RNA–Protein interactions for RNA: ENST00000546155.5

LTBP4-206, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 1,285 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-206ENST00000546155 IFI27L1Q96BM0 104 aa12.75□□□□□ -0.37
LTBP4-206ENST00000546155 CAMK2N2Q96S95 79 aa12.74□□□□□ -0.37
LTBP4-206ENST00000546155 NDUFA6P56556 154 aa12.73□□□□□ -0.37
LTBP4-206ENST00000546155 LINC00469Q8N7U9 141 aa12.73□□□□□ -0.37
LTBP4-206ENST00000546155 TRAV12-1A0A0B4J245 112 aa12.72□□□□□ -0.37
LTBP4-206ENST00000546155 RNF151Q2KHN1 245 aa12.72□□□□□ -0.37
LTBP4-206ENST00000546155 STPG4Q8N801 248 aa12.72□□□□□ -0.37
LTBP4-206ENST00000546155 MRPL35Q9NZE8 188 aaKnown RBP12.72□□□□□ -0.37
LTBP4-206ENST00000546155 PLAC8Q9NZF1 115 aa12.72□□□□□ -0.37
LTBP4-206ENST00000546155 SMIM1B2RUZ4 78 aa12.71□□□□□ -0.37
LTBP4-206ENST00000546155 GAGE2BQ13066 116 aa12.71□□□□□ -0.37
LTBP4-206ENST00000546155 J3QL48 77 aa12.7□□□□□ -0.38
LTBP4-206ENST00000546155 NDUFA1O15239 70 aa12.7□□□□□ -0.38
LTBP4-206ENST00000546155 LEPROTL1O95214 131 aa12.7□□□□□ -0.38
LTBP4-206ENST00000546155 C10orf25Q5T742 122 aa12.7□□□□□ -0.38
LTBP4-206ENST00000546155 Q8IZM0 81 aa12.7□□□□□ -0.38
LTBP4-206ENST00000546155 MYCBP2O75592 4640 aa12.69□□□□□ -0.38
LTBP4-206ENST00000546155 HNRNPA3P51991 378 aaKnown RBP12.69□□□□□ -0.38
LTBP4-206ENST00000546155 COA6Q5JTJ3 125 aaKnown RBP12.69□□□□□ -0.38
LTBP4-206ENST00000546155 UNQ6190/PRO20217Q6UXQ8 127 aa12.69□□□□□ -0.38
LTBP4-206ENST00000546155 PACRGQ96M98 296 aaPredicted RBP12.69□□□□□ -0.38
LTBP4-206ENST00000546155 C11orf86A6NJI1 115 aa12.68□□□□□ -0.38
LTBP4-206ENST00000546155 ZNF22P17026 224 aaPredicted RBP12.68□□□□□ -0.38
LTBP4-206ENST00000546155 C6orf48Q9UBA6 75 aa12.68□□□□□ -0.38
LTBP4-206ENST00000546155 PKIGQ9Y2B9 76 aa12.68□□□□□ -0.38
LTBP4-206ENST00000546155 CHTOPQ9Y3Y2 248 aaKnown RBP12.68□□□□□ -0.38
LTBP4-206ENST00000546155 LOC107984640A0A0U1RRK4 108 aa12.66□□□□□ -0.38
LTBP4-206ENST00000546155 H3BRM9 83 aa12.66□□□□□ -0.38
LTBP4-206ENST00000546155 C2orf82Q6UX34 121 aa12.66□□□□□ -0.38
LTBP4-206ENST00000546155 HSPB8Q9UJY1 196 aa12.66□□□□□ -0.38
LTBP4-206ENST00000546155 IGLV5-39A0A0G2JS06 123 aa12.65□□□□□ -0.38
LTBP4-206ENST00000546155 PRSS2P07478 247 aa12.65□□□□□ -0.38
LTBP4-206ENST00000546155 SPINK8P0C7L1 97 aa12.65□□□□□ -0.38
LTBP4-206ENST00000546155 TLX1NBP0CAT3 122 aa12.65□□□□□ -0.38
LTBP4-206ENST00000546155 RPL18AQ02543 176 aaKnown RBP12.65□□□□□ -0.38
LTBP4-206ENST00000546155 C6orf226Q5I0X4 101 aa12.65□□□□□ -0.38
LTBP4-206ENST00000546155 C7orf33Q8WU49 177 aa12.65□□□□□ -0.38
LTBP4-206ENST00000546155 TOMM7Q9P0U1 55 aa12.65□□□□□ -0.38
LTBP4-206ENST00000546155 LINC00474Q9P2X8 69 aa12.65□□□□□ -0.38
LTBP4-206ENST00000546155 DMBT1Q9UGM3 2413 aaPredicted RBP12.64□□□□□ -0.39
LTBP4-206ENST00000546155 TRBV30A0A0K0K1B3 111 aa12.64□□□□□ -0.39
LTBP4-206ENST00000546155 F8VRH5 84 aa12.64□□□□□ -0.39
LTBP4-206ENST00000546155 PTTG1IPP53801 180 aa12.64□□□□□ -0.39
LTBP4-206ENST00000546155 FABP4P15090 132 aa12.63□□□□□ -0.39
LTBP4-206ENST00000546155 ODF1Q14990 250 aa12.63□□□□□ -0.39
LTBP4-206ENST00000546155 COX7B2Q8TF08 81 aa12.63□□□□□ -0.39
LTBP4-206ENST00000546155 KRTAP29-1A8MX34 341 aaPredicted RBP12.62□□□□□ -0.39
LTBP4-206ENST00000546155 CXCL5P42830 114 aa12.61□□□□□ -0.39
LTBP4-206ENST00000546155 CKS1BP61024 79 aa12.61□□□□□ -0.39
LTBP4-206ENST00000546155 A0A1W2PNN7 141 aa12.6□□□□□ -0.39
LTBP4-206ENST00000546155 TMEM170BQ5T4T1 132 aa12.6□□□□□ -0.39
LTBP4-206ENST00000546155 HERC1Q15751 4861 aa12.59□□□□□ -0.39
LTBP4-206ENST00000546155 Q6ZRP5 223 aa12.59□□□□□ -0.39
LTBP4-206ENST00000546155 TMEM223A0PJW6 202 aa12.58□□□□□ -0.4
LTBP4-206ENST00000546155 C9orf116Q5BN46 136 aaPredicted RBP12.58□□□□□ -0.4
LTBP4-206ENST00000546155 H0Y8G0 127 aa12.57□□□□□ -0.4
LTBP4-206ENST00000546155 NDUFC2-KCTD14E9PQ53 114 aa12.56□□□□□ -0.4
LTBP4-206ENST00000546155 MAP1LC3CQ9BXW4 147 aa12.56□□□□□ -0.4
LTBP4-206ENST00000546155 GAGE2EQ4V326 116 aa12.55□□□□□ -0.4
LTBP4-206ENST00000546155 GAGE2DQ9UEU5 116 aa12.55□□□□□ -0.4
LTBP4-206ENST00000546155 OXTP01178 125 aa12.54□□□□□ -0.4
LTBP4-206ENST00000546155 PRR3P79522 188 aaKnown RBP12.54□□□□□ -0.4
LTBP4-206ENST00000546155 LRP1Q07954 4544 aaKnown RBP12.53□□□□□ -0.4
LTBP4-206ENST00000546155 SYS1-DBNDD2H3BUS1 97 aa12.53□□□□□ -0.4
LTBP4-206ENST00000546155 PLNP26678 52 aa12.53□□□□□ -0.4
LTBP4-206ENST00000546155 FAM168BA1KXE4 195 aa12.51□□□□□ -0.41
LTBP4-206ENST00000546155 DPM2O94777 84 aa12.51□□□□□ -0.41
LTBP4-206ENST00000546155 PHF5AQ7RTV0 110 aaKnown RBP12.51□□□□□ -0.41
LTBP4-206ENST00000546155 ZNF625Q96I27 306 aaPredicted RBP12.51□□□□□ -0.41
LTBP4-206ENST00000546155 PMCHL2Q9BQD1 86 aa12.51□□□□□ -0.41
LTBP4-206ENST00000546155 PKHD1L1Q86WI1 4243 aa12.51□□□□□ -0.41
LTBP4-206ENST00000546155 IGKCP01834 107 aa12.49□□□□□ -0.41
LTBP4-206ENST00000546155 C9orf129Q5T035 196 aaKnown RBP12.49□□□□□ -0.41
LTBP4-206ENST00000546155 FAT3Q8TDW7 4589 aa12.48□□□□□ -0.41
LTBP4-206ENST00000546155 C3orf79P0CE67 100 aa12.48□□□□□ -0.41
LTBP4-206ENST00000546155 LINC01545Q5VT33 79 aa12.48□□□□□ -0.41
LTBP4-206ENST00000546155 SFTA2Q6UW10 78 aa12.48□□□□□ -0.41
LTBP4-206ENST00000546155 PET117Q6UWS5 81 aa12.48□□□□□ -0.41
LTBP4-206ENST00000546155 FAM19A5Q7Z5A7 132 aaPredicted RBP12.48□□□□□ -0.41
LTBP4-206ENST00000546155 KRTAP7-1Q8IUC3 87 aa12.47□□□□□ -0.41
LTBP4-206ENST00000546155 HIST3H2BBQ8N257 126 aa12.45□□□□□ -0.42
LTBP4-206ENST00000546155 LEPROTO15243 131 aa12.43□□□□□ -0.42
LTBP4-206ENST00000546155 COX17Q14061 63 aa12.43□□□□□ -0.42
LTBP4-206ENST00000546155 PSORS1C2Q9UIG4 136 aa12.43□□□□□ -0.42
LTBP4-206ENST00000546155 ERG28Q9UKR5 140 aa12.43□□□□□ -0.42
LTBP4-206ENST00000546155 TSPEAR-AS2P59090 65 aa12.42□□□□□ -0.42
LTBP4-206ENST00000546155 XAGE1AQ9HD64 81 aa12.42□□□□□ -0.42
LTBP4-206ENST00000546155 KRTDAPP60985 99 aa12.41□□□□□ -0.42
LTBP4-206ENST00000546155 PLEKHB2Q96CS7 222 aa12.41□□□□□ -0.42
LTBP4-206ENST00000546155 HIST1H2BLQ99880 126 aa12.41□□□□□ -0.42
LTBP4-206ENST00000546155 HERVK_113P61574 105 aa12.4□□□□□ -0.42
LTBP4-206ENST00000546155 C1orf137Q5JT78 98 aa12.4□□□□□ -0.42
LTBP4-206ENST00000546155 KRTAP11-1Q8IUC1 163 aa12.4□□□□□ -0.42
LTBP4-206ENST00000546155 S100A6P06703 90 aa12.39□□□□□ -0.43
LTBP4-206ENST00000546155 MT1HL1P0DM35 61 aa12.39□□□□□ -0.43
LTBP4-206ENST00000546155 PFN2P35080 140 aa12.39□□□□□ -0.43
LTBP4-206ENST00000546155 SERTAD4-AS1Q5TG53 156 aa12.39□□□□□ -0.43
LTBP4-206ENST00000546155 NDUFA12Q9UI09 145 aa12.39□□□□□ -0.43
LTBP4-206ENST00000546155 E9PLD3 99 aa12.38□□□□□ -0.43
LTBP4-206ENST00000546155 J3QQQ9 107 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms