RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 ZNF22P17026 224 aaPredicted RBP8.62□□□□□ -1.03
NUP188-211ENST00000550219 LINC00469Q8N7U9 141 aa8.62□□□□□ -1.03
NUP188-211ENST00000550219 OR10D4PQ8NGN7 298 aa8.62□□□□□ -1.03
NUP188-211ENST00000550219 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.62□□□□□ -1.03
NUP188-211ENST00000550219 hDV102S1A0JD36 115 aa8.61□□□□□ -1.03
NUP188-211ENST00000550219 DPM2O94777 84 aa8.61□□□□□ -1.03
NUP188-211ENST00000550219 PLNP26678 52 aa8.61□□□□□ -1.03
NUP188-211ENST00000550219 C15orf56Q8N910 161 aa8.61□□□□□ -1.03
NUP188-211ENST00000550219 C9orf163Q8N9P6 203 aa8.61□□□□□ -1.03
NUP188-211ENST00000550219 PMCHL2Q9BQD1 86 aa8.61□□□□□ -1.03
NUP188-211ENST00000550219 IGHV3-64A0A075B6Q5 118 aa8.6□□□□□ -1.03
NUP188-211ENST00000550219 IGHV1-58A0A0C4DH39 117 aa8.6□□□□□ -1.03
NUP188-211ENST00000550219 PANO1I0J062 215 aa8.6□□□□□ -1.03
NUP188-211ENST00000550219 IGKCP01834 107 aa8.6□□□□□ -1.03
NUP188-211ENST00000550219 CFAP161Q6P656 301 aa8.6□□□□□ -1.03
NUP188-211ENST00000550219 C20orf202A1L168 122 aa8.59□□□□□ -1.03
NUP188-211ENST00000550219 SMIM1B2RUZ4 78 aa8.59□□□□□ -1.03
NUP188-211ENST00000550219 H3BRM9 83 aa8.59□□□□□ -1.03
NUP188-211ENST00000550219 OXTP01178 125 aa8.59□□□□□ -1.03
NUP188-211ENST00000550219 MALP21145 153 aa8.59□□□□□ -1.03
NUP188-211ENST00000550219 AKR1D1P51857 326 aa8.59□□□□□ -1.03
NUP188-211ENST00000550219 HNRNPA3P51991 378 aaKnown RBP8.59□□□□□ -1.03
NUP188-211ENST00000550219 TMEM170BQ5T4T1 132 aa8.59□□□□□ -1.03
NUP188-211ENST00000550219 GVQW2A0A096LPI5 108 aaPredicted RBP8.58□□□□□ -1.04
NUP188-211ENST00000550219 IGLV5-39A0A0G2JS06 123 aa8.58□□□□□ -1.04
NUP188-211ENST00000550219 TMEM223A0PJW6 202 aa8.58□□□□□ -1.04
NUP188-211ENST00000550219 APOMO95445 188 aa8.58□□□□□ -1.04
NUP188-211ENST00000550219 SPINK8P0C7L1 97 aa8.56□□□□□ -1.04
NUP188-211ENST00000550219 CHTF8P0CG12 524 aa8.56□□□□□ -1.04
NUP188-211ENST00000550219 KIAA0087Q14695 138 aa8.56□□□□□ -1.04
NUP188-211ENST00000550219 SERTAD4-AS1Q5TG53 156 aa8.56□□□□□ -1.04
NUP188-211ENST00000550219 SDIM1Q6ZPB5 146 aa8.56□□□□□ -1.04
NUP188-211ENST00000550219 ORAOV1Q8WV07 137 aa8.56□□□□□ -1.04
NUP188-211ENST00000550219 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.55□□□□□ -1.04
NUP188-211ENST00000550219 CNBPP62633 177 aaKnown RBP8.55□□□□□ -1.04
NUP188-211ENST00000550219 JOSD1Q15040 202 aaPredicted RBP8.55□□□□□ -1.04
NUP188-211ENST00000550219 DPH3Q96FX2 82 aa8.55□□□□□ -1.04
NUP188-211ENST00000550219 LRP1Q07954 4544 aaKnown RBP8.55□□□□□ -1.04
NUP188-211ENST00000550219 SPAG11BQ08648 103 aa8.54□□□□□ -1.04
NUP188-211ENST00000550219 HIGD2BQ4VC39 106 aa8.54□□□□□ -1.04
NUP188-211ENST00000550219 Q8IZM0 81 aa8.54□□□□□ -1.04
NUP188-211ENST00000550219 F8WDY8 70 aa8.53□□□□□ -1.04
NUP188-211ENST00000550219 ZNF561-AS1K7EIQ3 104 aa8.53□□□□□ -1.04
NUP188-211ENST00000550219 SCGB1D1O95968 90 aa8.53□□□□□ -1.04
NUP188-211ENST00000550219 SLPIP03973 132 aa8.53□□□□□ -1.04
NUP188-211ENST00000550219 C2orf48Q96LS8 159 aa8.53□□□□□ -1.04
NUP188-211ENST00000550219 PLA2G2DQ9UNK4 145 aa8.53□□□□□ -1.04
NUP188-211ENST00000550219 E9PLD3 99 aa8.52□□□□□ -1.05
NUP188-211ENST00000550219 HERVK_113P61574 105 aa8.52□□□□□ -1.05
NUP188-211ENST00000550219 ATOH7Q8N100 152 aa8.52□□□□□ -1.05
NUP188-211ENST00000550219 STPG4Q8N801 248 aa8.52□□□□□ -1.05
NUP188-211ENST00000550219 COX7B2Q8TF08 81 aa8.52□□□□□ -1.05
NUP188-211ENST00000550219 FAT3Q8TDW7 4589 aa8.52□□□□□ -1.05
NUP188-211ENST00000550219 PKHD1L1Q86WI1 4243 aa8.52□□□□□ -1.05
NUP188-211ENST00000550219 A0A087WYN8 130 aa8.51□□□□□ -1.05
NUP188-211ENST00000550219 LOC105371267A0A1B0GV96 52 aa8.51□□□□□ -1.05
NUP188-211ENST00000550219 LEPROTO15243 131 aa8.51□□□□□ -1.05
NUP188-211ENST00000550219 CIRBPQ14011 172 aaKnown RBP8.51□□□□□ -1.05
NUP188-211ENST00000550219 PYY3Q5JQD4 70 aa8.51□□□□□ -1.05
NUP188-211ENST00000550219 SPACA4Q8TDM5 124 aa8.51□□□□□ -1.05
NUP188-211ENST00000550219 LINC00526Q96FQ7 95 aa8.51□□□□□ -1.05
NUP188-211ENST00000550219 PRSS2P07478 247 aa8.5□□□□□ -1.05
NUP188-211ENST00000550219 C6orf226Q5I0X4 101 aa8.5□□□□□ -1.05
NUP188-211ENST00000550219 PLEKHB2Q96CS7 222 aa8.5□□□□□ -1.05
NUP188-211ENST00000550219 TOMM7Q9P0U1 55 aa8.5□□□□□ -1.05
NUP188-211ENST00000550219 IGKV2-24A0A0C4DH68 120 aa8.49□□□□□ -1.05
NUP188-211ENST00000550219 CXCL5P42830 114 aa8.49□□□□□ -1.05
NUP188-211ENST00000550219 NDUFA1O15239 70 aa8.48□□□□□ -1.05
NUP188-211ENST00000550219 TSPEAR-AS2P59090 65 aa8.48□□□□□ -1.05
NUP188-211ENST00000550219 SYCNQ0VAF6 134 aa8.48□□□□□ -1.05
NUP188-211ENST00000550219 MAJINQ3KP22 176 aa8.48□□□□□ -1.05
NUP188-211ENST00000550219 ANKRD39Q53RE8 183 aa8.48□□□□□ -1.05
NUP188-211ENST00000550219 UNQ6190/PRO20217Q6UXQ8 127 aa8.48□□□□□ -1.05
NUP188-211ENST00000550219 Q6ZRU5 148 aa8.48□□□□□ -1.05
NUP188-211ENST00000550219 ZNF625Q96I27 306 aaPredicted RBP8.48□□□□□ -1.05
NUP188-211ENST00000550219 CAMK2N2Q96S95 79 aa8.48□□□□□ -1.05
NUP188-211ENST00000550219 IGKV2D-26A0A0A0MRZ7 120 aa8.47□□□□□ -1.05
NUP188-211ENST00000550219 J3QQQ9 107 aa8.47□□□□□ -1.05
NUP188-211ENST00000550219 CKS1BP61024 79 aa8.47□□□□□ -1.05
NUP188-211ENST00000550219 RNF151Q2KHN1 245 aa8.47□□□□□ -1.05
NUP188-211ENST00000550219 C10orf25Q5T742 122 aa8.47□□□□□ -1.05
NUP188-211ENST00000550219 C2orf82Q6UX34 121 aa8.47□□□□□ -1.05
NUP188-211ENST00000550219 C7orf33Q8WU49 177 aa8.47□□□□□ -1.05
NUP188-211ENST00000550219 CARD19Q96LW7 228 aa8.47□□□□□ -1.05
NUP188-211ENST00000550219 SFTA2Q6UW10 78 aa8.46□□□□□ -1.06
NUP188-211ENST00000550219 TRBV30A0A0K0K1B3 111 aa8.45□□□□□ -1.06
NUP188-211ENST00000550219 HSBP1L1C9JCN9 74 aa8.45□□□□□ -1.06
NUP188-211ENST00000550219 NMUP48645 174 aa8.45□□□□□ -1.06
NUP188-211ENST00000550219 PLAC8Q9NZF1 115 aa8.45□□□□□ -1.06
NUP188-211ENST00000550219 C6orf48Q9UBA6 75 aa8.45□□□□□ -1.06
NUP188-211ENST00000550219 NDUFA12Q9UI09 145 aa8.45□□□□□ -1.06
NUP188-211ENST00000550219 MT1HL1P0DM35 61 aa8.44□□□□□ -1.06
NUP188-211ENST00000550219 LGALS3P17931 250 aaKnown RBP8.44□□□□□ -1.06
NUP188-211ENST00000550219 HMCN2Q8NDA2 5059 aa8.44□□□□□ -1.06
NUP188-211ENST00000550219 A0A096LNI7 61 aa8.43□□□□□ -1.06
NUP188-211ENST00000550219 MYMXA0A1B0GTQ4 84 aa8.43□□□□□ -1.06
NUP188-211ENST00000550219 HERV-K104P63124 156 aa8.43□□□□□ -1.06
NUP188-211ENST00000550219 TLX1NBP0CAT3 122 aa8.42□□□□□ -1.06
NUP188-211ENST00000550219 VAMP8Q9BV40 100 aa8.42□□□□□ -1.06
NUP188-211ENST00000550219 SMIM6P0DI80 62 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms