RNA–Protein interactions for RNA: ENST00000551551.1

ATXN2-223, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,256 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-223	ENST00000551551	C6orf226	Q5I0X4	101 aa		5.72	□□□□□ -1.49
ATXN2-223	ENST00000551551	C10orf91	Q5T1B1	145 aa		5.72	□□□□□ -1.49
ATXN2-223	ENST00000551551	LCE1D	Q5T752	114 aa		5.72	□□□□□ -1.49
ATXN2-223	ENST00000551551	REG3G	Q6UW15	175 aa		5.72	□□□□□ -1.49
ATXN2-223	ENST00000551551	SPINK6	Q6UWN8	80 aa		5.72	□□□□□ -1.49
ATXN2-223	ENST00000551551	SVBP	Q8N300	66 aa		5.72	□□□□□ -1.49
ATXN2-223	ENST00000551551	TOMM6	Q96B49	74 aa		5.72	□□□□□ -1.49
ATXN2-223	ENST00000551551	KRTAP4-7	Q9BYR0	210 aa		5.72	□□□□□ -1.49
ATXN2-223	ENST00000551551	CARHSP1	Q9Y2V2	147 aa	Known RBP	5.72	□□□□□ -1.49
ATXN2-223	ENST00000551551	LINC01546	A6NGU7	62 aa		5.71	□□□□□ -1.5
ATXN2-223	ENST00000551551	IGIP	A6NJ69	53 aa		5.71	□□□□□ -1.5
ATXN2-223	ENST00000551551	UBE2D1	P51668	147 aa		5.71	□□□□□ -1.5
ATXN2-223	ENST00000551551	GAGE2B	Q13066	116 aa		5.71	□□□□□ -1.5
ATXN2-223	ENST00000551551	LINC00242	Q5T6M2	205 aa		5.71	□□□□□ -1.5
ATXN2-223	ENST00000551551	SFTA2	Q6UW10	78 aa		5.71	□□□□□ -1.5
ATXN2-223	ENST00000551551	SCGB3A1	Q96QR1	104 aa		5.71	□□□□□ -1.5
ATXN2-223	ENST00000551551	HERC1	Q15751	4861 aa		5.71	□□□□□ -1.5
ATXN2-223	ENST00000551551		A0A096LNI7	61 aa		5.7	□□□□□ -1.5
ATXN2-223	ENST00000551551	KRTAP10-4	P60372	401 aa	Predicted RBP	5.7	□□□□□ -1.5
ATXN2-223	ENST00000551551	RNASE13	Q5GAN3	156 aa	Known RBP	5.7	□□□□□ -1.5
ATXN2-223	ENST00000551551	FA2H	Q7L5A8	372 aa		5.7	□□□□□ -1.5
ATXN2-223	ENST00000551551	COMMD7	Q86VX2	200 aa		5.7	□□□□□ -1.5
ATXN2-223	ENST00000551551		Q8IZM0	81 aa		5.7	□□□□□ -1.5
ATXN2-223	ENST00000551551	ALKBH7	Q9BT30	221 aa	Predicted RBP	5.7	□□□□□ -1.5
ATXN2-223	ENST00000551551	RPS10P5	Q9NQ39	176 aa		5.7	□□□□□ -1.5
ATXN2-223	ENST00000551551	NDUFC2-KCTD14	E9PQ53	114 aa		5.69	□□□□□ -1.5
ATXN2-223	ENST00000551551	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	5.69	□□□□□ -1.5
ATXN2-223	ENST00000551551		H3BRM9	83 aa		5.69	□□□□□ -1.5
ATXN2-223	ENST00000551551	CHTF8	P0CG12	524 aa		5.69	□□□□□ -1.5
ATXN2-223	ENST00000551551	IFITM2	Q01629	132 aa		5.69	□□□□□ -1.5
ATXN2-223	ENST00000551551	RPL18A	Q02543	176 aa	Known RBP	5.69	□□□□□ -1.5
ATXN2-223	ENST00000551551	FABP9	Q0Z7S8	132 aa		5.69	□□□□□ -1.5
ATXN2-223	ENST00000551551	GAGE2E	Q4V326	116 aa		5.69	□□□□□ -1.5
ATXN2-223	ENST00000551551	GAGE2A	Q6NT46	116 aa		5.69	□□□□□ -1.5
ATXN2-223	ENST00000551551	GAGE2D	Q9UEU5	116 aa		5.69	□□□□□ -1.5
ATXN2-223	ENST00000551551	TINCR	A0A1B0GVN0	87 aa		5.68	□□□□□ -1.5
ATXN2-223	ENST00000551551	PANO1	I0J062	215 aa		5.68	□□□□□ -1.5
ATXN2-223	ENST00000551551	PDZD11	Q5EBL8	140 aa		5.68	□□□□□ -1.5
ATXN2-223	ENST00000551551	PCP4L1	A6NKN8	68 aa		5.67	□□□□□ -1.5
ATXN2-223	ENST00000551551	ATP5L	O75964	103 aa		5.67	□□□□□ -1.5
ATXN2-223	ENST00000551551	LINC00614	P0C842	121 aa		5.67	□□□□□ -1.5
ATXN2-223	ENST00000551551	HERV-K104	P63124	156 aa		5.67	□□□□□ -1.5
ATXN2-223	ENST00000551551	PRR3	P79522	188 aa	Known RBP	5.67	□□□□□ -1.5
ATXN2-223	ENST00000551551	PMVK	Q15126	192 aa		5.67	□□□□□ -1.5
ATXN2-223	ENST00000551551	C9orf116	Q5BN46	136 aa	Predicted RBP	5.67	□□□□□ -1.5
ATXN2-223	ENST00000551551	FAM104A	Q969W3	186 aa		5.67	□□□□□ -1.5
ATXN2-223	ENST00000551551	LINC00526	Q96FQ7	95 aa		5.67	□□□□□ -1.5
ATXN2-223	ENST00000551551	OPRPN	Q99935	248 aa	Predicted RBP	5.67	□□□□□ -1.5
ATXN2-223	ENST00000551551	TRAPPC1	Q9Y5R8	145 aa		5.67	□□□□□ -1.5
ATXN2-223	ENST00000551551	HSBP1L1	C9JCN9	74 aa		5.66	□□□□□ -1.5
ATXN2-223	ENST00000551551		F8VRH5	84 aa		5.66	□□□□□ -1.5
ATXN2-223	ENST00000551551	ADCYAP1	P18509	176 aa		5.66	□□□□□ -1.5
ATXN2-223	ENST00000551551	VPS13B	Q7Z7G8	4022 aa		5.66	□□□□□ -1.5
ATXN2-223	ENST00000551551	APOC3	P02656	99 aa		5.65	□□□□□ -1.5
ATXN2-223	ENST00000551551	KIAA0087	Q14695	138 aa		5.65	□□□□□ -1.5
ATXN2-223	ENST00000551551	KIAA1644	Q3SXP7	199 aa		5.65	□□□□□ -1.5
ATXN2-223	ENST00000551551	UNQ6190/PRO20217	Q6UXQ8	127 aa		5.65	□□□□□ -1.5
ATXN2-223	ENST00000551551	LINC00469	Q8N7U9	141 aa		5.65	□□□□□ -1.5
ATXN2-223	ENST00000551551	LINC01600	Q96MT4	127 aa		5.65	□□□□□ -1.5
ATXN2-223	ENST00000551551	CST9L	Q9H4G1	147 aa		5.65	□□□□□ -1.5
ATXN2-223	ENST00000551551	FAT1	Q14517	4588 aa		5.65	□□□□□ -1.51
ATXN2-223	ENST00000551551	LINC00587	B1AMM8	73 aa		5.64	□□□□□ -1.51
ATXN2-223	ENST00000551551	SRSF9	Q13242	221 aa	Known RBP eCLIP	5.64	□□□□□ -1.51
ATXN2-223	ENST00000551551	COX17	Q14061	63 aa		5.64	□□□□□ -1.51
ATXN2-223	ENST00000551551	DIRC1	Q969H9	104 aa		5.64	□□□□□ -1.51
ATXN2-223	ENST00000551551	TOMM7	Q9P0U1	55 aa		5.64	□□□□□ -1.51
ATXN2-223	ENST00000551551	DMBT1	Q9UGM3	2413 aa	Predicted RBP	5.64	□□□□□ -1.51
ATXN2-223	ENST00000551551	IGLV5-45	A0A087WSX0	123 aa		5.63	□□□□□ -1.51
ATXN2-223	ENST00000551551		A0A0J9YXV3	536 aa		5.63	□□□□□ -1.51
ATXN2-223	ENST00000551551	HBD	P02042	147 aa		5.63	□□□□□ -1.51
ATXN2-223	ENST00000551551	LINC00173	Q6ZV60	143 aa		5.63	□□□□□ -1.51
ATXN2-223	ENST00000551551	CHCHD1	Q96BP2	118 aa	Known RBP	5.63	□□□□□ -1.51
ATXN2-223	ENST00000551551	C6orf48	Q9UBA6	75 aa		5.63	□□□□□ -1.51
ATXN2-223	ENST00000551551	TP73-AS1	Q9UF72	201 aa		5.63	□□□□□ -1.51
ATXN2-223	ENST00000551551	CDKN2A-AS1	Q9UH64	79 aa		5.63	□□□□□ -1.51
ATXN2-223	ENST00000551551	DNAH8	Q96JB1	4490 aa		5.63	□□□□□ -1.51
ATXN2-223	ENST00000551551		A0A1W2PNN7	141 aa		5.62	□□□□□ -1.51
ATXN2-223	ENST00000551551	NUPR1	O60356	82 aa		5.62	□□□□□ -1.51
ATXN2-223	ENST00000551551	UBE2B	P63146	152 aa		5.61	□□□□□ -1.51
ATXN2-223	ENST00000551551	C1orf137	Q5JT78	98 aa		5.61	□□□□□ -1.51
ATXN2-223	ENST00000551551	COX7B2	Q8TF08	81 aa		5.61	□□□□□ -1.51
ATXN2-223	ENST00000551551	FLG2	Q5D862	2391 aa	Predicted RBP	5.6	□□□□□ -1.51
ATXN2-223	ENST00000551551	C10orf25	Q5T742	122 aa		5.6	□□□□□ -1.51
ATXN2-223	ENST00000551551	C18orf32	Q8TCD1	76 aa		5.6	□□□□□ -1.51
ATXN2-223	ENST00000551551	PSORS1C2	Q9UIG4	136 aa		5.6	□□□□□ -1.51
ATXN2-223	ENST00000551551		M0QXV9	152 aa		5.59	□□□□□ -1.51
ATXN2-223	ENST00000551551	IGLV7-43	P04211	117 aa		5.59	□□□□□ -1.51
ATXN2-223	ENST00000551551	S100A6	P06703	90 aa		5.59	□□□□□ -1.51
ATXN2-223	ENST00000551551	IGLC3	P0DOY3	106 aa		5.59	□□□□□ -1.51
ATXN2-223	ENST00000551551	RPL13A	P40429	203 aa	Known RBP	5.59	□□□□□ -1.51
ATXN2-223	ENST00000551551	NDUFA6	P56556	154 aa		5.59	□□□□□ -1.51
ATXN2-223	ENST00000551551	SEC61G	P60059	68 aa		5.59	□□□□□ -1.51
ATXN2-223	ENST00000551551	RPL24	P83731	157 aa	Known RBP	5.59	□□□□□ -1.51
ATXN2-223	ENST00000551551	C2orf82	Q6UX34	121 aa		5.59	□□□□□ -1.51
ATXN2-223	ENST00000551551	SMIM1	B2RUZ4	78 aa		5.58	□□□□□ -1.52
ATXN2-223	ENST00000551551	IGLV1-50	A0A075B6I6	118 aa		5.57	□□□□□ -1.52
ATXN2-223	ENST00000551551	TRAV12-1	A0A0B4J245	112 aa		5.57	□□□□□ -1.52
ATXN2-223	ENST00000551551	HNRNPA3	P51991	378 aa	Known RBP	5.57	□□□□□ -1.52
ATXN2-223	ENST00000551551	PHF5A	Q7RTV0	110 aa	Known RBP	5.57	□□□□□ -1.52
ATXN2-223	ENST00000551551	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	5.57	□□□□□ -1.52

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