RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 A0A096LPF7 62 aa12.2□□□□□ -0.46
SCARB1-208ENST00000544327 FAM240AA0A1B0GVK7 77 aa12.2□□□□□ -0.46
SCARB1-208ENST00000544327 DEFB4AO15263 64 aa12.19□□□□□ -0.46
SCARB1-208ENST00000544327 CD164L2Q6UWJ8 174 aa12.19□□□□□ -0.46
SCARB1-208ENST00000544327 CELA1Q9UNI1 258 aa12.18□□□□□ -0.46
SCARB1-208ENST00000544327 SPART-AS1P0CW21 52 aa12.18□□□□□ -0.46
SCARB1-208ENST00000544327 PFN2P35080 140 aa12.17□□□□□ -0.46
SCARB1-208ENST00000544327 CXCL5P42830 114 aa12.17□□□□□ -0.46
SCARB1-208ENST00000544327 LINC00269Q8N2A0 174 aa12.17□□□□□ -0.46
SCARB1-208ENST00000544327 FAM218AQ96MZ4 157 aa12.17□□□□□ -0.46
SCARB1-208ENST00000544327 CLPSL2Q6UWE3 100 aa12.16□□□□□ -0.46
SCARB1-208ENST00000544327 OTOGQ6ZRI0 2925 aa12.16□□□□□ -0.46
SCARB1-208ENST00000544327 KIAA0087Q14695 138 aa12.16□□□□□ -0.46
SCARB1-208ENST00000544327 MRPL23Q16540 153 aaKnown RBP12.16□□□□□ -0.46
SCARB1-208ENST00000544327 IGHV4-30-4P0DP06 118 aa12.15□□□□□ -0.46
SCARB1-208ENST00000544327 SMIM11BQ8TCY0 68 aa12.15□□□□□ -0.46
SCARB1-208ENST00000544327 CHCHD10Q8WYQ3 142 aaPredicted RBP12.15□□□□□ -0.46
SCARB1-208ENST00000544327 GCN1Q92616 2671 aaKnown RBP12.15□□□□□ -0.46
SCARB1-208ENST00000544327 REG3AQ06141 175 aa12.14□□□□□ -0.47
SCARB1-208ENST00000544327 LELP1Q5T871 98 aa12.14□□□□□ -0.47
SCARB1-208ENST00000544327 A0A1B0GV72 72 aa12.14□□□□□ -0.47
SCARB1-208ENST00000544327 H0YGX0 51 aa12.14□□□□□ -0.47
SCARB1-208ENST00000544327 FN1P02751 2386 aaKnown RBP12.13□□□□□ -0.47
SCARB1-208ENST00000544327 ANGP03950 147 aaKnown RBP12.13□□□□□ -0.47
SCARB1-208ENST00000544327 BAALC-AS2P0C853 105 aa12.13□□□□□ -0.47
SCARB1-208ENST00000544327 COX17Q14061 63 aa12.13□□□□□ -0.47
SCARB1-208ENST00000544327 C11orf68Q9H3H3 251 aaKnown RBP12.12□□□□□ -0.47
SCARB1-208ENST00000544327 C22orf24Q9Y442 160 aa12.12□□□□□ -0.47
SCARB1-208ENST00000544327 CKS1BP61024 79 aa12.11□□□□□ -0.47
SCARB1-208ENST00000544327 NSD1Q96L73 2696 aaPredicted RBP12.11□□□□□ -0.47
SCARB1-208ENST00000544327 SNCGO76070 127 aa12.11□□□□□ -0.47
SCARB1-208ENST00000544327 ACYP1P07311 99 aa12.1□□□□□ -0.47
SCARB1-208ENST00000544327 Q6Q795 121 aa12.1□□□□□ -0.47
SCARB1-208ENST00000544327 Q8N3U1 123 aa12.1□□□□□ -0.47
SCARB1-208ENST00000544327 HECTD1Q9ULT8 2610 aa12.1□□□□□ -0.47
SCARB1-208ENST00000544327 NDUFC2O95298 119 aa12.09□□□□□ -0.47
SCARB1-208ENST00000544327 C15orf53Q8NAA6 179 aa12.09□□□□□ -0.47
SCARB1-208ENST00000544327 PRR34Q9NV39 138 aa12.08□□□□□ -0.48
SCARB1-208ENST00000544327 KLK5Q9Y337 293 aaPredicted RBP12.08□□□□□ -0.48
SCARB1-208ENST00000544327 VWFP04275 2813 aa12.08□□□□□ -0.48
SCARB1-208ENST00000544327 MALP21145 153 aa12.07□□□□□ -0.48
SCARB1-208ENST00000544327 MUC7Q8TAX7 377 aa12.07□□□□□ -0.48
SCARB1-208ENST00000544327 IGLV10-54A0A075B6I4 117 aa12.06□□□□□ -0.48
SCARB1-208ENST00000544327 A0A087WYN8 130 aa12.06□□□□□ -0.48
SCARB1-208ENST00000544327 HTN3P15516 51 aa12.06□□□□□ -0.48
SCARB1-208ENST00000544327 GAGE2BQ13066 116 aa12.06□□□□□ -0.48
SCARB1-208ENST00000544327 GAGE2EQ4V326 116 aa12.06□□□□□ -0.48
SCARB1-208ENST00000544327 GAGE2DQ9UEU5 116 aa12.06□□□□□ -0.48
SCARB1-208ENST00000544327 NOTCH2Q04721 2471 aa12.06□□□□□ -0.48
SCARB1-208ENST00000544327 Q9HAA7 133 aa12.05□□□□□ -0.48
SCARB1-208ENST00000544327 DNAL4O96015 105 aa12.04□□□□□ -0.48
SCARB1-208ENST00000544327 INAFM2P0DMQ5 153 aa12.04□□□□□ -0.48
SCARB1-208ENST00000544327 OR13C6PQ8NH95 151 aa12.04□□□□□ -0.48
SCARB1-208ENST00000544327 H3BNG1 76 aa12.03□□□□□ -0.48
SCARB1-208ENST00000544327 NANOS2P60321 138 aaKnown RBP12.02□□□□□ -0.49
SCARB1-208ENST00000544327 LYPD5Q6UWN5 251 aa12.02□□□□□ -0.49
SCARB1-208ENST00000544327 A0A1B0GX51 115 aa12.01□□□□□ -0.49
SCARB1-208ENST00000544327 SDIM1Q6ZPB5 146 aa12.01□□□□□ -0.49
SCARB1-208ENST00000544327 OBSCN-AS1Q96MR7 158 aa12.01□□□□□ -0.49
SCARB1-208ENST00000544327 SPAG11BQ08648 103 aa12□□□□□ -0.49
SCARB1-208ENST00000544327 ENHOQ6UWT2 76 aa12□□□□□ -0.49
SCARB1-208ENST00000544327 LINC00167Q96N53 147 aa12□□□□□ -0.49
SCARB1-208ENST00000544327 A0A0J9YWU9 116 aa12□□□□□ -0.49
SCARB1-208ENST00000544327 TTC32Q5I0X7 151 aa12□□□□□ -0.49
SCARB1-208ENST00000544327 TENM1Q9UKZ4 2725 aa11.99□□□□□ -0.49
SCARB1-208ENST00000544327 NBEAL2Q6ZNJ1 2754 aa11.99□□□□□ -0.49
SCARB1-208ENST00000544327 TRBV7-7A0A0K0K1E9 115 aa11.99□□□□□ -0.49
SCARB1-208ENST00000544327 LECT2O14960 151 aa11.99□□□□□ -0.49
SCARB1-208ENST00000544327 KRTAP10-11P60412 298 aa11.99□□□□□ -0.49
SCARB1-208ENST00000544327 EGFEM1PQ0D2K5 195 aa11.99□□□□□ -0.49
SCARB1-208ENST00000544327 TMEM126AQ9H061 195 aa11.99□□□□□ -0.49
SCARB1-208ENST00000544327 KLK12Q9UKR0 248 aa11.99□□□□□ -0.49
SCARB1-208ENST00000544327 HIVEP1P15822 2718 aa11.99□□□□□ -0.49
SCARB1-208ENST00000544327 GVQW2A0A096LPI5 108 aaPredicted RBP11.97□□□□□ -0.49
SCARB1-208ENST00000544327 C9orf116Q5BN46 136 aaPredicted RBP11.97□□□□□ -0.49
SCARB1-208ENST00000544327 OXLD1Q5BKU9 147 aa11.97□□□□□ -0.49
SCARB1-208ENST00000544327 PRR3P79522 188 aaKnown RBP11.96□□□□□ -0.49
SCARB1-208ENST00000544327 UNQ6190/PRO20217Q6UXQ8 127 aa11.96□□□□□ -0.49
SCARB1-208ENST00000544327 ANAPC13Q9BS18 74 aa11.96□□□□□ -0.49
SCARB1-208ENST00000544327 NDUFV3P56181 108 aaKnown RBP11.95□□□□□ -0.5
SCARB1-208ENST00000544327 C10orf25Q5T742 122 aa11.95□□□□□ -0.5
SCARB1-208ENST00000544327 TEP1Q99973 2627 aaKnown RBP11.95□□□□□ -0.5
SCARB1-208ENST00000544327 LINC00643Q86TS7 51 aa11.95□□□□□ -0.5
SCARB1-208ENST00000544327 C6orf223Q8N319 242 aa11.95□□□□□ -0.5
SCARB1-208ENST00000544327 CYSRT1A8MQ03 144 aa11.94□□□□□ -0.5
SCARB1-208ENST00000544327 IMUPQ9GZP8 106 aa11.94□□□□□ -0.5
SCARB1-208ENST00000544327 RETNQ9HD89 108 aa11.94□□□□□ -0.5
SCARB1-208ENST00000544327 ORMDL1Q9P0S3 153 aa11.94□□□□□ -0.5
SCARB1-208ENST00000544327 KPRPQ5T749 579 aaPredicted RBP11.93□□□□□ -0.5
SCARB1-208ENST00000544327 Q8NDZ9 215 aa11.93□□□□□ -0.5
SCARB1-208ENST00000544327 SMCR5Q8TEV8 140 aa11.93□□□□□ -0.5
SCARB1-208ENST00000544327 NHLRC4P0CG21 123 aaPredicted RBP11.93□□□□□ -0.5
SCARB1-208ENST00000544327 KRTAP24-1Q3LI83 254 aa11.91□□□□□ -0.5
SCARB1-208ENST00000544327 C9orf129Q5T035 196 aaKnown RBP11.91□□□□□ -0.5
SCARB1-208ENST00000544327 Q8N814 137 aa11.91□□□□□ -0.5
SCARB1-208ENST00000544327 NCR3O14931 201 aa11.9□□□□□ -0.5
SCARB1-208ENST00000544327 GAGE2AQ6NT46 116 aa11.9□□□□□ -0.5
SCARB1-208ENST00000544327 ATRQ13535 2644 aa11.9□□□□□ -0.5
SCARB1-208ENST00000544327 SLPIP03973 132 aa11.89□□□□□ -0.51
SCARB1-208ENST00000544327 KRTAP26-1Q6PEX3 210 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms