RNA–Protein interactions for RNA: ENST00000545621.5

HMBS-222, Transcript of hydroxymethylbilane synthase, human

TSL 1 (best)

Gene HMBS, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMBS-222	ENST00000545621	BAGE3	Q86Y29	109 aa		10.07	□□□□□ -0.8
HMBS-222	ENST00000545621	DPH3	Q96FX2	82 aa		10.07	□□□□□ -0.8
HMBS-222	ENST00000545621	PACRG	Q96M98	296 aa	Predicted RBP	10.07	□□□□□ -0.8
HMBS-222	ENST00000545621	HSBP1	O75506	76 aa		10.06	□□□□□ -0.8
HMBS-222	ENST00000545621	MYCBP2	O75592	4640 aa		10.05	□□□□□ -0.8
HMBS-222	ENST00000545621	PRSS2	P07478	247 aa		10.05	□□□□□ -0.8
HMBS-222	ENST00000545621	GAGE2B	Q13066	116 aa		10.05	□□□□□ -0.8
HMBS-222	ENST00000545621		Q6ZRP5	223 aa		10.05	□□□□□ -0.8
HMBS-222	ENST00000545621	TOMM7	Q9P0U1	55 aa		10.05	□□□□□ -0.8
HMBS-222	ENST00000545621	TRAV12-1	A0A0B4J245	112 aa		10.04	□□□□□ -0.8
HMBS-222	ENST00000545621	SERF1A	O75920	110 aa		10.04	□□□□□ -0.8
HMBS-222	ENST00000545621	ZNF22	P17026	224 aa	Predicted RBP	10.04	□□□□□ -0.8
HMBS-222	ENST00000545621	CXCL5	P42830	114 aa		10.04	□□□□□ -0.8
HMBS-222	ENST00000545621	RPL18A	Q02543	176 aa	Known RBP	10.04	□□□□□ -0.8
HMBS-222	ENST00000545621	C6orf226	Q5I0X4	101 aa		10.04	□□□□□ -0.8
HMBS-222	ENST00000545621	FAM19A2	Q8N3H0	131 aa		10.04	□□□□□ -0.8
HMBS-222	ENST00000545621	IFI27L1	Q96BM0	104 aa		10.04	□□□□□ -0.8
HMBS-222	ENST00000545621	IGLV5-39	A0A0G2JS06	123 aa		10.03	□□□□□ -0.8
HMBS-222	ENST00000545621	NDUFA6	P56556	154 aa		10.03	□□□□□ -0.8
HMBS-222	ENST00000545621	CKS1B	P61024	79 aa		10.03	□□□□□ -0.8
HMBS-222	ENST00000545621	RPL37A	P61513	92 aa	Known RBP	10.03	□□□□□ -0.8
HMBS-222	ENST00000545621		A0A1W2PNN7	141 aa		10.02	□□□□□ -0.81
HMBS-222	ENST00000545621	NDUFC2-KCTD14	E9PQ53	114 aa		10.02	□□□□□ -0.81
HMBS-222	ENST00000545621		H3BRM9	83 aa		10.02	□□□□□ -0.81
HMBS-222	ENST00000545621	NUPR1	O60356	82 aa		10.02	□□□□□ -0.81
HMBS-222	ENST00000545621	SPINK8	P0C7L1	97 aa		10.02	□□□□□ -0.81
HMBS-222	ENST00000545621	C11orf86	A6NJI1	115 aa		10.01	□□□□□ -0.81
HMBS-222	ENST00000545621		F8VRH5	84 aa		10.01	□□□□□ -0.81
HMBS-222	ENST00000545621	C9orf116	Q5BN46	136 aa	Predicted RBP	10.01	□□□□□ -0.81
HMBS-222	ENST00000545621	COX7B2	Q8TF08	81 aa		10.01	□□□□□ -0.81
HMBS-222	ENST00000545621	C7orf33	Q8WU49	177 aa		10	□□□□□ -0.81
HMBS-222	ENST00000545621	CHTOP	Q9Y3Y2	248 aa	Known RBP	10	□□□□□ -0.81
HMBS-222	ENST00000545621	HIST1H2BK	O60814	126 aa		9.99	□□□□□ -0.81
HMBS-222	ENST00000545621	LEPROTL1	O95214	131 aa		9.99	□□□□□ -0.81
HMBS-222	ENST00000545621	HIST1H2BJ	P06899	126 aa		9.99	□□□□□ -0.81
HMBS-222	ENST00000545621	HIST1H2BO	P23527	126 aa		9.99	□□□□□ -0.81
HMBS-222	ENST00000545621	HIST1H2BB	P33778	126 aa		9.99	□□□□□ -0.81
HMBS-222	ENST00000545621	HIST1H2BD	P58876	126 aa		9.99	□□□□□ -0.81
HMBS-222	ENST00000545621	HIST1H2BC	P62807	126 aa		9.99	□□□□□ -0.81
HMBS-222	ENST00000545621	HIST2H2BE	Q16778	126 aa		9.99	□□□□□ -0.81
HMBS-222	ENST00000545621	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	9.99	□□□□□ -0.81
HMBS-222	ENST00000545621	HIST1H2BH	Q93079	126 aa		9.99	□□□□□ -0.81
HMBS-222	ENST00000545621	HIST1H2BN	Q99877	126 aa		9.99	□□□□□ -0.81
HMBS-222	ENST00000545621	HIST1H2BM	Q99879	126 aa		9.99	□□□□□ -0.81
HMBS-222	ENST00000545621	HNRNPA3	P51991	378 aa	Known RBP	9.97	□□□□□ -0.81
HMBS-222	ENST00000545621	LRP1	Q07954	4544 aa	Known RBP	9.96	□□□□□ -0.81
HMBS-222	ENST00000545621	ODF1	Q14990	250 aa		9.96	□□□□□ -0.82
HMBS-222	ENST00000545621	GAGE2E	Q4V326	116 aa		9.96	□□□□□ -0.82
HMBS-222	ENST00000545621	C9orf129	Q5T035	196 aa	Known RBP	9.96	□□□□□ -0.82
HMBS-222	ENST00000545621	KRTAP7-1	Q8IUC3	87 aa		9.96	□□□□□ -0.82
HMBS-222	ENST00000545621	GAGE2D	Q9UEU5	116 aa		9.96	□□□□□ -0.82
HMBS-222	ENST00000545621	FAT3	Q8TDW7	4589 aa		9.95	□□□□□ -0.82
HMBS-222	ENST00000545621	S100A1	P23297	94 aa		9.95	□□□□□ -0.82
HMBS-222	ENST00000545621	PRR3	P79522	188 aa	Known RBP	9.95	□□□□□ -0.82
HMBS-222	ENST00000545621	TMEM170B	Q5T4T1	132 aa		9.95	□□□□□ -0.82
HMBS-222	ENST00000545621	HSPB8	Q9UJY1	196 aa		9.95	□□□□□ -0.82
HMBS-222	ENST00000545621	DMBT1	Q9UGM3	2413 aa	Predicted RBP	9.94	□□□□□ -0.82
HMBS-222	ENST00000545621	TMEM223	A0PJW6	202 aa		9.94	□□□□□ -0.82
HMBS-222	ENST00000545621	FAM168B	A1KXE4	195 aa		9.94	□□□□□ -0.82
HMBS-222	ENST00000545621	COA6	Q5JTJ3	125 aa	Known RBP	9.92	□□□□□ -0.82
HMBS-222	ENST00000545621	ATP6V1G1	O75348	118 aa		9.91	□□□□□ -0.82
HMBS-222	ENST00000545621	FABP4	P15090	132 aa		9.91	□□□□□ -0.82
HMBS-222	ENST00000545621	SFTA2	Q6UW10	78 aa		9.91	□□□□□ -0.82
HMBS-222	ENST00000545621	PHF5A	Q7RTV0	110 aa	Known RBP	9.91	□□□□□ -0.82
HMBS-222	ENST00000545621	ZNF625	Q96I27	306 aa	Predicted RBP	9.91	□□□□□ -0.82
HMBS-222	ENST00000545621	KRTAP29-1	A8MX34	341 aa	Predicted RBP	9.9	□□□□□ -0.82
HMBS-222	ENST00000545621	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	9.89	□□□□□ -0.83
HMBS-222	ENST00000545621	XAGE1A	Q9HD64	81 aa		9.89	□□□□□ -0.83
HMBS-222	ENST00000545621	COX17	Q14061	63 aa		9.88	□□□□□ -0.83
HMBS-222	ENST00000545621	SERTAD4-AS1	Q5TG53	156 aa		9.88	□□□□□ -0.83
HMBS-222	ENST00000545621	PLA2G2D	Q9UNK4	145 aa		9.88	□□□□□ -0.83
HMBS-222	ENST00000545621		H0Y8G0	127 aa		9.87	□□□□□ -0.83
HMBS-222	ENST00000545621		M0QXV9	152 aa		9.87	□□□□□ -0.83
HMBS-222	ENST00000545621	PLN	P26678	52 aa		9.87	□□□□□ -0.83
HMBS-222	ENST00000545621	KRTAP11-1	Q8IUC1	163 aa		9.87	□□□□□ -0.83
HMBS-222	ENST00000545621	MAP1LC3C	Q9BXW4	147 aa		9.87	□□□□□ -0.83
HMBS-222	ENST00000545621	PSORS1C2	Q9UIG4	136 aa		9.87	□□□□□ -0.83
HMBS-222	ENST00000545621	ERG28	Q9UKR5	140 aa		9.87	□□□□□ -0.83
HMBS-222	ENST00000545621	OXT	P01178	125 aa		9.86	□□□□□ -0.83
HMBS-222	ENST00000545621	SRSF9	Q13242	221 aa	Known RBP eCLIP	9.86	□□□□□ -0.83
HMBS-222	ENST00000545621	TP73-AS1	Q9UF72	201 aa		9.86	□□□□□ -0.83
HMBS-222	ENST00000545621	DPM2	O94777	84 aa		9.85	□□□□□ -0.83
HMBS-222	ENST00000545621	SYS1-DBNDD2	H3BUS1	97 aa		9.84	□□□□□ -0.83
HMBS-222	ENST00000545621	IGKC	P01834	107 aa		9.84	□□□□□ -0.83
HMBS-222	ENST00000545621	C22orf24	Q9Y442	160 aa		9.84	□□□□□ -0.83
HMBS-222	ENST00000545621	IGLV5-37	A0A075B6J1	123 aa		9.83	□□□□□ -0.84
HMBS-222	ENST00000545621	PFN2	P35080	140 aa		9.83	□□□□□ -0.84
HMBS-222	ENST00000545621	SPINK6	Q6UWN8	80 aa		9.83	□□□□□ -0.84
HMBS-222	ENST00000545621	PMCHL2	Q9BQD1	86 aa		9.83	□□□□□ -0.84
HMBS-222	ENST00000545621	SND1-IT1	Q9HBX3	110 aa		9.82	□□□□□ -0.84
HMBS-222	ENST00000545621	HERC1	Q15751	4861 aa		9.82	□□□□□ -0.84
HMBS-222	ENST00000545621	LEPROT	O15243	131 aa		9.81	□□□□□ -0.84
HMBS-222	ENST00000545621	HERV-K104	P63124	156 aa		9.81	□□□□□ -0.84
HMBS-222	ENST00000545621	TSPEAR-AS2	P59090	65 aa		9.8	□□□□□ -0.84
HMBS-222	ENST00000545621	C1orf137	Q5JT78	98 aa		9.8	□□□□□ -0.84
HMBS-222	ENST00000545621	LINC01545	Q5VT33	79 aa		9.8	□□□□□ -0.84
HMBS-222	ENST00000545621	PET117	Q6UWS5	81 aa		9.8	□□□□□ -0.84
HMBS-222	ENST00000545621	MRPL55	Q7Z7F7	128 aa	Known RBP	9.8	□□□□□ -0.84
HMBS-222	ENST00000545621	PLEKHB2	Q96CS7	222 aa		9.8	□□□□□ -0.84
HMBS-222	ENST00000545621	NDUFA12	Q9UI09	145 aa		9.8	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 151 ms