□□□□ -1.96
TMEM106C-220ENST00000552561 Q6ZUT4 128 aa2.82□□□□□ -1.96
TMEM106C-220ENST00000552561 ERASQ7Z444 233 aa2.82□□□□□ -1.96
TMEM106C-220ENST00000552561 TMEM141Q96I45 108 aa2.82□□□□□ -1.96
TMEM106C-220ENST00000552561 PLAC8Q9NZF1 115 aa2.82□□□□□ -1.96
TMEM106C-220ENST00000552561 UBE2D4Q9Y2X8 147 aa2.82□□□□□ -1.96
TMEM106C-220ENST00000552561 CHTOPQ9Y3Y2 248 aaKnown RBP2.82□□□□□ -1.96
TMEM106C-220ENST00000552561 TRBV25-1A0A075B6N4 114 aa2.81□□□□□ -1.96
TMEM106C-220ENST00000552561 IGKV2D-26A0A0A0MRZ7 120 aa2.81□□□□□ -1.96
TMEM106C-220ENST00000552561 C11orf86A6NJI1 115 aa2.81□□□□□ -1.96
TMEM106C-220ENST00000552561 F8VRH5 84 aa2.81□□□□□ -1.96
TMEM106C-220ENST00000552561 PANO1I0J062 215 aa2.81□□□□□ -1.96
TMEM106C-220ENST00000552561 CRPP02741 224 aa2.81□□□□□ -1.96
TMEM106C-220ENST00000552561 SLPIP03973 132 aa2.81□□□□□ -1.96
TMEM106C-220ENST00000552561 FGF6P10767 208 aa2.81□□□□□ -1.96
TMEM106C-220ENST00000552561 PMVKQ15126 192 aa2.81□□□□□ -1.96
TMEM106C-220ENST00000552561 STPG4Q8N801 248 aa2.81□□□□□ -1.96
TMEM106C-220ENST00000552561 SPACA4Q8TDM5 124 aa2.81□□□□□ -1.96
TMEM106C-220ENST00000552561 C14orf144Q96I85 54 aa2.81□□□□□ -1.96
TMEM106C-220ENST00000552561 AMELXQ99217 191 aa2.81□□□□□ -1.96
TMEM106C-220ENST00000552561 CST9LQ9H4G1 147 aa2.81□□□□□ -1.96
TMEM106C-220ENST00000552561 SPANXA1Q9NS26 97 aa2.81□□□□□ -1.96
TMEM106C-220ENST00000552561 PYGO1Q9Y3Y4 419 aa2.81□□□□□ -1.96
TMEM106C-220ENST00000552561 IGLV10-54A0A075B6I4 117 aa2.8□□□□□ -1.96
TMEM106C-220ENST00000552561 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.8□□□□□ -1.96
TMEM106C-220ENST00000552561 A0A0J9YXV3 536 aa2.8□□□□□ -1.96
TMEM106C-220ENST00000552561 LINC01549A6NIU2 74 aa2.8□□□□□ -1.96
TMEM106C-220ENST00000552561 HSBP1L1C9JCN9 74 aa2.8□□□□□ -1.96
TMEM106C-220ENST00000552561 H7C423 109 aa2.8□□□□□ -1.96
TMEM106C-220ENST00000552561 ANGP03950 147 aaKnown RBP2.8□□□□□ -1.96
TMEM106C-220ENST00000552561 PLNP26678 52 aa2.8□□□□□ -1.96
TMEM106C-220ENST00000552561 G0S2P27469 103 aa2.8□□□□□ -1.96
TMEM106C-220ENST00000552561 REG3AQ06141 175 aa2.8□□□□□ -1.96
TMEM106C-220ENST00000552561 GAGE6Q13070 117 aa2.8□□□□□ -1.96
TMEM106C-220ENST00000552561 MRPL52Q86TS9 123 aaKnown RBP2.8□□□□□ -1.96
TMEM106C-220ENST00000552561 PCP2Q8IVA1 136 aa2.8□□□□□ -1.96
TMEM106C-220ENST00000552561 LINC00269Q8N2A0 174 aa2.8□□□□□ -1.96
TMEM106C-220ENST00000552561 LINC01600Q96MT4 127 aa2.8□□□□□ -1.96
TMEM106C-220ENST00000552561 MIEN1Q9BRT3 115 aa2.8□□□□□ -1.96
TMEM106C-220ENST00000552561 TMEM243Q9BU79 118 aa2.8□□□□□ -1.96
TMEM106C-220ENST00000552561 TTTY13Q9BZ97 58 aa2.8□□□□□ -1.96
TMEM106C-220ENST00000552561 UQCR10Q9UDW1 63 aa2.8□□□□□ -1.96
TMEM106C-220ENST00000552561 A0A087WYN8 130 aa2.79□□□□□ -1.96
TMEM106C-220ENST00000552561 GVQW2A0A096LPI5 108 aaPredicted RBP2.79□□□□□ -1.96
TMEM106C-220ENST00000552561 TMEM262E9PQX1 116 aa2.79□□□□□ -1.96
TMEM106C-220ENST00000552561 NPSP0C0P6 89 aa2.79□□□□□ -1.96
TMEM106C-220ENST00000552561 COX8AP10176 69 aa2.79□□□□□ -1.96
TMEM106C-220ENST00000552561 ZNF22P17026 224 aaPredicted RBP2.79□□□□□ -1.96
TMEM106C-220ENST00000552561 NMUP48645 174 aa2.79□□□□□ -1.96
TMEM106C-220ENST00000552561 TSPEAR-AS2P59090 65 aa2.79□□□□□ -1.96
TMEM106C-220ENST00000552561 KRTAP10-8P60410 259 aa2.79□□□□□ -1.96
TMEM106C-220ENST00000552561 MRPS36P82909 103 aaKnown RBP2.79□□□□□ -1.96
TMEM106C-220ENST00000552561 SLC25A34Q6PIV7 304 aa2.79□□□□□ -1.96
TMEM106C-220ENST00000552561 C2orf91Q6ZV80 131 aa2.79□□□□□ -1.96
TMEM106C-220ENST00000552561 C15orf56Q8N910 161 aa2.79□□□□□ -1.96
TMEM106C-220ENST00000552561 CHCHD5Q9BSY4 110 aa2.79□□□□□ -1.96
TMEM106C-220ENST00000552561 TIMM21Q9BVV7 248 aa2.79□□□□□ -1.96
TMEM106C-220ENST00000552561 IGLV4-60A0A075B6I1 120 aa2.78□□□□□ -1.96
TMEM106C-220ENST00000552561 IGHV3-64A0A075B6Q5 118 aa2.78□□□□□ -1.96
TMEM106C-220ENST00000552561 TMEM223A0PJW6 202 aa2.78□□□□□ -1.96
TMEM106C-220ENST00000552561 UBE2L6O14933 153 aa2.78□□□□□ -1.96
TMEM106C-220ENST00000552561 ZNF25P17030 456 aaPredicted RBP2.78□□□□□ -1.96
TMEM106C-220ENST00000552561 UBE2D1P51668 147 aa2.78□□□□□ -1.96
TMEM106C-220ENST00000552561 CTAG1AP78358 180 aa2.78□□□□□ -1.96
TMEM106C-220ENST00000552561 SRSF9Q13242 221 aaKnown RBP eCLIP2.78□□□□□ -1.96
TMEM106C-220ENST00000552561 AMMECR1LQ6DCA0 310 aa2.78□□□□□ -1.96
TMEM106C-220ENST00000552561 BOD1L2Q8IYS8 172 aa2.78□□□□□ -1.96
TMEM106C-220ENST00000552561 SNHG12Q9BXW3 62 aa2.78□□□□□ -1.96
TMEM106C-220ENST00000552561 VCX2Q9H322 139 aa2.78□□□□□ -1.96
TMEM106C-220ENST00000552561 PKIGQ9Y2B9 76 aa2.78□□□□□ -1.96
TMEM106C-220ENST00000552561 CSDC2Q9Y534 153 aaKnown RBP2.78□□□□□ -1.96
TMEM106C-220ENST00000552561 IGLV5-45A0A087WSX0 123 aa2.77□□□□□ -1.97
TMEM106C-220ENST00000552561 TRAV13-1A0A0B4J241 112 aa2.77□□□□□ -1.97
TMEM106C-220ENST00000552561 TINCRA0A1B0GVN0 87 aa2.77□□□□□ -1.97
TMEM106C-220ENST00000552561 E9PLD3 99 aa2.77□□□□□ -1.97
TMEM106C-220ENST00000552561 COX6A2Q02221 97 aa2.77□□□□□ -1.97
TMEM106C-220ENST00000552561 PAPPA-AS1Q5QFB9 102 aa2.77□□□□□ -1.97
TMEM106C-220ENST00000552561 TMEM170BQ5T4T1 132 aa2.77□□□□□ -1.97
TMEM106C-220ENST00000552561 LINC00242Q5T6M2 205 aa2.77□□□□□ -1.97
TMEM106C-220ENST00000552561 CFAP161Q6P656 301 aa2.77□□□□□ -1.97
TMEM106C-220ENST00000552561 FAM19A3Q7Z5A8 133 aa2.77□□□□□ -1.97
TMEM106C-220ENST00000552561 LINC00469Q8N7U9 141 aa2.77□□□□□ -1.97
TMEM106C-220ENST00000552561 OR5A1Q8NGJ0 315 aa2.77□□□□□ -1.97
TMEM106C-220ENST00000552561 C2orf88Q9BSF0 95 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms