RNA–Protein interactions for RNA: ENST00000548961.5

RACGAP1-216, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 3 BASIC

Gene RACGAP1, Length 387 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-216ENST00000548961 CAMK2N2Q96S95 79 aa4.38□□□□□ -1.71
RACGAP1-216ENST00000548961 KRTAP9-3Q9BYQ3 159 aa4.38□□□□□ -1.71
RACGAP1-216ENST00000548961 HSPB8Q9UJY1 196 aa4.38□□□□□ -1.71
RACGAP1-216ENST00000548961 CHTOPQ9Y3Y2 248 aaKnown RBP4.38□□□□□ -1.71
RACGAP1-216ENST00000548961 ABCA13Q86UQ4 5058 aa4.38□□□□□ -1.71
RACGAP1-216ENST00000548961 C11orf86A6NJI1 115 aa4.37□□□□□ -1.71
RACGAP1-216ENST00000548961 SPINK8P0C7L1 97 aa4.37□□□□□ -1.71
RACGAP1-216ENST00000548961 CNBPP62633 177 aaKnown RBP4.37□□□□□ -1.71
RACGAP1-216ENST00000548961 C6orf226Q5I0X4 101 aa4.37□□□□□ -1.71
RACGAP1-216ENST00000548961 TMEM170BQ5T4T1 132 aa4.37□□□□□ -1.71
RACGAP1-216ENST00000548961 UNQ6190/PRO20217Q6UXQ8 127 aa4.37□□□□□ -1.71
RACGAP1-216ENST00000548961 Q6ZRU5 148 aa4.37□□□□□ -1.71
RACGAP1-216ENST00000548961 OR10D4PQ8NGN7 298 aa4.37□□□□□ -1.71
RACGAP1-216ENST00000548961 CARD19Q96LW7 228 aa4.37□□□□□ -1.71
RACGAP1-216ENST00000548961 CHAC1Q9BUX1 264 aa4.37□□□□□ -1.71
RACGAP1-216ENST00000548961 FAM30AQ9NZY2 134 aa4.37□□□□□ -1.71
RACGAP1-216ENST00000548961 TRAV12-1A0A0B4J245 112 aa4.36□□□□□ -1.71
RACGAP1-216ENST00000548961 H3BRM9 83 aa4.36□□□□□ -1.71
RACGAP1-216ENST00000548961 IGLC3P0DOY3 106 aa4.36□□□□□ -1.71
RACGAP1-216ENST00000548961 ZNF22P17026 224 aaPredicted RBP4.36□□□□□ -1.71
RACGAP1-216ENST00000548961 CKS1BP61024 79 aa4.36□□□□□ -1.71
RACGAP1-216ENST00000548961 C10orf25Q5T742 122 aa4.36□□□□□ -1.71
RACGAP1-216ENST00000548961 C2orf82Q6UX34 121 aa4.36□□□□□ -1.71
RACGAP1-216ENST00000548961 SDIM1Q6ZPB5 146 aa4.36□□□□□ -1.71
RACGAP1-216ENST00000548961 LINC01561Q8N1V8 128 aa4.36□□□□□ -1.71
RACGAP1-216ENST00000548961 C2orf48Q96LS8 159 aa4.36□□□□□ -1.71
RACGAP1-216ENST00000548961 PMCHL2Q9BQD1 86 aa4.36□□□□□ -1.71
RACGAP1-216ENST00000548961 MAP1LC3CQ9BXW4 147 aa4.36□□□□□ -1.71
RACGAP1-216ENST00000548961 MRPL35Q9NZE8 188 aaKnown RBP4.36□□□□□ -1.71
RACGAP1-216ENST00000548961 IGKV2-24A0A0C4DH68 120 aa4.35□□□□□ -1.71
RACGAP1-216ENST00000548961 SMIM1B2RUZ4 78 aa4.35□□□□□ -1.71
RACGAP1-216ENST00000548961 NDUFA1O15239 70 aa4.35□□□□□ -1.71
RACGAP1-216ENST00000548961 S100A6P06703 90 aa4.35□□□□□ -1.71
RACGAP1-216ENST00000548961 CHTF8P0CG12 524 aa4.35□□□□□ -1.71
RACGAP1-216ENST00000548961 XGP55808 180 aa4.35□□□□□ -1.71
RACGAP1-216ENST00000548961 KIAA0087Q14695 138 aa4.35□□□□□ -1.71
RACGAP1-216ENST00000548961 COX7B2Q8TF08 81 aa4.35□□□□□ -1.71
RACGAP1-216ENST00000548961 IGLV5-45A0A087WSX0 123 aa4.34□□□□□ -1.71
RACGAP1-216ENST00000548961 F8VRH5 84 aa4.34□□□□□ -1.71
RACGAP1-216ENST00000548961 F8WDY8 70 aa4.34□□□□□ -1.71
RACGAP1-216ENST00000548961 PANO1I0J062 215 aa4.34□□□□□ -1.71
RACGAP1-216ENST00000548961 CDK2AP2O75956 126 aa4.34□□□□□ -1.71
RACGAP1-216ENST00000548961 KRTDAPP60985 99 aa4.34□□□□□ -1.71
RACGAP1-216ENST00000548961 GAGE2BQ13066 116 aa4.34□□□□□ -1.71
RACGAP1-216ENST00000548961 ODF1Q14990 250 aa4.34□□□□□ -1.71
RACGAP1-216ENST00000548961 MAJINQ3KP22 176 aa4.34□□□□□ -1.71
RACGAP1-216ENST00000548961 COA6Q5JTJ3 125 aaKnown RBP4.34□□□□□ -1.71
RACGAP1-216ENST00000548961 A0A096LNI7 61 aa4.33□□□□□ -1.72
RACGAP1-216ENST00000548961 LOC107984640A0A0U1RRK4 108 aa4.33□□□□□ -1.72
RACGAP1-216ENST00000548961 SYS1-DBNDD2H3BUS1 97 aa4.33□□□□□ -1.72
RACGAP1-216ENST00000548961 DPM2O94777 84 aa4.33□□□□□ -1.72
RACGAP1-216ENST00000548961 SMR3BP02814 79 aaPredicted RBP4.33□□□□□ -1.72
RACGAP1-216ENST00000548961 PLNP26678 52 aa4.33□□□□□ -1.72
RACGAP1-216ENST00000548961 S100A2P29034 98 aa4.33□□□□□ -1.72
RACGAP1-216ENST00000548961 RPL18AQ02543 176 aaKnown RBP4.33□□□□□ -1.72
RACGAP1-216ENST00000548961 C9orf116Q5BN46 136 aaPredicted RBP4.33□□□□□ -1.72
RACGAP1-216ENST00000548961 Q8IZM0 81 aa4.33□□□□□ -1.72
RACGAP1-216ENST00000548961 C6orf48Q9UBA6 75 aa4.33□□□□□ -1.72
RACGAP1-216ENST00000548961 TMEM223A0PJW6 202 aa4.32□□□□□ -1.72
RACGAP1-216ENST00000548961 IGKCP01834 107 aa4.32□□□□□ -1.72
RACGAP1-216ENST00000548961 C3orf79P0CE67 100 aa4.32□□□□□ -1.72
RACGAP1-216ENST00000548961 SNRPEP62304 92 aaKnown RBP4.32□□□□□ -1.72
RACGAP1-216ENST00000548961 RNF151Q2KHN1 245 aa4.32□□□□□ -1.72
RACGAP1-216ENST00000548961 GAGE2EQ4V326 116 aa4.32□□□□□ -1.72
RACGAP1-216ENST00000548961 KRTAP5-3Q6L8H2 238 aa4.32□□□□□ -1.72
RACGAP1-216ENST00000548961 Q6ZSA8 131 aa4.32□□□□□ -1.72
RACGAP1-216ENST00000548961 SCXQ7RTU7 201 aa4.32□□□□□ -1.72
RACGAP1-216ENST00000548961 HIST3H2BBQ8N257 126 aa4.32□□□□□ -1.72
RACGAP1-216ENST00000548961 CIRBP-AS1Q8TBR5 109 aa4.32□□□□□ -1.72
RACGAP1-216ENST00000548961 GAGE2DQ9UEU5 116 aa4.32□□□□□ -1.72
RACGAP1-216ENST00000548961 DNAH5Q8TE73 4624 aa4.31□□□□□ -1.72
RACGAP1-216ENST00000548961 IGLV5-39A0A0G2JS06 123 aa4.31□□□□□ -1.72
RACGAP1-216ENST00000548961 TRBV30A0A0K0K1B3 111 aa4.31□□□□□ -1.72
RACGAP1-216ENST00000548961 PTTG1IPP53801 180 aa4.31□□□□□ -1.72
RACGAP1-216ENST00000548961 PET117Q6UWS5 81 aa4.31□□□□□ -1.72
RACGAP1-216ENST00000548961 SPACA4Q8TDM5 124 aa4.31□□□□□ -1.72
RACGAP1-216ENST00000548961 ZNF625Q96I27 306 aaPredicted RBP4.31□□□□□ -1.72
RACGAP1-216ENST00000548961 PKIGQ9Y2B9 76 aa4.31□□□□□ -1.72
RACGAP1-216ENST00000548961 A0A087WYN8 130 aa4.3□□□□□ -1.72
RACGAP1-216ENST00000548961 PFN2P35080 140 aa4.3□□□□□ -1.72
RACGAP1-216ENST00000548961 CXCL5P42830 114 aa4.3□□□□□ -1.72
RACGAP1-216ENST00000548961 HERVK_113P61574 105 aa4.3□□□□□ -1.72
RACGAP1-216ENST00000548961 LINC01545Q5VT33 79 aa4.3□□□□□ -1.72
RACGAP1-216ENST00000548961 Q6ZRP5 223 aa4.3□□□□□ -1.72
RACGAP1-216ENST00000548961 STPG4Q8N801 248 aa4.3□□□□□ -1.72
RACGAP1-216ENST00000548961 HIST1H2BLQ99880 126 aa4.3□□□□□ -1.72
RACGAP1-216ENST00000548961 LINC00474Q9P2X8 69 aa4.3□□□□□ -1.72
RACGAP1-216ENST00000548961 C20orf202A1L168 122 aa4.29□□□□□ -1.72
RACGAP1-216ENST00000548961 NDUFC2-KCTD14E9PQ53 114 aa4.29□□□□□ -1.72
RACGAP1-216ENST00000548961 LEPROTO15243 131 aa4.29□□□□□ -1.72
RACGAP1-216ENST00000548961 ATOH7Q8N100 152 aa4.29□□□□□ -1.72
RACGAP1-216ENST00000548961 TMA7Q9Y2S6 64 aaKnown RBP4.29□□□□□ -1.72
RACGAP1-216ENST00000548961 LRP1BQ9NZR2 4599 aa4.29□□□□□ -1.72
RACGAP1-216ENST00000548961 HERC1Q15751 4861 aa4.28□□□□□ -1.72
RACGAP1-216ENST00000548961 HSPG2P98160 4391 aa4.28□□□□□ -1.72
RACGAP1-216ENST00000548961 A0A0U1RRA0 63 aa4.28□□□□□ -1.72
RACGAP1-216ENST00000548961 A0A1W2PNN7 141 aa4.28□□□□□ -1.72
RACGAP1-216ENST00000548961 FAM168BA1KXE4 195 aa4.28□□□□□ -1.72
RACGAP1-216ENST00000548961 C5orf52A6NGY3 159 aa4.28□□□□□ -1.72
RACGAP1-216ENST00000548961 TLX1NBP0CAT3 122 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms