RNA–Protein interactions for RNA: ENST00000551594.1

CTDSP2-207, Transcript of CTD small phosphatase 2, humanhuman

TSL 3

Gene CTDSP2, Length 900 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-207ENST00000551594 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.03□□□□□ -0.48
CTDSP2-207ENST00000551594 F8WDY8 70 aa12.02□□□□□ -0.49
CTDSP2-207ENST00000551594 CHTF8P0CG12 524 aa12.02□□□□□ -0.49
CTDSP2-207ENST00000551594 COX7B2Q8TF08 81 aa12.02□□□□□ -0.49
CTDSP2-207ENST00000551594 C6orf48Q9UBA6 75 aa12.02□□□□□ -0.49
CTDSP2-207ENST00000551594 IGLV5-39A0A0G2JS06 123 aa12□□□□□ -0.49
CTDSP2-207ENST00000551594 SYS1-DBNDD2H3BUS1 97 aa12□□□□□ -0.49
CTDSP2-207ENST00000551594 CKS1BP61024 79 aa12□□□□□ -0.49
CTDSP2-207ENST00000551594 A0A096LNI7 61 aa11.99□□□□□ -0.49
CTDSP2-207ENST00000551594 IGKV2-24A0A0C4DH68 120 aa11.99□□□□□ -0.49
CTDSP2-207ENST00000551594 RNF151Q2KHN1 245 aa11.99□□□□□ -0.49
CTDSP2-207ENST00000551594 TMEM223A0PJW6 202 aa11.98□□□□□ -0.49
CTDSP2-207ENST00000551594 C9orf116Q5BN46 136 aaPredicted RBP11.98□□□□□ -0.49
CTDSP2-207ENST00000551594 SCXQ7RTU7 201 aa11.98□□□□□ -0.49
CTDSP2-207ENST00000551594 HIST3H2BBQ8N257 126 aa11.98□□□□□ -0.49
CTDSP2-207ENST00000551594 KRTAP17-1Q9BYP8 105 aa11.98□□□□□ -0.49
CTDSP2-207ENST00000551594 LOC107984640A0A0U1RRK4 108 aa11.97□□□□□ -0.49
CTDSP2-207ENST00000551594 DPM2O94777 84 aa11.97□□□□□ -0.49
CTDSP2-207ENST00000551594 S100A6P06703 90 aa11.97□□□□□ -0.49
CTDSP2-207ENST00000551594 C3orf79P0CE67 100 aa11.97□□□□□ -0.49
CTDSP2-207ENST00000551594 GAGE2BQ13066 116 aa11.97□□□□□ -0.49
CTDSP2-207ENST00000551594 TRBV30A0A0K0K1B3 111 aa11.96□□□□□ -0.49
CTDSP2-207ENST00000551594 KRTDAPP60985 99 aa11.96□□□□□ -0.49
CTDSP2-207ENST00000551594 RPL18AQ02543 176 aaKnown RBP11.96□□□□□ -0.49
CTDSP2-207ENST00000551594 CIRBP-AS1Q8TBR5 109 aa11.96□□□□□ -0.49
CTDSP2-207ENST00000551594 DPH3Q96FX2 82 aa11.96□□□□□ -0.49
CTDSP2-207ENST00000551594 HERC2O95714 4834 aa11.96□□□□□ -0.5
CTDSP2-207ENST00000551594 IGKCP01834 107 aa11.95□□□□□ -0.5
CTDSP2-207ENST00000551594 SMR3BP02814 79 aaPredicted RBP11.95□□□□□ -0.5
CTDSP2-207ENST00000551594 PLNP26678 52 aa11.95□□□□□ -0.5
CTDSP2-207ENST00000551594 SNRPEP62304 92 aaKnown RBP11.95□□□□□ -0.5
CTDSP2-207ENST00000551594 CIRBPQ14011 172 aaKnown RBP11.95□□□□□ -0.5
CTDSP2-207ENST00000551594 MAJINQ3KP22 176 aa11.95□□□□□ -0.5
CTDSP2-207ENST00000551594 SPACA4Q8TDM5 124 aa11.95□□□□□ -0.5
CTDSP2-207ENST00000551594 PTTG1IPP53801 180 aa11.94□□□□□ -0.5
CTDSP2-207ENST00000551594 PET117Q6UWS5 81 aa11.94□□□□□ -0.5
CTDSP2-207ENST00000551594 CXCL5P42830 114 aa11.93□□□□□ -0.5
CTDSP2-207ENST00000551594 LINC01545Q5VT33 79 aa11.93□□□□□ -0.5
CTDSP2-207ENST00000551594 HIST1H2BLQ99880 126 aa11.93□□□□□ -0.5
CTDSP2-207ENST00000551594 PKIGQ9Y2B9 76 aa11.93□□□□□ -0.5
CTDSP2-207ENST00000551594 S100A2P29034 98 aa11.92□□□□□ -0.5
CTDSP2-207ENST00000551594 Q6ZRP5 223 aa11.92□□□□□ -0.5
CTDSP2-207ENST00000551594 A0A087WYN8 130 aa11.91□□□□□ -0.5
CTDSP2-207ENST00000551594 TLX1NBP0CAT3 122 aa11.91□□□□□ -0.5
CTDSP2-207ENST00000551594 GAGE2EQ4V326 116 aa11.91□□□□□ -0.5
CTDSP2-207ENST00000551594 GAGE2DQ9UEU5 116 aa11.91□□□□□ -0.5
CTDSP2-207ENST00000551594 FAT1Q14517 4588 aa11.9□□□□□ -0.5
CTDSP2-207ENST00000551594 C5orf52A6NGY3 159 aa11.89□□□□□ -0.51
CTDSP2-207ENST00000551594 NDUFC2-KCTD14E9PQ53 114 aa11.89□□□□□ -0.51
CTDSP2-207ENST00000551594 STPG4Q8N801 248 aa11.89□□□□□ -0.51
CTDSP2-207ENST00000551594 ZNF625Q96I27 306 aaPredicted RBP11.88□□□□□ -0.51
CTDSP2-207ENST00000551594 LINC00474Q9P2X8 69 aa11.88□□□□□ -0.51
CTDSP2-207ENST00000551594 TSPEAR-AS2P59090 65 aa11.87□□□□□ -0.51
CTDSP2-207ENST00000551594 PLAC8Q9NZF1 115 aa11.87□□□□□ -0.51
CTDSP2-207ENST00000551594 VPS13BQ7Z7G8 4022 aa11.86□□□□□ -0.51
CTDSP2-207ENST00000551594 A0A1W2PNN7 141 aa11.86□□□□□ -0.51
CTDSP2-207ENST00000551594 LEPROTO15243 131 aa11.86□□□□□ -0.51
CTDSP2-207ENST00000551594 HERVK_113P61574 105 aa11.85□□□□□ -0.51
CTDSP2-207ENST00000551594 Q8N1X5 172 aa11.85□□□□□ -0.51
CTDSP2-207ENST00000551594 FAM168BA1KXE4 195 aa11.84□□□□□ -0.51
CTDSP2-207ENST00000551594 PFN2P35080 140 aa11.84□□□□□ -0.51
CTDSP2-207ENST00000551594 C9orf129Q5T035 196 aaKnown RBP11.84□□□□□ -0.51
CTDSP2-207ENST00000551594 C20orf202A1L168 122 aa11.83□□□□□ -0.52
CTDSP2-207ENST00000551594 ATOH7Q8N100 152 aa11.83□□□□□ -0.52
CTDSP2-207ENST00000551594 LINC00528Q8N1L1 170 aa11.83□□□□□ -0.52
CTDSP2-207ENST00000551594 PLEKHB2Q96CS7 222 aa11.83□□□□□ -0.52
CTDSP2-207ENST00000551594 KRTAP4-5Q9BYR2 181 aa11.83□□□□□ -0.52
CTDSP2-207ENST00000551594 XAGE1AQ9HD64 81 aa11.83□□□□□ -0.52
CTDSP2-207ENST00000551594 NDUFA12Q9UI09 145 aa11.83□□□□□ -0.52
CTDSP2-207ENST00000551594 J3QQQ9 107 aa11.82□□□□□ -0.52
CTDSP2-207ENST00000551594 ERG28Q9UKR5 140 aa11.82□□□□□ -0.52
CTDSP2-207ENST00000551594 TMA7Q9Y2S6 64 aaKnown RBP11.82□□□□□ -0.52
CTDSP2-207ENST00000551594 E9PLD3 99 aa11.81□□□□□ -0.52
CTDSP2-207ENST00000551594 Q5VSD8 79 aa11.8□□□□□ -0.52
CTDSP2-207ENST00000551594 SFTA2Q6UW10 78 aa11.8□□□□□ -0.52
CTDSP2-207ENST00000551594 A0A0U1RRA0 63 aa11.79□□□□□ -0.52
CTDSP2-207ENST00000551594 EPM2AB3EWF7 344 aa11.79□□□□□ -0.52
CTDSP2-207ENST00000551594 LGALS3P17931 250 aaKnown RBP11.79□□□□□ -0.52
CTDSP2-207ENST00000551594 FAM19A5Q7Z5A7 132 aaPredicted RBP11.79□□□□□ -0.52
CTDSP2-207ENST00000551594 KRTAP7-1Q8IUC3 87 aa11.79□□□□□ -0.52
CTDSP2-207ENST00000551594 MYMXA0A1B0GTQ4 84 aa11.78□□□□□ -0.52
CTDSP2-207ENST00000551594 FAM229AH3BQW9 127 aa11.78□□□□□ -0.52
CTDSP2-207ENST00000551594 SRRM2Q9UQ35 2752 aaKnown RBP11.78□□□□□ -0.52
CTDSP2-207ENST00000551594 IGKV2D-26A0A0A0MRZ7 120 aa11.77□□□□□ -0.53
CTDSP2-207ENST00000551594 SMIM13P0DJ93 91 aa11.77□□□□□ -0.53
CTDSP2-207ENST00000551594 LINC00158P58513 81 aa11.77□□□□□ -0.53
CTDSP2-207ENST00000551594 HERV-K104P63124 156 aa11.76□□□□□ -0.53
CTDSP2-207ENST00000551594 COX17Q14061 63 aa11.76□□□□□ -0.53
CTDSP2-207ENST00000551594 ANKRD39Q53RE8 183 aa11.76□□□□□ -0.53
CTDSP2-207ENST00000551594 MEIG1Q5JSS6 88 aa11.76□□□□□ -0.53
CTDSP2-207ENST00000551594 SERTAD4-AS1Q5TG53 156 aa11.76□□□□□ -0.53
CTDSP2-207ENST00000551594 PHF5AQ7RTV0 110 aaKnown RBP11.76□□□□□ -0.53
CTDSP2-207ENST00000551594 NMUP48645 174 aa11.75□□□□□ -0.53
CTDSP2-207ENST00000551594 SND1-IT1Q9HBX3 110 aa11.75□□□□□ -0.53
CTDSP2-207ENST00000551594 SCGB1D1O95968 90 aa11.73□□□□□ -0.53
CTDSP2-207ENST00000551594 TTTY13Q9BZ97 58 aa11.73□□□□□ -0.53
CTDSP2-207ENST00000551594 AKR1D1P51857 326 aa11.72□□□□□ -0.53
CTDSP2-207ENST00000551594 RPL37AP61513 92 aaKnown RBP11.72□□□□□ -0.53
CTDSP2-207ENST00000551594 C7orf33Q8WU49 177 aa11.72□□□□□ -0.53
CTDSP2-207ENST00000551594 M0QXV9 152 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms