RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 FAM229AH3BQW9 127 aa12.32□□□□□ -0.44
DDX54-207ENST00000550016 C6orf226Q5I0X4 101 aa12.32□□□□□ -0.44
DDX54-207ENST00000550016 LINC00474Q9P2X8 69 aa12.32□□□□□ -0.44
DDX54-207ENST00000550016 TRAV12-1A0A0B4J245 112 aa12.31□□□□□ -0.44
DDX54-207ENST00000550016 H3BRM9 83 aa12.31□□□□□ -0.44
DDX54-207ENST00000550016 MAJINQ3KP22 176 aa12.31□□□□□ -0.44
DDX54-207ENST00000550016 A0A087WYN8 130 aa12.3□□□□□ -0.44
DDX54-207ENST00000550016 LEPROTL1O95214 131 aa12.3□□□□□ -0.44
DDX54-207ENST00000550016 CKS1BP61024 79 aa12.3□□□□□ -0.44
DDX54-207ENST00000550016 Q5VSD8 79 aa12.3□□□□□ -0.44
DDX54-207ENST00000550016 C2orf82Q6UX34 121 aa12.3□□□□□ -0.44
DDX54-207ENST00000550016 C6orf48Q9UBA6 75 aa12.3□□□□□ -0.44
DDX54-207ENST00000550016 CHTOPQ9Y3Y2 248 aaKnown RBP12.3□□□□□ -0.44
DDX54-207ENST00000550016 DNAH8Q96JB1 4490 aa12.3□□□□□ -0.44
DDX54-207ENST00000550016 TRBV30A0A0K0K1B3 111 aa12.29□□□□□ -0.44
DDX54-207ENST00000550016 SPINK8P0C7L1 97 aa12.29□□□□□ -0.44
DDX54-207ENST00000550016 ZNF22P17026 224 aaPredicted RBP12.29□□□□□ -0.44
DDX54-207ENST00000550016 PTTG1IPP53801 180 aa12.28□□□□□ -0.44
DDX54-207ENST00000550016 GAGE2BQ13066 116 aa12.28□□□□□ -0.44
DDX54-207ENST00000550016 LINC00528Q8N1L1 170 aa12.28□□□□□ -0.44
DDX54-207ENST00000550016 PLAC8Q9NZF1 115 aa12.28□□□□□ -0.44
DDX54-207ENST00000550016 HSPB8Q9UJY1 196 aa12.28□□□□□ -0.44
DDX54-207ENST00000550016 C11orf86A6NJI1 115 aa12.27□□□□□ -0.45
DDX54-207ENST00000550016 COX7B2Q8TF08 81 aa12.27□□□□□ -0.45
DDX54-207ENST00000550016 TLX1NBP0CAT3 122 aa12.26□□□□□ -0.45
DDX54-207ENST00000550016 FABP4P15090 132 aa12.26□□□□□ -0.45
DDX54-207ENST00000550016 RPL18AQ02543 176 aaKnown RBP12.26□□□□□ -0.45
DDX54-207ENST00000550016 STPG4Q8N801 248 aa12.26□□□□□ -0.45
DDX54-207ENST00000550016 F8VRH5 84 aa12.25□□□□□ -0.45
DDX54-207ENST00000550016 CXCL5P42830 114 aa12.25□□□□□ -0.45
DDX54-207ENST00000550016 TMEM170BQ5T4T1 132 aa12.25□□□□□ -0.45
DDX54-207ENST00000550016 IGLV5-39A0A0G2JS06 123 aa12.23□□□□□ -0.45
DDX54-207ENST00000550016 H0Y8G0 127 aa12.23□□□□□ -0.45
DDX54-207ENST00000550016 PLA2G1BP04054 148 aaKnown RBP12.23□□□□□ -0.45
DDX54-207ENST00000550016 ODF1Q14990 250 aa12.22□□□□□ -0.45
DDX54-207ENST00000550016 C9orf116Q5BN46 136 aaPredicted RBP12.22□□□□□ -0.45
DDX54-207ENST00000550016 Q6ZRP5 223 aa12.22□□□□□ -0.45
DDX54-207ENST00000550016 NDUFC2-KCTD14E9PQ53 114 aa12.2□□□□□ -0.46
DDX54-207ENST00000550016 COA6Q5JTJ3 125 aaKnown RBP12.2□□□□□ -0.46
DDX54-207ENST00000550016 SRRM2Q9UQ35 2752 aaKnown RBP12.19□□□□□ -0.46
DDX54-207ENST00000550016 GAGE2EQ4V326 116 aa12.19□□□□□ -0.46
DDX54-207ENST00000550016 MAP1LC3CQ9BXW4 147 aa12.19□□□□□ -0.46
DDX54-207ENST00000550016 GAGE2DQ9UEU5 116 aa12.19□□□□□ -0.46
DDX54-207ENST00000550016 A0A1W2PNN7 141 aa12.18□□□□□ -0.46
DDX54-207ENST00000550016 TMEM223A0PJW6 202 aa12.18□□□□□ -0.46
DDX54-207ENST00000550016 RPL37AP61513 92 aaKnown RBP12.16□□□□□ -0.46
DDX54-207ENST00000550016 C7orf33Q8WU49 177 aa12.16□□□□□ -0.46
DDX54-207ENST00000550016 VPS13BQ7Z7G8 4022 aa12.15□□□□□ -0.46
DDX54-207ENST00000550016 INAFM2P0DMQ5 153 aa12.15□□□□□ -0.46
DDX54-207ENST00000550016 PLNP26678 52 aa12.15□□□□□ -0.46
DDX54-207ENST00000550016 DPM2O94777 84 aa12.14□□□□□ -0.47
DDX54-207ENST00000550016 KRTAP10-4P60372 401 aaPredicted RBP12.14□□□□□ -0.47
DDX54-207ENST00000550016 SYS1-DBNDD2H3BUS1 97 aa12.12□□□□□ -0.47
DDX54-207ENST00000550016 C9orf129Q5T035 196 aaKnown RBP12.12□□□□□ -0.47
DDX54-207ENST00000550016 SFTA2Q6UW10 78 aa12.12□□□□□ -0.47
DDX54-207ENST00000550016 PMCHL2Q9BQD1 86 aa12.12□□□□□ -0.47
DDX54-207ENST00000550016 FAM168BA1KXE4 195 aa12.11□□□□□ -0.47
DDX54-207ENST00000550016 IGKCP01834 107 aa12.11□□□□□ -0.47
DDX54-207ENST00000550016 ZNF625Q96I27 306 aaPredicted RBP12.1□□□□□ -0.47
DDX54-207ENST00000550016 FAM19A5Q7Z5A7 132 aaPredicted RBP12.09□□□□□ -0.47
DDX54-207ENST00000550016 FAT1Q14517 4588 aa12.08□□□□□ -0.48
DDX54-207ENST00000550016 PET117Q6UWS5 81 aa12.08□□□□□ -0.48
DDX54-207ENST00000550016 XAGE1AQ9HD64 81 aa12.08□□□□□ -0.48
DDX54-207ENST00000550016 ERG28Q9UKR5 140 aa12.08□□□□□ -0.48
DDX54-207ENST00000550016 PFN2P35080 140 aa12.07□□□□□ -0.48
DDX54-207ENST00000550016 COX17Q14061 63 aa12.07□□□□□ -0.48
DDX54-207ENST00000550016 PHF5AQ7RTV0 110 aaKnown RBP12.07□□□□□ -0.48
DDX54-207ENST00000550016 LEPROTO15243 131 aa12.06□□□□□ -0.48
DDX54-207ENST00000550016 C3orf79P0CE67 100 aa12.06□□□□□ -0.48
DDX54-207ENST00000550016 HERVK_113P61574 105 aa12.06□□□□□ -0.48
DDX54-207ENST00000550016 LINC01545Q5VT33 79 aa12.06□□□□□ -0.48
DDX54-207ENST00000550016 KRTAP7-1Q8IUC3 87 aa12.06□□□□□ -0.48
DDX54-207ENST00000550016 PLEKHB2Q96CS7 222 aa12.05□□□□□ -0.48
DDX54-207ENST00000550016 FLG2Q5D862 2391 aaPredicted RBP12.05□□□□□ -0.48
DDX54-207ENST00000550016 KRTDAPP60985 99 aa12.04□□□□□ -0.48
DDX54-207ENST00000550016 M0QXV9 152 aa12.03□□□□□ -0.48
DDX54-207ENST00000550016 PRR3P79522 188 aaKnown RBP12.03□□□□□ -0.48
DDX54-207ENST00000550016 NDUFA12Q9UI09 145 aa12.03□□□□□ -0.48
DDX54-207ENST00000550016 HERV-K104P63124 156 aa12.02□□□□□ -0.49
DDX54-207ENST00000550016 SERTAD4-AS1Q5TG53 156 aa12.02□□□□□ -0.49
DDX54-207ENST00000550016 ABCA13Q86UQ4 5058 aa12.02□□□□□ -0.49
DDX54-207ENST00000550016 PCLOQ9Y6V0 5065 aa12.02□□□□□ -0.49
DDX54-207ENST00000550016 MYMXA0A1B0GTQ4 84 aa12.01□□□□□ -0.49
DDX54-207ENST00000550016 J3QQQ9 107 aa12.01□□□□□ -0.49
DDX54-207ENST00000550016 S100A6P06703 90 aa12.01□□□□□ -0.49
DDX54-207ENST00000550016 TSPEAR-AS2P59090 65 aa12.01□□□□□ -0.49
DDX54-207ENST00000550016 PLA2G2DQ9UNK4 145 aa12.01□□□□□ -0.49
DDX54-207ENST00000550016 HNRNPA3P51991 378 aaKnown RBP12□□□□□ -0.49
DDX54-207ENST00000550016 LINC00158P58513 81 aa12□□□□□ -0.49
DDX54-207ENST00000550016 HIST3H2BBQ8N257 126 aa12□□□□□ -0.49
DDX54-207ENST00000550016 SND1-IT1Q9HBX3 110 aa12□□□□□ -0.49
DDX54-207ENST00000550016 C22orf24Q9Y442 160 aa12□□□□□ -0.49
DDX54-207ENST00000550016 PSORS1C2Q9UIG4 136 aa11.99□□□□□ -0.49
DDX54-207ENST00000550016 LINC00587B1AMM8 73 aa11.98□□□□□ -0.49
DDX54-207ENST00000550016 E9PLD3 99 aa11.98□□□□□ -0.49
DDX54-207ENST00000550016 LGALS3P17931 250 aaKnown RBP11.98□□□□□ -0.49
DDX54-207ENST00000550016 S100A2P29034 98 aa11.98□□□□□ -0.49
DDX54-207ENST00000550016 LBHQ53QV2 105 aaPredicted RBP11.98□□□□□ -0.49
DDX54-207ENST00000550016 TP73-AS1Q9UF72 201 aa11.98□□□□□ -0.49
DDX54-207ENST00000550016 C20orf202A1L168 122 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms