RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545		F8WDY8	70 aa		6.6	□□□□□ -1.35
CPSF7-221	ENST00000543545	LINC01620	Q4KN68	170 aa		6.6	□□□□□ -1.35
CPSF7-221	ENST00000543545	UNQ6190/PRO20217	Q6UXQ8	127 aa		6.6	□□□□□ -1.35
CPSF7-221	ENST00000543545		Q6ZRU5	148 aa		6.6	□□□□□ -1.35
CPSF7-221	ENST00000543545	ATOH7	Q8N100	152 aa		6.6	□□□□□ -1.35
CPSF7-221	ENST00000543545	CXCL5	P42830	114 aa		6.59	□□□□□ -1.35
CPSF7-221	ENST00000543545	C10orf25	Q5T742	122 aa		6.59	□□□□□ -1.35
CPSF7-221	ENST00000543545	STPG4	Q8N801	248 aa		6.59	□□□□□ -1.35
CPSF7-221	ENST00000543545	PLEKHB2	Q96CS7	222 aa		6.59	□□□□□ -1.35
CPSF7-221	ENST00000543545	LEPROT	O15243	131 aa		6.58	□□□□□ -1.36
CPSF7-221	ENST00000543545	LGALS3	P17931	250 aa	Known RBP	6.58	□□□□□ -1.36
CPSF7-221	ENST00000543545	C9orf163	Q8N9P6	203 aa		6.58	□□□□□ -1.36
CPSF7-221	ENST00000543545	HSBP1L1	C9JCN9	74 aa		6.57	□□□□□ -1.36
CPSF7-221	ENST00000543545	DPH3	Q96FX2	82 aa		6.57	□□□□□ -1.36
CPSF7-221	ENST00000543545	C6orf48	Q9UBA6	75 aa		6.57	□□□□□ -1.36
CPSF7-221	ENST00000543545	PKIG	Q9Y2B9	76 aa		6.57	□□□□□ -1.36
CPSF7-221	ENST00000543545	TRBV30	A0A0K0K1B3	111 aa		6.56	□□□□□ -1.36
CPSF7-221	ENST00000543545		J3QQQ9	107 aa		6.56	□□□□□ -1.36
CPSF7-221	ENST00000543545	KRTAP10-1	P60331	282 aa		6.56	□□□□□ -1.36
CPSF7-221	ENST00000543545	RNF151	Q2KHN1	245 aa		6.56	□□□□□ -1.36
CPSF7-221	ENST00000543545	ZNF625	Q96I27	306 aa	Predicted RBP	6.56	□□□□□ -1.36
CPSF7-221	ENST00000543545	NDUFA12	Q9UI09	145 aa		6.56	□□□□□ -1.36
CPSF7-221	ENST00000543545	LOC107984640	A0A0U1RRK4	108 aa		6.55	□□□□□ -1.36
CPSF7-221	ENST00000543545	MYMX	A0A1B0GTQ4	84 aa		6.55	□□□□□ -1.36
CPSF7-221	ENST00000543545		E9PLD3	99 aa		6.55	□□□□□ -1.36
CPSF7-221	ENST00000543545	RPL18A	Q02543	176 aa	Known RBP	6.55	□□□□□ -1.36
CPSF7-221	ENST00000543545	GAGE2B	Q13066	116 aa		6.55	□□□□□ -1.36
CPSF7-221	ENST00000543545	C9orf116	Q5BN46	136 aa	Predicted RBP	6.55	□□□□□ -1.36
CPSF7-221	ENST00000543545	SFTA2	Q6UW10	78 aa		6.55	□□□□□ -1.36
CPSF7-221	ENST00000543545	SDIM1	Q6ZPB5	146 aa		6.55	□□□□□ -1.36
CPSF7-221	ENST00000543545	DYNC1H1	Q14204	4646 aa	Known RBP	6.54	□□□□□ -1.36
CPSF7-221	ENST00000543545	IGKV2-24	A0A0C4DH68	120 aa		6.54	□□□□□ -1.36
CPSF7-221	ENST00000543545	PFN2	P35080	140 aa		6.54	□□□□□ -1.36
CPSF7-221	ENST00000543545	NMU	P48645	174 aa		6.54	□□□□□ -1.36
CPSF7-221	ENST00000543545	TSPEAR-AS2	P59090	65 aa		6.54	□□□□□ -1.36
CPSF7-221	ENST00000543545	JOSD1	Q15040	202 aa	Predicted RBP	6.54	□□□□□ -1.36
CPSF7-221	ENST00000543545	GAGE2E	Q4V326	116 aa		6.54	□□□□□ -1.36
CPSF7-221	ENST00000543545	GAGE2D	Q9UEU5	116 aa		6.54	□□□□□ -1.36
CPSF7-221	ENST00000543545	DNAH5	Q8TE73	4624 aa		6.54	□□□□□ -1.36
CPSF7-221	ENST00000543545	HERV-K104	P63124	156 aa		6.53	□□□□□ -1.36
CPSF7-221	ENST00000543545	MAJIN	Q3KP22	176 aa		6.53	□□□□□ -1.36
CPSF7-221	ENST00000543545	ANKRD39	Q53RE8	183 aa		6.53	□□□□□ -1.36
CPSF7-221	ENST00000543545	MEIG1	Q5JSS6	88 aa		6.53	□□□□□ -1.36
CPSF7-221	ENST00000543545	HECTD4	Q9Y4D8	3996 aa		6.53	□□□□□ -1.36
CPSF7-221	ENST00000543545	EPPK1	P58107	5090 aa	Known RBP	6.52	□□□□□ -1.36
CPSF7-221	ENST00000543545	PKD1	P98161	4303 aa		6.52	□□□□□ -1.37
CPSF7-221	ENST00000543545	IGKV2D-26	A0A0A0MRZ7	120 aa		6.52	□□□□□ -1.37
CPSF7-221	ENST00000543545		A0A0U1RRA0	63 aa		6.52	□□□□□ -1.37
CPSF7-221	ENST00000543545	NDUFC2-KCTD14	E9PQ53	114 aa		6.52	□□□□□ -1.37
CPSF7-221	ENST00000543545	CHTF8	P0CG12	524 aa		6.52	□□□□□ -1.37
CPSF7-221	ENST00000543545	LINC00158	P58513	81 aa		6.52	□□□□□ -1.37
CPSF7-221	ENST00000543545	ERG28	Q9UKR5	140 aa		6.52	□□□□□ -1.37
CPSF7-221	ENST00000543545		A0A096LNI7	61 aa		6.51	□□□□□ -1.37
CPSF7-221	ENST00000543545	ZNF815P	A8K554	130 aa		6.51	□□□□□ -1.37
CPSF7-221	ENST00000543545	LINC00587	B1AMM8	73 aa		6.51	□□□□□ -1.37
CPSF7-221	ENST00000543545	PTTG1IP	P53801	180 aa		6.51	□□□□□ -1.37
CPSF7-221	ENST00000543545		Q6ZRP5	223 aa		6.51	□□□□□ -1.37
CPSF7-221	ENST00000543545	LINC00474	Q9P2X8	69 aa		6.51	□□□□□ -1.37
CPSF7-221	ENST00000543545	LRP1B	Q9NZR2	4599 aa		6.51	□□□□□ -1.37
CPSF7-221	ENST00000543545	TLX1NB	P0CAT3	122 aa		6.5	□□□□□ -1.37
CPSF7-221	ENST00000543545	SMIM13	P0DJ93	91 aa		6.5	□□□□□ -1.37
CPSF7-221	ENST00000543545	VAMP8	Q9BV40	100 aa		6.5	□□□□□ -1.37
CPSF7-221	ENST00000543545	TTTY13	Q9BZ97	58 aa		6.5	□□□□□ -1.37
CPSF7-221	ENST00000543545	FAM30A	Q9NZY2	134 aa		6.5	□□□□□ -1.37
CPSF7-221	ENST00000543545	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	6.5	□□□□□ -1.37
CPSF7-221	ENST00000543545	CIRBP	Q14011	172 aa	Known RBP	6.49	□□□□□ -1.37
CPSF7-221	ENST00000543545	COX17	Q14061	63 aa		6.49	□□□□□ -1.37
CPSF7-221	ENST00000543545	PYY3	Q5JQD4	70 aa		6.49	□□□□□ -1.37
CPSF7-221	ENST00000543545	PCP2	Q8IVA1	136 aa		6.49	□□□□□ -1.37
CPSF7-221	ENST00000543545	XAGE1A	Q9HD64	81 aa		6.49	□□□□□ -1.37
CPSF7-221	ENST00000543545	PAM16	Q9Y3D7	125 aa		6.49	□□□□□ -1.37
CPSF7-221	ENST00000543545	BIRC6	Q9NR09	4857 aa		6.49	□□□□□ -1.37
CPSF7-221	ENST00000543545	PKHD1	P08F94	4074 aa		6.49	□□□□□ -1.37
CPSF7-221	ENST00000543545	PANO1	I0J062	215 aa		6.48	□□□□□ -1.37
CPSF7-221	ENST00000543545	HAMP	P81172	84 aa		6.48	□□□□□ -1.37
CPSF7-221	ENST00000543545	SPATA45	Q537H7	98 aa		6.48	□□□□□ -1.37
CPSF7-221	ENST00000543545	SCGB1D4	Q6XE38	83 aa		6.48	□□□□□ -1.37
CPSF7-221	ENST00000543545		A0A0J9YXY3	114 aa		6.47	□□□□□ -1.37
CPSF7-221	ENST00000543545	MIR7-3HG	Q8N6C7	128 aa		6.47	□□□□□ -1.37
CPSF7-221	ENST00000543545	SPACA4	Q8TDM5	124 aa		6.47	□□□□□ -1.37
CPSF7-221	ENST00000543545		A0A087WYN8	130 aa		6.46	□□□□□ -1.38
CPSF7-221	ENST00000543545	S100A12	P80511	92 aa		6.46	□□□□□ -1.38
CPSF7-221	ENST00000543545		Q6ZSA8	131 aa		6.46	□□□□□ -1.38
CPSF7-221	ENST00000543545	SND1-IT1	Q9HBX3	110 aa		6.46	□□□□□ -1.38
CPSF7-221	ENST00000543545	DNAH8	Q96JB1	4490 aa		6.46	□□□□□ -1.38
CPSF7-221	ENST00000543545	C9orf129	Q5T035	196 aa	Known RBP	6.45	□□□□□ -1.38
CPSF7-221	ENST00000543545	SCX	Q7RTU7	201 aa		6.45	□□□□□ -1.38
CPSF7-221	ENST00000543545	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	6.45	□□□□□ -1.38
CPSF7-221	ENST00000543545	DAND5	Q8N907	189 aa		6.45	□□□□□ -1.38
CPSF7-221	ENST00000543545	CIRBP-AS1	Q8TBR5	109 aa		6.45	□□□□□ -1.38
CPSF7-221	ENST00000543545	C14orf144	Q96I85	54 aa		6.45	□□□□□ -1.38
CPSF7-221	ENST00000543545	LOC105371267	A0A1B0GV96	52 aa		6.44	□□□□□ -1.38
CPSF7-221	ENST00000543545		A0A1W2PNN7	141 aa		6.44	□□□□□ -1.38
CPSF7-221	ENST00000543545	FAM168B	A1KXE4	195 aa		6.44	□□□□□ -1.38
CPSF7-221	ENST00000543545	COX8A	P10176	69 aa		6.44	□□□□□ -1.38
CPSF7-221	ENST00000543545	XG	P55808	180 aa		6.44	□□□□□ -1.38
CPSF7-221	ENST00000543545	MIEN1	Q9BRT3	115 aa		6.44	□□□□□ -1.38
CPSF7-221	ENST00000543545	TMEM238	C9JI98	176 aa		6.43	□□□□□ -1.38
CPSF7-221	ENST00000543545	TIMM17B	O60830	172 aa		6.43	□□□□□ -1.38
CPSF7-221	ENST00000543545	CDK2AP2	O75956	126 aa		6.43	□□□□□ -1.38

Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms