RNA–Protein interactions for RNA: ENST00000551269.1

PRPF40B-213, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-213ENST00000551269 ATOH7Q8N100 152 aa7.62□□□□□ -1.19
PRPF40B-213ENST00000551269 PLEKHB2Q96CS7 222 aa7.62□□□□□ -1.19
PRPF40B-213ENST00000551269 PKHD1P08F94 4074 aa7.61□□□□□ -1.19
PRPF40B-213ENST00000551269 TRBV30A0A0K0K1B3 111 aa7.61□□□□□ -1.19
PRPF40B-213ENST00000551269 HSBP1L1C9JCN9 74 aa7.61□□□□□ -1.19
PRPF40B-213ENST00000551269 LEPROTO15243 131 aa7.61□□□□□ -1.19
PRPF40B-213ENST00000551269 LGALS3P17931 250 aaKnown RBP7.61□□□□□ -1.19
PRPF40B-213ENST00000551269 GCSHP23434 173 aa7.61□□□□□ -1.19
PRPF40B-213ENST00000551269 C2orf82Q6UX34 121 aa7.61□□□□□ -1.19
PRPF40B-213ENST00000551269 DNAH11Q96DT5 4516 aa7.61□□□□□ -1.19
PRPF40B-213ENST00000551269 E9PLD3 99 aa7.6□□□□□ -1.19
PRPF40B-213ENST00000551269 UNQ6190/PRO20217Q6UXQ8 127 aa7.6□□□□□ -1.19
PRPF40B-213ENST00000551269 C9orf163Q8N9P6 203 aa7.6□□□□□ -1.19
PRPF40B-213ENST00000551269 SLPIP03973 132 aa7.59□□□□□ -1.19
PRPF40B-213ENST00000551269 RPL18AQ02543 176 aaKnown RBP7.59□□□□□ -1.19
PRPF40B-213ENST00000551269 LINC01620Q4KN68 170 aa7.59□□□□□ -1.19
PRPF40B-213ENST00000551269 C6orf48Q9UBA6 75 aa7.59□□□□□ -1.19
PRPF40B-213ENST00000551269 LOC107984640A0A0U1RRK4 108 aa7.58□□□□□ -1.2
PRPF40B-213ENST00000551269 J3QQQ9 107 aa7.58□□□□□ -1.2
PRPF40B-213ENST00000551269 RNF151Q2KHN1 245 aa7.58□□□□□ -1.2
PRPF40B-213ENST00000551269 C10orf25Q5T742 122 aa7.58□□□□□ -1.2
PRPF40B-213ENST00000551269 STPG4Q8N801 248 aa7.58□□□□□ -1.2
PRPF40B-213ENST00000551269 MYMXA0A1B0GTQ4 84 aa7.57□□□□□ -1.2
PRPF40B-213ENST00000551269 NMUP48645 174 aa7.57□□□□□ -1.2
PRPF40B-213ENST00000551269 TSPEAR-AS2P59090 65 aa7.57□□□□□ -1.2
PRPF40B-213ENST00000551269 HERV-K104P63124 156 aa7.57□□□□□ -1.2
PRPF40B-213ENST00000551269 NDUFA12Q9UI09 145 aa7.57□□□□□ -1.2
PRPF40B-213ENST00000551269 DNAH5Q8TE73 4624 aa7.57□□□□□ -1.2
PRPF40B-213ENST00000551269 JOSD1Q15040 202 aaPredicted RBP7.56□□□□□ -1.2
PRPF40B-213ENST00000551269 MEIG1Q5JSS6 88 aa7.56□□□□□ -1.2
PRPF40B-213ENST00000551269 ZNF625Q96I27 306 aaPredicted RBP7.56□□□□□ -1.2
PRPF40B-213ENST00000551269 IGKV2-24A0A0C4DH68 120 aa7.55□□□□□ -1.2
PRPF40B-213ENST00000551269 ERG28Q9UKR5 140 aa7.55□□□□□ -1.2
PRPF40B-213ENST00000551269 ZNF815PA8K554 130 aa7.54□□□□□ -1.2
PRPF40B-213ENST00000551269 NDUFC2-KCTD14E9PQ53 114 aa7.54□□□□□ -1.2
PRPF40B-213ENST00000551269 TLX1NBP0CAT3 122 aa7.54□□□□□ -1.2
PRPF40B-213ENST00000551269 KRTAP10-1P60331 282 aa7.54□□□□□ -1.2
PRPF40B-213ENST00000551269 GAGE2BQ13066 116 aa7.54□□□□□ -1.2
PRPF40B-213ENST00000551269 ANKRD39Q53RE8 183 aa7.54□□□□□ -1.2
PRPF40B-213ENST00000551269 C9orf116Q5BN46 136 aaPredicted RBP7.54□□□□□ -1.2
PRPF40B-213ENST00000551269 VAMP8Q9BV40 100 aa7.54□□□□□ -1.2
PRPF40B-213ENST00000551269 A0A096LNI7 61 aa7.53□□□□□ -1.2
PRPF40B-213ENST00000551269 IGKV2D-26A0A0A0MRZ7 120 aa7.53□□□□□ -1.2
PRPF40B-213ENST00000551269 LINC00587B1AMM8 73 aa7.53□□□□□ -1.2
PRPF40B-213ENST00000551269 PFN2P35080 140 aa7.53□□□□□ -1.2
PRPF40B-213ENST00000551269 MAJINQ3KP22 176 aa7.53□□□□□ -1.2
PRPF40B-213ENST00000551269 LINC00474Q9P2X8 69 aa7.53□□□□□ -1.2
PRPF40B-213ENST00000551269 CHTF8P0CG12 524 aa7.52□□□□□ -1.21
PRPF40B-213ENST00000551269 PTTG1IPP53801 180 aa7.52□□□□□ -1.21
PRPF40B-213ENST00000551269 COX17Q14061 63 aa7.52□□□□□ -1.21
PRPF40B-213ENST00000551269 GAGE2EQ4V326 116 aa7.52□□□□□ -1.21
PRPF40B-213ENST00000551269 SDIM1Q6ZPB5 146 aa7.52□□□□□ -1.21
PRPF40B-213ENST00000551269 GAGE2DQ9UEU5 116 aa7.52□□□□□ -1.21
PRPF40B-213ENST00000551269 PAM16Q9Y3D7 125 aa7.52□□□□□ -1.21
PRPF40B-213ENST00000551269 LINC00158P58513 81 aa7.51□□□□□ -1.21
PRPF40B-213ENST00000551269 CIRBPQ14011 172 aaKnown RBP7.51□□□□□ -1.21
PRPF40B-213ENST00000551269 PYY3Q5JQD4 70 aa7.51□□□□□ -1.21
PRPF40B-213ENST00000551269 SCGB1D4Q6XE38 83 aa7.51□□□□□ -1.21
PRPF40B-213ENST00000551269 Q6ZRP5 223 aa7.51□□□□□ -1.21
PRPF40B-213ENST00000551269 DPH3Q96FX2 82 aa7.51□□□□□ -1.21
PRPF40B-213ENST00000551269 A0A0U1RRA0 63 aa7.5□□□□□ -1.21
PRPF40B-213ENST00000551269 SMIM13P0DJ93 91 aa7.5□□□□□ -1.21
PRPF40B-213ENST00000551269 SPATA45Q537H7 98 aa7.5□□□□□ -1.21
PRPF40B-213ENST00000551269 SPACA4Q8TDM5 124 aa7.5□□□□□ -1.21
PRPF40B-213ENST00000551269 Q6ZSA8 131 aa7.49□□□□□ -1.21
PRPF40B-213ENST00000551269 TTTY13Q9BZ97 58 aa7.49□□□□□ -1.21
PRPF40B-213ENST00000551269 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.49□□□□□ -1.21
PRPF40B-213ENST00000551269 DYNC1H1Q14204 4646 aaKnown RBP7.49□□□□□ -1.21
PRPF40B-213ENST00000551269 A0A0J9YXY3 114 aa7.48□□□□□ -1.21
PRPF40B-213ENST00000551269 S100A12P80511 92 aa7.48□□□□□ -1.21
PRPF40B-213ENST00000551269 PCP2Q8IVA1 136 aa7.48□□□□□ -1.21
PRPF40B-213ENST00000551269 MIEN1Q9BRT3 115 aa7.48□□□□□ -1.21
PRPF40B-213ENST00000551269 XAGE1AQ9HD64 81 aa7.48□□□□□ -1.21
PRPF40B-213ENST00000551269 EPPK1P58107 5090 aaKnown RBP7.47□□□□□ -1.21
PRPF40B-213ENST00000551269 TMEM238C9JI98 176 aa7.47□□□□□ -1.21
PRPF40B-213ENST00000551269 SCXQ7RTU7 201 aa7.47□□□□□ -1.21
PRPF40B-213ENST00000551269 MIR7-3HGQ8N6C7 128 aa7.47□□□□□ -1.21
PRPF40B-213ENST00000551269 FAM30AQ9NZY2 134 aa7.47□□□□□ -1.21
PRPF40B-213ENST00000551269 LRP1BQ9NZR2 4599 aa7.46□□□□□ -1.21
PRPF40B-213ENST00000551269 PANO1I0J062 215 aa7.46□□□□□ -1.22
PRPF40B-213ENST00000551269 TIMM17BO60830 172 aa7.46□□□□□ -1.22
PRPF40B-213ENST00000551269 SMIM6P0DI80 62 aa7.46□□□□□ -1.22
PRPF40B-213ENST00000551269 HAMPP81172 84 aa7.46□□□□□ -1.22
PRPF40B-213ENST00000551269 FAM19A5Q7Z5A7 132 aaPredicted RBP7.46□□□□□ -1.22
PRPF40B-213ENST00000551269 SND1-IT1Q9HBX3 110 aa7.46□□□□□ -1.22
PRPF40B-213ENST00000551269 A0A087WYN8 130 aa7.45□□□□□ -1.22
PRPF40B-213ENST00000551269 COX8AP10176 69 aa7.45□□□□□ -1.22
PRPF40B-213ENST00000551269 C9orf129Q5T035 196 aaKnown RBP7.45□□□□□ -1.22
PRPF40B-213ENST00000551269 LOC105371267A0A1B0GV96 52 aa7.44□□□□□ -1.22
PRPF40B-213ENST00000551269 CDK2AP2O75956 126 aa7.44□□□□□ -1.22
PRPF40B-213ENST00000551269 DAND5Q8N907 189 aa7.44□□□□□ -1.22
PRPF40B-213ENST00000551269 DNAH8Q96JB1 4490 aa7.44□□□□□ -1.22
PRPF40B-213ENST00000551269 M0QXV9 152 aa7.43□□□□□ -1.22
PRPF40B-213ENST00000551269 NPC2P61916 151 aa7.43□□□□□ -1.22
PRPF40B-213ENST00000551269 SLC25A34Q6PIV7 304 aa7.43□□□□□ -1.22
PRPF40B-213ENST00000551269 NKAPP1Q8N9T2 125 aa7.43□□□□□ -1.22
PRPF40B-213ENST00000551269 CIRBP-AS1Q8TBR5 109 aa7.43□□□□□ -1.22
PRPF40B-213ENST00000551269 COPS9Q8WXC6 57 aa7.43□□□□□ -1.22
PRPF40B-213ENST00000551269 PLAC8Q9NZF1 115 aa7.43□□□□□ -1.22
PRPF40B-213ENST00000551269 FAM168BA1KXE4 195 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms