RNA–Protein interactions for RNA: ENST00000546918.1

TUBA1A-203, Transcript of tubulin alpha 1a, humanhuman

TSL 3 BASIC

Gene TUBA1A, Length 984 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-203ENST00000546918 J3QQQ9 107 aa11.28□□□□□ -0.6
TUBA1A-203ENST00000546918 KRTAP10-2P60368 255 aa11.28□□□□□ -0.6
TUBA1A-203ENST00000546918 MAJINQ3KP22 176 aa11.28□□□□□ -0.6
TUBA1A-203ENST00000546918 ANKRD39Q53RE8 183 aa11.28□□□□□ -0.6
TUBA1A-203ENST00000546918 Q6ZRU5 148 aa11.28□□□□□ -0.6
TUBA1A-203ENST00000546918 IGLV5-52A0A0A0MRZ9 124 aa11.27□□□□□ -0.61
TUBA1A-203ENST00000546918 LGALS3P17931 250 aaKnown RBP11.27□□□□□ -0.61
TUBA1A-203ENST00000546918 C10orf25Q5T742 122 aa11.27□□□□□ -0.61
TUBA1A-203ENST00000546918 CDPF1Q6NVV7 123 aa11.27□□□□□ -0.61
TUBA1A-203ENST00000546918 SFTA2Q6UW10 78 aa11.27□□□□□ -0.61
TUBA1A-203ENST00000546918 UNQ6190/PRO20217Q6UXQ8 127 aa11.27□□□□□ -0.61
TUBA1A-203ENST00000546918 IGKV2D-26A0A0A0MRZ7 120 aa11.26□□□□□ -0.61
TUBA1A-203ENST00000546918 TRBV30A0A0K0K1B3 111 aa11.25□□□□□ -0.61
TUBA1A-203ENST00000546918 FUSP35637 526 aaKnown RBP eCLIP11.25□□□□□ -0.61
TUBA1A-203ENST00000546918 ZNF625Q96I27 306 aaPredicted RBP11.25□□□□□ -0.61
TUBA1A-203ENST00000546918 PGPEP1Q9NXJ5 209 aa11.25□□□□□ -0.61
TUBA1A-203ENST00000546918 C6orf48Q9UBA6 75 aa11.25□□□□□ -0.61
TUBA1A-203ENST00000546918 NDUFA12Q9UI09 145 aa11.25□□□□□ -0.61
TUBA1A-203ENST00000546918 NMUP48645 174 aa11.24□□□□□ -0.61
TUBA1A-203ENST00000546918 RNF151Q2KHN1 245 aa11.24□□□□□ -0.61
TUBA1A-203ENST00000546918 VAMP8Q9BV40 100 aa11.24□□□□□ -0.61
TUBA1A-203ENST00000546918 C9orf163Q8N9P6 203 aa11.23□□□□□ -0.61
TUBA1A-203ENST00000546918 MYMXA0A1B0GTQ4 84 aa11.22□□□□□ -0.61
TUBA1A-203ENST00000546918 PKD1P98161 4303 aa11.21□□□□□ -0.61
TUBA1A-203ENST00000546918 HERV-K104P63124 156 aa11.21□□□□□ -0.61
TUBA1A-203ENST00000546918 PAM16Q9Y3D7 125 aa11.21□□□□□ -0.61
TUBA1A-203ENST00000546918 DNAH11Q96DT5 4516 aa11.21□□□□□ -0.62
TUBA1A-203ENST00000546918 SMIM6P0DI80 62 aa11.2□□□□□ -0.62
TUBA1A-203ENST00000546918 LINC01620Q4KN68 170 aa11.2□□□□□ -0.62
TUBA1A-203ENST00000546918 SPATA45Q537H7 98 aa11.2□□□□□ -0.62
TUBA1A-203ENST00000546918 C9orf116Q5BN46 136 aaPredicted RBP11.2□□□□□ -0.62
TUBA1A-203ENST00000546918 TTTY13Q9BZ97 58 aa11.2□□□□□ -0.62
TUBA1A-203ENST00000546918 ZNF815PA8K554 130 aa11.19□□□□□ -0.62
TUBA1A-203ENST00000546918 PKIGQ9Y2B9 76 aa11.19□□□□□ -0.62
TUBA1A-203ENST00000546918 PCP2Q8IVA1 136 aa11.18□□□□□ -0.62
TUBA1A-203ENST00000546918 ERG28Q9UKR5 140 aa11.18□□□□□ -0.62
TUBA1A-203ENST00000546918 LOC107984640A0A0U1RRK4 108 aa11.17□□□□□ -0.62
TUBA1A-203ENST00000546918 TLX1NBP0CAT3 122 aa11.17□□□□□ -0.62
TUBA1A-203ENST00000546918 GCSHP23434 173 aa11.17□□□□□ -0.62
TUBA1A-203ENST00000546918 HECTD4Q9Y4D8 3996 aa11.17□□□□□ -0.62
TUBA1A-203ENST00000546918 RPL18AQ02543 176 aaKnown RBP11.16□□□□□ -0.62
TUBA1A-203ENST00000546918 MEIG1Q5JSS6 88 aa11.16□□□□□ -0.62
TUBA1A-203ENST00000546918 A0A0J9YXY3 114 aa11.15□□□□□ -0.62
TUBA1A-203ENST00000546918 C16orf90A8MZG2 172 aa11.15□□□□□ -0.62
TUBA1A-203ENST00000546918 NDUFC2-KCTD14E9PQ53 114 aa11.15□□□□□ -0.62
TUBA1A-203ENST00000546918 S100A12P80511 92 aa11.15□□□□□ -0.62
TUBA1A-203ENST00000546918 SDIM1Q6ZPB5 146 aa11.15□□□□□ -0.62
TUBA1A-203ENST00000546918 PFN2P35080 140 aa11.14□□□□□ -0.63
TUBA1A-203ENST00000546918 COX17Q14061 63 aa11.14□□□□□ -0.63
TUBA1A-203ENST00000546918 LINC00587B1AMM8 73 aa11.13□□□□□ -0.63
TUBA1A-203ENST00000546918 SMIM13P0DJ93 91 aa11.13□□□□□ -0.63
TUBA1A-203ENST00000546918 COX8AP10176 69 aa11.13□□□□□ -0.63
TUBA1A-203ENST00000546918 KRTAP10-1P60331 282 aa11.13□□□□□ -0.63
TUBA1A-203ENST00000546918 Q6ZRP5 223 aa11.13□□□□□ -0.63
TUBA1A-203ENST00000546918 A0A096LNI7 61 aa11.12□□□□□ -0.63
TUBA1A-203ENST00000546918 SCGB1D4Q6XE38 83 aa11.12□□□□□ -0.63
TUBA1A-203ENST00000546918 PTTG1IPP53801 180 aa11.11□□□□□ -0.63
TUBA1A-203ENST00000546918 LINC00158P58513 81 aa11.11□□□□□ -0.63
TUBA1A-203ENST00000546918 GAGE2BQ13066 116 aa11.11□□□□□ -0.63
TUBA1A-203ENST00000546918 BOD1L2Q8IYS8 172 aa11.11□□□□□ -0.63
TUBA1A-203ENST00000546918 DNAH5Q8TE73 4624 aa11.1□□□□□ -0.63
TUBA1A-203ENST00000546918 IGKV2-24A0A0C4DH68 120 aa11.1□□□□□ -0.63
TUBA1A-203ENST00000546918 A0A0U1RRA0 63 aa11.1□□□□□ -0.63
TUBA1A-203ENST00000546918 TIMM17BO60830 172 aa11.1□□□□□ -0.63
TUBA1A-203ENST00000546918 CIRBPQ14011 172 aaKnown RBP11.1□□□□□ -0.63
TUBA1A-203ENST00000546918 GAGE2EQ4V326 116 aa11.1□□□□□ -0.63
TUBA1A-203ENST00000546918 C14orf144Q96I85 54 aa11.1□□□□□ -0.63
TUBA1A-203ENST00000546918 GAGE2DQ9UEU5 116 aa11.1□□□□□ -0.63
TUBA1A-203ENST00000546918 TP73-AS1Q9UF72 201 aa11.1□□□□□ -0.63
TUBA1A-203ENST00000546918 DLEU1O43261 78 aa11.09□□□□□ -0.63
TUBA1A-203ENST00000546918 CHTF8P0CG12 524 aa11.08□□□□□ -0.64
TUBA1A-203ENST00000546918 SLC25A34Q6PIV7 304 aa11.08□□□□□ -0.64
TUBA1A-203ENST00000546918 MIR7-3HGQ8N6C7 128 aa11.08□□□□□ -0.64
TUBA1A-203ENST00000546918 LITAFQ99732 161 aa11.08□□□□□ -0.64
TUBA1A-203ENST00000546918 LINC00474Q9P2X8 69 aa11.08□□□□□ -0.64
TUBA1A-203ENST00000546918 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.08□□□□□ -0.64
TUBA1A-203ENST00000546918 TMEM238C9JI98 176 aa11.07□□□□□ -0.64
TUBA1A-203ENST00000546918 Q6ZSA8 131 aa11.07□□□□□ -0.64
TUBA1A-203ENST00000546918 SPACA4Q8TDM5 124 aa11.07□□□□□ -0.64
TUBA1A-203ENST00000546918 C12orf57Q99622 126 aa11.07□□□□□ -0.64
TUBA1A-203ENST00000546918 SND1-IT1Q9HBX3 110 aa11.07□□□□□ -0.64
TUBA1A-203ENST00000546918 XAGE1AQ9HD64 81 aa11.07□□□□□ -0.64
TUBA1A-203ENST00000546918 PANO1I0J062 215 aa11.06□□□□□ -0.64
TUBA1A-203ENST00000546918 DAND5Q8N907 189 aa11.06□□□□□ -0.64
TUBA1A-203ENST00000546918 C9orf129Q5T035 196 aaKnown RBP11.05□□□□□ -0.64
TUBA1A-203ENST00000546918 ADAMTSL4-AS1Q5T5F5 129 aa11.05□□□□□ -0.64
TUBA1A-203ENST00000546918 PKHD1P08F94 4074 aa11.05□□□□□ -0.64
TUBA1A-203ENST00000546918 FAM30AQ9NZY2 134 aa11.04□□□□□ -0.64
TUBA1A-203ENST00000546918 SPANXDQ9BXN6 97 aa11.03□□□□□ -0.64
TUBA1A-203ENST00000546918 SPANXCQ9NY87 97 aa11.03□□□□□ -0.64
TUBA1A-203ENST00000546918 LINC00518Q8N0U6 118 aa11.02□□□□□ -0.65
TUBA1A-203ENST00000546918 SPANXB1Q9NS25 103 aaPredicted RBP11.01□□□□□ -0.65
TUBA1A-203ENST00000546918 UQCR10Q9UDW1 63 aa11.01□□□□□ -0.65
TUBA1A-203ENST00000546918 DYNC1H1Q14204 4646 aaKnown RBP11.01□□□□□ -0.65
TUBA1A-203ENST00000546918 NPC2P61916 151 aa11□□□□□ -0.65
TUBA1A-203ENST00000546918 C2orf91Q6ZV80 131 aa11□□□□□ -0.65
TUBA1A-203ENST00000546918 Q6ZVH6 145 aa11□□□□□ -0.65
TUBA1A-203ENST00000546918 DPH3Q96FX2 82 aa11□□□□□ -0.65
TUBA1A-203ENST00000546918 MIEN1Q9BRT3 115 aa11□□□□□ -0.65
TUBA1A-203ENST00000546918 PRO1933Q9H354 126 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms