RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 PRSS2P07478 247 aa9.62□□□□□ -0.87
CD9-210ENST00000543916 RNF151Q2KHN1 245 aa9.62□□□□□ -0.87
CD9-210ENST00000543916 COA6Q5JTJ3 125 aaKnown RBP9.62□□□□□ -0.87
CD9-210ENST00000543916 SPACA4Q8TDM5 124 aa9.62□□□□□ -0.87
CD9-210ENST00000543916 C6orf48Q9UBA6 75 aa9.62□□□□□ -0.87
CD9-210ENST00000543916 HSPB8Q9UJY1 196 aa9.62□□□□□ -0.87
CD9-210ENST00000543916 IGKV2-24A0A0C4DH68 120 aa9.61□□□□□ -0.87
CD9-210ENST00000543916 F8VRH5 84 aa9.61□□□□□ -0.87
CD9-210ENST00000543916 H3BRM9 83 aa9.61□□□□□ -0.87
CD9-210ENST00000543916 ODF1Q14990 250 aa9.61□□□□□ -0.87
CD9-210ENST00000543916 Q8N1X5 172 aa9.61□□□□□ -0.87
CD9-210ENST00000543916 LOC107984640A0A0U1RRK4 108 aa9.6□□□□□ -0.87
CD9-210ENST00000543916 C6orf226Q5I0X4 101 aa9.6□□□□□ -0.87
CD9-210ENST00000543916 COX7B2Q8TF08 81 aa9.6□□□□□ -0.87
CD9-210ENST00000543916 IGLV5-39A0A0G2JS06 123 aa9.59□□□□□ -0.87
CD9-210ENST00000543916 CKS1BP61024 79 aa9.59□□□□□ -0.87
CD9-210ENST00000543916 TMEM170BQ5T4T1 132 aa9.59□□□□□ -0.87
CD9-210ENST00000543916 PKIGQ9Y2B9 76 aa9.59□□□□□ -0.87
CD9-210ENST00000543916 TRBV30A0A0K0K1B3 111 aa9.58□□□□□ -0.88
CD9-210ENST00000543916 MAJINQ3KP22 176 aa9.58□□□□□ -0.88
CD9-210ENST00000543916 KRTAP4-5Q9BYR2 181 aa9.58□□□□□ -0.88
CD9-210ENST00000543916 A0A087WYN8 130 aa9.57□□□□□ -0.88
CD9-210ENST00000543916 PTTG1IPP53801 180 aa9.57□□□□□ -0.88
CD9-210ENST00000543916 RPL18AQ02543 176 aaKnown RBP9.57□□□□□ -0.88
CD9-210ENST00000543916 GAGE2BQ13066 116 aa9.57□□□□□ -0.88
CD9-210ENST00000543916 C9orf116Q5BN46 136 aaPredicted RBP9.57□□□□□ -0.88
CD9-210ENST00000543916 CXCL5P42830 114 aa9.56□□□□□ -0.88
CD9-210ENST00000543916 DPH3Q96FX2 82 aa9.56□□□□□ -0.88
CD9-210ENST00000543916 PMCHL2Q9BQD1 86 aa9.56□□□□□ -0.88
CD9-210ENST00000543916 MAP1LC3CQ9BXW4 147 aa9.56□□□□□ -0.88
CD9-210ENST00000543916 TMEM223A0PJW6 202 aa9.55□□□□□ -0.88
CD9-210ENST00000543916 TLX1NBP0CAT3 122 aa9.55□□□□□ -0.88
CD9-210ENST00000543916 Q6ZRP5 223 aa9.55□□□□□ -0.88
CD9-210ENST00000543916 STPG4Q8N801 248 aa9.55□□□□□ -0.88
CD9-210ENST00000543916 PLAC8Q9NZF1 115 aa9.55□□□□□ -0.88
CD9-210ENST00000543916 LINC00474Q9P2X8 69 aa9.55□□□□□ -0.88
CD9-210ENST00000543916 Q5VSD8 79 aa9.54□□□□□ -0.88
CD9-210ENST00000543916 LINC00528Q8N1L1 170 aa9.54□□□□□ -0.88
CD9-210ENST00000543916 SYS1-DBNDD2H3BUS1 97 aa9.53□□□□□ -0.88
CD9-210ENST00000543916 PLNP26678 52 aa9.53□□□□□ -0.88
CD9-210ENST00000543916 EPM2AB3EWF7 344 aa9.52□□□□□ -0.89
CD9-210ENST00000543916 NDUFC2-KCTD14E9PQ53 114 aa9.52□□□□□ -0.89
CD9-210ENST00000543916 DPM2O94777 84 aa9.52□□□□□ -0.89
CD9-210ENST00000543916 FAT1Q14517 4588 aa9.51□□□□□ -0.89
CD9-210ENST00000543916 FAM229AH3BQW9 127 aa9.51□□□□□ -0.89
CD9-210ENST00000543916 C3orf79P0CE67 100 aa9.51□□□□□ -0.89
CD9-210ENST00000543916 GAGE2EQ4V326 116 aa9.51□□□□□ -0.89
CD9-210ENST00000543916 GAGE2DQ9UEU5 116 aa9.51□□□□□ -0.89
CD9-210ENST00000543916 A0A1W2PNN7 141 aa9.5□□□□□ -0.89
CD9-210ENST00000543916 IGKCP01834 107 aa9.5□□□□□ -0.89
CD9-210ENST00000543916 ABCA13Q86UQ4 5058 aa9.49□□□□□ -0.89
CD9-210ENST00000543916 LINC01545Q5VT33 79 aa9.49□□□□□ -0.89
CD9-210ENST00000543916 HIST3H2BBQ8N257 126 aa9.49□□□□□ -0.89
CD9-210ENST00000543916 VPS13BQ7Z7G8 4022 aa9.49□□□□□ -0.89
CD9-210ENST00000543916 FAM168BA1KXE4 195 aa9.48□□□□□ -0.89
CD9-210ENST00000543916 KRTDAPP60985 99 aa9.48□□□□□ -0.89
CD9-210ENST00000543916 C9orf129Q5T035 196 aaKnown RBP9.48□□□□□ -0.89
CD9-210ENST00000543916 PET117Q6UWS5 81 aa9.48□□□□□ -0.89
CD9-210ENST00000543916 ZNF625Q96I27 306 aaPredicted RBP9.48□□□□□ -0.89
CD9-210ENST00000543916 SRRM2Q9UQ35 2752 aaKnown RBP9.46□□□□□ -0.89
CD9-210ENST00000543916 TSPEAR-AS2P59090 65 aa9.46□□□□□ -0.9
CD9-210ENST00000543916 KRTAP10-4P60372 401 aaPredicted RBP9.46□□□□□ -0.9
CD9-210ENST00000543916 LEPROTO15243 131 aa9.45□□□□□ -0.9
CD9-210ENST00000543916 PLA2G1BP04054 148 aaKnown RBP9.45□□□□□ -0.9
CD9-210ENST00000543916 S100A6P06703 90 aa9.45□□□□□ -0.9
CD9-210ENST00000543916 SFTA2Q6UW10 78 aa9.45□□□□□ -0.9
CD9-210ENST00000543916 FAM19A5Q7Z5A7 132 aaPredicted RBP9.45□□□□□ -0.9
CD9-210ENST00000543916 KRTAP7-1Q8IUC3 87 aa9.45□□□□□ -0.9
CD9-210ENST00000543916 HIST1H2BLQ99880 126 aa9.45□□□□□ -0.9
CD9-210ENST00000543916 XAGE1AQ9HD64 81 aa9.45□□□□□ -0.9
CD9-210ENST00000543916 ERG28Q9UKR5 140 aa9.45□□□□□ -0.9
CD9-210ENST00000543916 PCLOQ9Y6V0 5065 aa9.44□□□□□ -0.9
CD9-210ENST00000543916 PFN2P35080 140 aa9.44□□□□□ -0.9
CD9-210ENST00000543916 RPL37AP61513 92 aaKnown RBP9.44□□□□□ -0.9
CD9-210ENST00000543916 HERVK_113P61574 105 aa9.44□□□□□ -0.9
CD9-210ENST00000543916 S100A2P29034 98 aa9.43□□□□□ -0.9
CD9-210ENST00000543916 SNRPEP62304 92 aaKnown RBP9.43□□□□□ -0.9
CD9-210ENST00000543916 C7orf33Q8WU49 177 aa9.43□□□□□ -0.9
CD9-210ENST00000543916 PLEKHB2Q96CS7 222 aa9.43□□□□□ -0.9
CD9-210ENST00000543916 J3QQQ9 107 aa9.42□□□□□ -0.9
CD9-210ENST00000543916 PHF5AQ7RTV0 110 aaKnown RBP9.42□□□□□ -0.9
CD9-210ENST00000543916 NDUFA12Q9UI09 145 aa9.42□□□□□ -0.9
CD9-210ENST00000543916 COX17Q14061 63 aa9.41□□□□□ -0.9
CD9-210ENST00000543916 SERTAD4-AS1Q5TG53 156 aa9.41□□□□□ -0.9
CD9-210ENST00000543916 C5orf52A6NGY3 159 aa9.4□□□□□ -0.9
CD9-210ENST00000543916 E9PLD3 99 aa9.4□□□□□ -0.9
CD9-210ENST00000543916 MYMXA0A1B0GTQ4 84 aa9.39□□□□□ -0.91
CD9-210ENST00000543916 C20orf202A1L168 122 aa9.39□□□□□ -0.91
CD9-210ENST00000543916 M0QXV9 152 aa9.39□□□□□ -0.91
CD9-210ENST00000543916 HERV-K104P63124 156 aa9.39□□□□□ -0.91
CD9-210ENST00000543916 SND1-IT1Q9HBX3 110 aa9.39□□□□□ -0.91
CD9-210ENST00000543916 A0A0U1RRA0 63 aa9.38□□□□□ -0.91
CD9-210ENST00000543916 SMIM13P0DJ93 91 aa9.38□□□□□ -0.91
CD9-210ENST00000543916 INAFM2P0DMQ5 153 aa9.38□□□□□ -0.91
CD9-210ENST00000543916 LGALS3P17931 250 aaKnown RBP9.38□□□□□ -0.91
CD9-210ENST00000543916 LINC00158P58513 81 aa9.38□□□□□ -0.91
CD9-210ENST00000543916 ATOH7Q8N100 152 aa9.38□□□□□ -0.91
CD9-210ENST00000543916 PRR3P79522 188 aaKnown RBP9.37□□□□□ -0.91
CD9-210ENST00000543916 MEIG1Q5JSS6 88 aa9.37□□□□□ -0.91
CD9-210ENST00000543916 KRTAP11-1Q8IUC1 163 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms