RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 TMEM223A0PJW6 202 aa9.35□□□□□ -0.91
TNFRSF1A-216ENST00000543995 LINC01545Q5VT33 79 aa9.35□□□□□ -0.91
TNFRSF1A-216ENST00000543995 UNQ6190/PRO20217Q6UXQ8 127 aa9.35□□□□□ -0.91
TNFRSF1A-216ENST00000543995 CXCL5P42830 114 aa9.34□□□□□ -0.91
TNFRSF1A-216ENST00000543995 IGLV5-39A0A0G2JS06 123 aa9.33□□□□□ -0.92
TNFRSF1A-216ENST00000543995 C20orf202A1L168 122 aa9.33□□□□□ -0.92
TNFRSF1A-216ENST00000543995 C10orf25Q5T742 122 aa9.33□□□□□ -0.92
TNFRSF1A-216ENST00000543995 SDIM1Q6ZPB5 146 aa9.32□□□□□ -0.92
TNFRSF1A-216ENST00000543995 PKIGQ9Y2B9 76 aa9.32□□□□□ -0.92
TNFRSF1A-216ENST00000543995 DYNC1H1Q14204 4646 aaKnown RBP9.31□□□□□ -0.92
TNFRSF1A-216ENST00000543995 HERVK_113P61574 105 aa9.31□□□□□ -0.92
TNFRSF1A-216ENST00000543995 C6orf48Q9UBA6 75 aa9.31□□□□□ -0.92
TNFRSF1A-216ENST00000543995 TRBV30A0A0K0K1B3 111 aa9.31□□□□□ -0.92
TNFRSF1A-216ENST00000543995 RNF151Q2KHN1 245 aa9.31□□□□□ -0.92
TNFRSF1A-216ENST00000543995 LOC107984640A0A0U1RRK4 108 aa9.3□□□□□ -0.92
TNFRSF1A-216ENST00000543995 LOC105371267A0A1B0GV96 52 aa9.3□□□□□ -0.92
TNFRSF1A-216ENST00000543995 IGKV2-24A0A0C4DH68 120 aa9.29□□□□□ -0.92
TNFRSF1A-216ENST00000543995 RPL18AQ02543 176 aaKnown RBP9.29□□□□□ -0.92
TNFRSF1A-216ENST00000543995 DPH3Q96FX2 82 aa9.29□□□□□ -0.92
TNFRSF1A-216ENST00000543995 FAM30AQ9NZY2 134 aa9.29□□□□□ -0.92
TNFRSF1A-216ENST00000543995 C9orf116Q5BN46 136 aaPredicted RBP9.28□□□□□ -0.92
TNFRSF1A-216ENST00000543995 A0A096LNI7 61 aa9.27□□□□□ -0.93
TNFRSF1A-216ENST00000543995 CHTF8P0CG12 524 aa9.27□□□□□ -0.93
TNFRSF1A-216ENST00000543995 GAGE2BQ13066 116 aa9.27□□□□□ -0.93
TNFRSF1A-216ENST00000543995 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.27□□□□□ -0.93
TNFRSF1A-216ENST00000543995 LRP1BQ9NZR2 4599 aa9.27□□□□□ -0.93
TNFRSF1A-216ENST00000543995 LEPROTO15243 131 aa9.26□□□□□ -0.93
TNFRSF1A-216ENST00000543995 AKR1D1P51857 326 aa9.26□□□□□ -0.93
TNFRSF1A-216ENST00000543995 SFTA2Q6UW10 78 aa9.26□□□□□ -0.93
TNFRSF1A-216ENST00000543995 Q6ZSA8 131 aa9.26□□□□□ -0.93
TNFRSF1A-216ENST00000543995 ATOH7Q8N100 152 aa9.26□□□□□ -0.93
TNFRSF1A-216ENST00000543995 PLEKHB2Q96CS7 222 aa9.26□□□□□ -0.93
TNFRSF1A-216ENST00000543995 CDK2AP2O75956 126 aa9.26□□□□□ -0.93
TNFRSF1A-216ENST00000543995 HAMPP81172 84 aa9.26□□□□□ -0.93
TNFRSF1A-216ENST00000543995 MAJINQ3KP22 176 aa9.26□□□□□ -0.93
TNFRSF1A-216ENST00000543995 STPG4Q8N801 248 aa9.26□□□□□ -0.93
TNFRSF1A-216ENST00000543995 NDUFC2-KCTD14E9PQ53 114 aa9.25□□□□□ -0.93
TNFRSF1A-216ENST00000543995 TLX1NBP0CAT3 122 aa9.25□□□□□ -0.93
TNFRSF1A-216ENST00000543995 LGALS3P17931 250 aaKnown RBP9.25□□□□□ -0.93
TNFRSF1A-216ENST00000543995 PTTG1IPP53801 180 aa9.25□□□□□ -0.93
TNFRSF1A-216ENST00000543995 GAGE2EQ4V326 116 aa9.25□□□□□ -0.93
TNFRSF1A-216ENST00000543995 ZNF625Q96I27 306 aaPredicted RBP9.25□□□□□ -0.93
TNFRSF1A-216ENST00000543995 LINC00474Q9P2X8 69 aa9.25□□□□□ -0.93
TNFRSF1A-216ENST00000543995 GAGE2DQ9UEU5 116 aa9.25□□□□□ -0.93
TNFRSF1A-216ENST00000543995 E9PLD3 99 aa9.24□□□□□ -0.93
TNFRSF1A-216ENST00000543995 PANO1I0J062 215 aa9.24□□□□□ -0.93
TNFRSF1A-216ENST00000543995 J3QQQ9 107 aa9.24□□□□□ -0.93
TNFRSF1A-216ENST00000543995 SCGB1D1O95968 90 aa9.24□□□□□ -0.93
TNFRSF1A-216ENST00000543995 XGP55808 180 aa9.24□□□□□ -0.93
TNFRSF1A-216ENST00000543995 Q6ZRP5 223 aa9.24□□□□□ -0.93
TNFRSF1A-216ENST00000543995 SPACA4Q8TDM5 124 aa9.24□□□□□ -0.93
TNFRSF1A-216ENST00000543995 TSPEAR-AS2P59090 65 aa9.23□□□□□ -0.93
TNFRSF1A-216ENST00000543995 NDUFA12Q9UI09 145 aa9.23□□□□□ -0.93
TNFRSF1A-216ENST00000543995 MYMXA0A1B0GTQ4 84 aa9.22□□□□□ -0.93
TNFRSF1A-216ENST00000543995 PFN2P35080 140 aa9.22□□□□□ -0.93
TNFRSF1A-216ENST00000543995 CIRBPQ14011 172 aaKnown RBP9.22□□□□□ -0.93
TNFRSF1A-216ENST00000543995 JOSD1Q15040 202 aaPredicted RBP9.22□□□□□ -0.93
TNFRSF1A-216ENST00000543995 SCXQ7RTU7 201 aa9.22□□□□□ -0.93
TNFRSF1A-216ENST00000543995 BIRC6Q9NR09 4857 aa9.22□□□□□ -0.93
TNFRSF1A-216ENST00000543995 HERV-K104P63124 156 aa9.21□□□□□ -0.93
TNFRSF1A-216ENST00000543995 PYY3Q5JQD4 70 aa9.21□□□□□ -0.93
TNFRSF1A-216ENST00000543995 CIRBP-AS1Q8TBR5 109 aa9.21□□□□□ -0.93
TNFRSF1A-216ENST00000543995 ERG28Q9UKR5 140 aa9.21□□□□□ -0.93
TNFRSF1A-216ENST00000543995 A0A087WYN8 130 aa9.21□□□□□ -0.94
TNFRSF1A-216ENST00000543995 NMUP48645 174 aa9.21□□□□□ -0.94
TNFRSF1A-216ENST00000543995 MEIG1Q5JSS6 88 aa9.21□□□□□ -0.94
TNFRSF1A-216ENST00000543995 DNAH8Q96JB1 4490 aa9.2□□□□□ -0.94
TNFRSF1A-216ENST00000543995 COX17Q14061 63 aa9.2□□□□□ -0.94
TNFRSF1A-216ENST00000543995 HSBP1L1C9JCN9 74 aa9.19□□□□□ -0.94
TNFRSF1A-216ENST00000543995 LINC00158P58513 81 aa9.19□□□□□ -0.94
TNFRSF1A-216ENST00000543995 IGKV2D-26A0A0A0MRZ7 120 aa9.18□□□□□ -0.94
TNFRSF1A-216ENST00000543995 A0A0U1RRA0 63 aa9.18□□□□□ -0.94
TNFRSF1A-216ENST00000543995 XAGE1AQ9HD64 81 aa9.18□□□□□ -0.94
TNFRSF1A-216ENST00000543995 APOBP04114 4563 aaKnown RBP9.17□□□□□ -0.94
TNFRSF1A-216ENST00000543995 LINC00587B1AMM8 73 aa9.17□□□□□ -0.94
TNFRSF1A-216ENST00000543995 ANKRD39Q53RE8 183 aa9.17□□□□□ -0.94
TNFRSF1A-216ENST00000543995 SMIM13P0DJ93 91 aa9.16□□□□□ -0.94
TNFRSF1A-216ENST00000543995 C9orf129Q5T035 196 aaKnown RBP9.16□□□□□ -0.94
TNFRSF1A-216ENST00000543995 PLAC8Q9NZF1 115 aa9.16□□□□□ -0.94
TNFRSF1A-216ENST00000543995 ZNF815PA8K554 130 aa9.15□□□□□ -0.94
TNFRSF1A-216ENST00000543995 SMR3BP02814 79 aaPredicted RBP9.15□□□□□ -0.94
TNFRSF1A-216ENST00000543995 A0A1W2PNN7 141 aa9.15□□□□□ -0.95
TNFRSF1A-216ENST00000543995 FAM168BA1KXE4 195 aa9.15□□□□□ -0.95
TNFRSF1A-216ENST00000543995 FAM19A5Q7Z5A7 132 aaPredicted RBP9.15□□□□□ -0.95
TNFRSF1A-216ENST00000543995 TTTY13Q9BZ97 58 aa9.15□□□□□ -0.95
TNFRSF1A-216ENST00000543995 A0A0J9YXY3 114 aa9.13□□□□□ -0.95
TNFRSF1A-216ENST00000543995 MIR7-3HGQ8N6C7 128 aa9.13□□□□□ -0.95
TNFRSF1A-216ENST00000543995 SND1-IT1Q9HBX3 110 aa9.13□□□□□ -0.95
TNFRSF1A-216ENST00000543995 PCP2Q8IVA1 136 aa9.11□□□□□ -0.95
TNFRSF1A-216ENST00000543995 HSPG2P98160 4391 aa9.11□□□□□ -0.95
TNFRSF1A-216ENST00000543995 SMIM6P0DI80 62 aa9.1□□□□□ -0.95
TNFRSF1A-216ENST00000543995 SCGB1D4Q6XE38 83 aa9.1□□□□□ -0.95
TNFRSF1A-216ENST00000543995 LINC00528Q8N1L1 170 aa9.1□□□□□ -0.95
TNFRSF1A-216ENST00000543995 DAND5Q8N907 189 aa9.1□□□□□ -0.95
TNFRSF1A-216ENST00000543995 M0QXV9 152 aa9.1□□□□□ -0.95
TNFRSF1A-216ENST00000543995 SERTAD4-AS1Q5TG53 156 aa9.1□□□□□ -0.95
TNFRSF1A-216ENST00000543995 C7orf33Q8WU49 177 aa9.1□□□□□ -0.95
TNFRSF1A-216ENST00000543995 PAM16Q9Y3D7 125 aa9.1□□□□□ -0.95
TNFRSF1A-216ENST00000543995 RYR1P21817 5038 aa9.09□□□□□ -0.95
TNFRSF1A-216ENST00000543995 KIAA1109Q2LD37 5005 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms