RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 CKS1BP61024 79 aa6.44□□□□□ -1.38
SMARCD1-206ENST00000549274 C6orf226Q5I0X4 101 aa6.44□□□□□ -1.38
SMARCD1-206ENST00000549274 C15orf56Q8N910 161 aa6.44□□□□□ -1.38
SMARCD1-206ENST00000549274 IGLV5-39A0A0G2JS06 123 aa6.43□□□□□ -1.38
SMARCD1-206ENST00000549274 TMEM223A0PJW6 202 aa6.43□□□□□ -1.38
SMARCD1-206ENST00000549274 LINC00587B1AMM8 73 aa6.43□□□□□ -1.38
SMARCD1-206ENST00000549274 NDUFA1O15239 70 aa6.43□□□□□ -1.38
SMARCD1-206ENST00000549274 PTTG1IPP53801 180 aa6.43□□□□□ -1.38
SMARCD1-206ENST00000549274 CNBPP62633 177 aaKnown RBP6.43□□□□□ -1.38
SMARCD1-206ENST00000549274 MAPKAPK5-AS1Q8N8E1 139 aa6.43□□□□□ -1.38
SMARCD1-206ENST00000549274 COX7B2Q8TF08 81 aa6.43□□□□□ -1.38
SMARCD1-206ENST00000549274 FAM30AQ9NZY2 134 aa6.43□□□□□ -1.38
SMARCD1-206ENST00000549274 LECT2O14960 151 aa6.42□□□□□ -1.38
SMARCD1-206ENST00000549274 SPINK8P0C7L1 97 aa6.42□□□□□ -1.38
SMARCD1-206ENST00000549274 NMUP48645 174 aa6.42□□□□□ -1.38
SMARCD1-206ENST00000549274 RNF151Q2KHN1 245 aa6.42□□□□□ -1.38
SMARCD1-206ENST00000549274 CARD19Q96LW7 228 aa6.42□□□□□ -1.38
SMARCD1-206ENST00000549274 CAMK2N2Q96S95 79 aa6.42□□□□□ -1.38
SMARCD1-206ENST00000549274 TOMM7Q9P0U1 55 aa6.42□□□□□ -1.38
SMARCD1-206ENST00000549274 TRBV30A0A0K0K1B3 111 aa6.41□□□□□ -1.38
SMARCD1-206ENST00000549274 E9PLD3 99 aa6.41□□□□□ -1.38
SMARCD1-206ENST00000549274 LEPROTO15243 131 aa6.41□□□□□ -1.38
SMARCD1-206ENST00000549274 GCSHP23434 173 aa6.41□□□□□ -1.38
SMARCD1-206ENST00000549274 HERV-K104P63124 156 aa6.41□□□□□ -1.38
SMARCD1-206ENST00000549274 SYCNQ0VAF6 134 aa6.41□□□□□ -1.38
SMARCD1-206ENST00000549274 JOSD1Q15040 202 aaPredicted RBP6.41□□□□□ -1.38
SMARCD1-206ENST00000549274 HIGD2BQ4VC39 106 aa6.41□□□□□ -1.38
SMARCD1-206ENST00000549274 PMCHL2Q9BQD1 86 aa6.41□□□□□ -1.38
SMARCD1-206ENST00000549274 IGLV5-52A0A0A0MRZ9 124 aa6.4□□□□□ -1.38
SMARCD1-206ENST00000549274 MYMXA0A1B0GTQ4 84 aa6.4□□□□□ -1.38
SMARCD1-206ENST00000549274 LGALS3P17931 250 aaKnown RBP6.4□□□□□ -1.38
SMARCD1-206ENST00000549274 KIAA0087Q14695 138 aa6.39□□□□□ -1.39
SMARCD1-206ENST00000549274 FAT2Q9NYQ8 4349 aa6.39□□□□□ -1.39
SMARCD1-206ENST00000549274 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.38□□□□□ -1.39
SMARCD1-206ENST00000549274 J3QQQ9 107 aa6.38□□□□□ -1.39
SMARCD1-206ENST00000549274 COX17Q14061 63 aa6.38□□□□□ -1.39
SMARCD1-206ENST00000549274 WFDC2Q14508 124 aa6.38□□□□□ -1.39
SMARCD1-206ENST00000549274 C9orf163Q8N9P6 203 aa6.38□□□□□ -1.39
SMARCD1-206ENST00000549274 LINC00474Q9P2X8 69 aa6.38□□□□□ -1.39
SMARCD1-206ENST00000549274 HECTD4Q9Y4D8 3996 aa6.37□□□□□ -1.39
SMARCD1-206ENST00000549274 A4D1N5 150 aa6.37□□□□□ -1.39
SMARCD1-206ENST00000549274 S100A12P80511 92 aa6.37□□□□□ -1.39
SMARCD1-206ENST00000549274 CIRBPQ14011 172 aaKnown RBP6.37□□□□□ -1.39
SMARCD1-206ENST00000549274 VAMP8Q9BV40 100 aa6.37□□□□□ -1.39
SMARCD1-206ENST00000549274 NDUFA12Q9UI09 145 aa6.37□□□□□ -1.39
SMARCD1-206ENST00000549274 LOC107984640A0A0U1RRK4 108 aa6.36□□□□□ -1.39
SMARCD1-206ENST00000549274 TLX1NBP0CAT3 122 aa6.36□□□□□ -1.39
SMARCD1-206ENST00000549274 Q6ZRU5 148 aa6.36□□□□□ -1.39
SMARCD1-206ENST00000549274 ATOH7Q8N100 152 aa6.36□□□□□ -1.39
SMARCD1-206ENST00000549274 SMIM6P0DI80 62 aa6.35□□□□□ -1.39
SMARCD1-206ENST00000549274 STPG4Q8N801 248 aa6.35□□□□□ -1.39
SMARCD1-206ENST00000549274 ZNF625Q96I27 306 aaPredicted RBP6.35□□□□□ -1.39
SMARCD1-206ENST00000549274 RYR3Q15413 4870 aa6.34□□□□□ -1.39
SMARCD1-206ENST00000549274 A0A1B0GVY2 172 aa6.34□□□□□ -1.39
SMARCD1-206ENST00000549274 ZNF815PA8K554 130 aa6.34□□□□□ -1.39
SMARCD1-206ENST00000549274 NDUFC2-KCTD14E9PQ53 114 aa6.34□□□□□ -1.39
SMARCD1-206ENST00000549274 MEIG1Q5JSS6 88 aa6.34□□□□□ -1.39
SMARCD1-206ENST00000549274 UNQ6190/PRO20217Q6UXQ8 127 aa6.34□□□□□ -1.39
SMARCD1-206ENST00000549274 COPS9Q8WXC6 57 aa6.34□□□□□ -1.39
SMARCD1-206ENST00000549274 C16orf90A8MZG2 172 aa6.33□□□□□ -1.4
SMARCD1-206ENST00000549274 PYY3Q5JQD4 70 aa6.33□□□□□ -1.4
SMARCD1-206ENST00000549274 C2orf82Q6UX34 121 aa6.33□□□□□ -1.4
SMARCD1-206ENST00000549274 LINC00526Q96FQ7 95 aa6.33□□□□□ -1.4
SMARCD1-206ENST00000549274 C6orf48Q9UBA6 75 aa6.33□□□□□ -1.4
SMARCD1-206ENST00000549274 ERG28Q9UKR5 140 aa6.33□□□□□ -1.4
SMARCD1-206ENST00000549274 DNAH11Q96DT5 4516 aa6.33□□□□□ -1.4
SMARCD1-206ENST00000549274 TIMM17BO60830 172 aa6.32□□□□□ -1.4
SMARCD1-206ENST00000549274 PCP4P48539 62 aa6.32□□□□□ -1.4
SMARCD1-206ENST00000549274 SPATA45Q537H7 98 aa6.32□□□□□ -1.4
SMARCD1-206ENST00000549274 SCGB1D4Q6XE38 83 aa6.32□□□□□ -1.4
SMARCD1-206ENST00000549274 PKD1P98161 4303 aa6.31□□□□□ -1.4
SMARCD1-206ENST00000549274 TMEM238C9JI98 176 aa6.31□□□□□ -1.4
SMARCD1-206ENST00000549274 DLEU1O43261 78 aa6.31□□□□□ -1.4
SMARCD1-206ENST00000549274 SLPIP03973 132 aa6.31□□□□□ -1.4
SMARCD1-206ENST00000549274 KRTAP10-2P60368 255 aa6.31□□□□□ -1.4
SMARCD1-206ENST00000549274 RPL18AQ02543 176 aaKnown RBP6.31□□□□□ -1.4
SMARCD1-206ENST00000549274 C10orf25Q5T742 122 aa6.31□□□□□ -1.4
SMARCD1-206ENST00000549274 LCE3BQ5TA77 95 aa6.31□□□□□ -1.4
SMARCD1-206ENST00000549274 Q6ZVH6 145 aa6.31□□□□□ -1.4
SMARCD1-206ENST00000549274 PAM16Q9Y3D7 125 aa6.31□□□□□ -1.4
SMARCD1-206ENST00000549274 COX8AP10176 69 aa6.3□□□□□ -1.4
SMARCD1-206ENST00000549274 LINC00158P58513 81 aa6.3□□□□□ -1.4
SMARCD1-206ENST00000549274 TSPEAR-AS2P59090 65 aa6.3□□□□□ -1.4
SMARCD1-206ENST00000549274 SDIM1Q6ZPB5 146 aa6.3□□□□□ -1.4
SMARCD1-206ENST00000549274 MIEN1Q9BRT3 115 aa6.3□□□□□ -1.4
SMARCD1-206ENST00000549274 PKHD1P08F94 4074 aa6.3□□□□□ -1.4
SMARCD1-206ENST00000549274 IGKV2D-26A0A0A0MRZ7 120 aa6.29□□□□□ -1.4
SMARCD1-206ENST00000549274 A0A0J9YXY3 114 aa6.29□□□□□ -1.4
SMARCD1-206ENST00000549274 LOC105371267A0A1B0GV96 52 aa6.29□□□□□ -1.4
SMARCD1-206ENST00000549274 PFN2P35080 140 aa6.29□□□□□ -1.4
SMARCD1-206ENST00000549274 SLC25A34Q6PIV7 304 aa6.29□□□□□ -1.4
SMARCD1-206ENST00000549274 BOD1L2Q8IYS8 172 aa6.29□□□□□ -1.4
SMARCD1-206ENST00000549274 DNAH5Q8TE73 4624 aa6.28□□□□□ -1.4
SMARCD1-206ENST00000549274 RPL24P83731 157 aaKnown RBP6.28□□□□□ -1.4
SMARCD1-206ENST00000549274 GAGE2BQ13066 116 aa6.28□□□□□ -1.4
SMARCD1-206ENST00000549274 MAJINQ3KP22 176 aa6.28□□□□□ -1.4
SMARCD1-206ENST00000549274 PPDPFQ9H3Y8 114 aa6.28□□□□□ -1.4
SMARCD1-206ENST00000549274 B5MCH6 92 aa6.27□□□□□ -1.41
SMARCD1-206ENST00000549274 SMIM13P0DJ93 91 aa6.27□□□□□ -1.41
SMARCD1-206ENST00000549274 IFITM1P13164 125 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms