RNA–Protein interactions for RNA: ENST00000543445.5

LDHA-221, Transcript of lactate dehydrogenase A, humanhuman

TSL 3

Gene LDHA, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-221ENST00000543445 SCO1O75880 301 aa3.59□□□□□ -1.83
LDHA-221ENST00000543445 NTF3P20783 257 aa3.59□□□□□ -1.83
LDHA-221ENST00000543445 RNASE13Q5GAN3 156 aaKnown RBP3.59□□□□□ -1.83
LDHA-221ENST00000543445 LYZL1Q6UWQ5 148 aa3.59□□□□□ -1.83
LDHA-221ENST00000543445 GATD1Q8NB37 220 aa3.59□□□□□ -1.83
LDHA-221ENST00000543445 ORAOV1Q8WV07 137 aa3.59□□□□□ -1.83
LDHA-221ENST00000543445 DPH3Q96FX2 82 aa3.59□□□□□ -1.83
LDHA-221ENST00000543445 GNG13Q9P2W3 67 aa3.59□□□□□ -1.83
LDHA-221ENST00000543445 GVQW2A0A096LPI5 108 aaPredicted RBP3.58□□□□□ -1.84
LDHA-221ENST00000543445 IGKV3OR2-268A0A0C4DH90 116 aa3.58□□□□□ -1.84
LDHA-221ENST00000543445 LOC389332A0A1B0GUA5 103 aa3.58□□□□□ -1.84
LDHA-221ENST00000543445 HMSDA8MTL9 139 aa3.58□□□□□ -1.84
LDHA-221ENST00000543445 F2Z2F3 143 aa3.58□□□□□ -1.84
LDHA-221ENST00000543445 SULT1A2P50226 295 aa3.58□□□□□ -1.84
LDHA-221ENST00000543445 FOXA3P55318 350 aaPredicted RBP3.58□□□□□ -1.84
LDHA-221ENST00000543445 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
LDHA-221ENST00000543445 C9orf62Q8N4C0 152 aa3.58□□□□□ -1.84
LDHA-221ENST00000543445 LINC00526Q96FQ7 95 aa3.58□□□□□ -1.84
LDHA-221ENST00000543445 CNFNQ9BYD5 112 aa3.58□□□□□ -1.84
LDHA-221ENST00000543445 DPH3P1Q9H4G8 78 aa3.58□□□□□ -1.84
LDHA-221ENST00000543445 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.57□□□□□ -1.84
LDHA-221ENST00000543445 TRAV1-1A0A0B4J248 108 aa3.57□□□□□ -1.84
LDHA-221ENST00000543445 A0A1B0GXF2 115 aa3.57□□□□□ -1.84
LDHA-221ENST00000543445 IGKV2-29A2NJV5 120 aaPredicted RBP3.57□□□□□ -1.84
LDHA-221ENST00000543445 UBE2L6O14933 153 aa3.57□□□□□ -1.84
LDHA-221ENST00000543445 GNG4P50150 75 aa3.57□□□□□ -1.84
LDHA-221ENST00000543445 RPS20P60866 119 aaKnown RBP3.57□□□□□ -1.84
LDHA-221ENST00000543445 FAM231DQ6ZW35 169 aa3.57□□□□□ -1.84
LDHA-221ENST00000543445 LINC00337Q8N6G1 96 aa3.57□□□□□ -1.84
LDHA-221ENST00000543445 RPL39LQ96EH5 51 aaKnown RBP3.57□□□□□ -1.84
LDHA-221ENST00000543445 SMIM12Q96EX1 92 aa3.57□□□□□ -1.84
LDHA-221ENST00000543445 MANBALQ9NQG1 85 aa3.57□□□□□ -1.84
LDHA-221ENST00000543445 IGLV4-69A0A075B6H9 119 aa3.56□□□□□ -1.84
LDHA-221ENST00000543445 KANTRA0A1W2PQU2 76 aa3.56□□□□□ -1.84
LDHA-221ENST00000543445 IFNA1P01562 189 aa3.56□□□□□ -1.84
LDHA-221ENST00000543445 TRGC1P0CF51 173 aa3.56□□□□□ -1.84
LDHA-221ENST00000543445 FGF6P10767 208 aa3.56□□□□□ -1.84
LDHA-221ENST00000543445 MEF2BQ02080 365 aaPredicted RBP3.56□□□□□ -1.84
LDHA-221ENST00000543445 RGS21Q2M5E4 152 aa3.56□□□□□ -1.84
LDHA-221ENST00000543445 SPINK6Q6UWN8 80 aa3.56□□□□□ -1.84
LDHA-221ENST00000543445 CBY1Q9Y3M2 126 aa3.56□□□□□ -1.84
LDHA-221ENST00000543445 LINC00959A0A1B0GUT2 108 aa3.55□□□□□ -1.84
LDHA-221ENST00000543445 SDHAF1A6NFY7 115 aa3.55□□□□□ -1.84
LDHA-221ENST00000543445 CCL25O15444 150 aa3.55□□□□□ -1.84
LDHA-221ENST00000543445 PDE6DO43924 150 aa3.55□□□□□ -1.84
LDHA-221ENST00000543445 NCR2O95944 276 aa3.55□□□□□ -1.84
LDHA-221ENST00000543445 ESDP10768 282 aa3.55□□□□□ -1.84
LDHA-221ENST00000543445 XCL1P47992 114 aa3.55□□□□□ -1.84
LDHA-221ENST00000543445 AMMECR1LQ6DCA0 310 aa3.55□□□□□ -1.84
LDHA-221ENST00000543445 ORMDL3Q8N138 153 aa3.55□□□□□ -1.84
LDHA-221ENST00000543445 OR5A1Q8NGJ0 315 aa3.55□□□□□ -1.84
LDHA-221ENST00000543445 RNASE7Q9H1E1 156 aaKnown RBP3.55□□□□□ -1.84
LDHA-221ENST00000543445 SPANXB1Q9NS25 103 aaPredicted RBP3.55□□□□□ -1.84
LDHA-221ENST00000543445 MED9Q9NWA0 146 aa3.55□□□□□ -1.84
LDHA-221ENST00000543445 LPAP08519 4548 aa3.54□□□□□ -1.84
LDHA-221ENST00000543445 TRBV6-5A0A0K0K1A5 114 aa3.54□□□□□ -1.84
LDHA-221ENST00000543445 A0A1W2PNN7 141 aa3.54□□□□□ -1.84
LDHA-221ENST00000543445 BCL2P10415 239 aa3.54□□□□□ -1.84
LDHA-221ENST00000543445 LINC00474Q9P2X8 69 aa3.54□□□□□ -1.84
LDHA-221ENST00000543445 IGHV1-58A0A0C4DH39 117 aa3.53□□□□□ -1.84
LDHA-221ENST00000543445 A8MWL6 223 aa3.53□□□□□ -1.84
LDHA-221ENST00000543445 C9JQL5 133 aa3.53□□□□□ -1.84
LDHA-221ENST00000543445 I3L3M4 83 aa3.53□□□□□ -1.84
LDHA-221ENST00000543445 ZNF25P17030 456 aaPredicted RBP3.53□□□□□ -1.84
LDHA-221ENST00000543445 EIF5AP63241 154 aaKnown RBP3.53□□□□□ -1.84
LDHA-221ENST00000543445 PDZD11Q5EBL8 140 aa3.53□□□□□ -1.84
LDHA-221ENST00000543445 CARD19Q96LW7 228 aa3.53□□□□□ -1.84
LDHA-221ENST00000543445 ANAPC13Q9BS18 74 aa3.53□□□□□ -1.84
LDHA-221ENST00000543445 CDC42SE2Q9NRR3 84 aa3.53□□□□□ -1.84
LDHA-221ENST00000543445 TMEM242Q9NWH2 141 aa3.53□□□□□ -1.84
LDHA-221ENST00000543445 KRTAP1-4P0C5Y4 121 aa3.52□□□□□ -1.85
LDHA-221ENST00000543445 POLR2KP53803 58 aaKnown RBP3.52□□□□□ -1.85
LDHA-221ENST00000543445 KRTAP11-1Q8IUC1 163 aa3.52□□□□□ -1.85
LDHA-221ENST00000543445 YPEL4Q96NS1 127 aa3.52□□□□□ -1.85
LDHA-221ENST00000543445 BIN3Q9NQY0 253 aa3.52□□□□□ -1.85
LDHA-221ENST00000543445 RBM12B-AS1Q9P1G2 102 aa3.52□□□□□ -1.85
LDHA-221ENST00000543445 PSORS1C2Q9UIG4 136 aa3.52□□□□□ -1.85
LDHA-221ENST00000543445 TRBV27A0A0K0K1C4 114 aa3.51□□□□□ -1.85
LDHA-221ENST00000543445 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.51□□□□□ -1.85
LDHA-221ENST00000543445 SCGB1C2P0DMR2 95 aa3.51□□□□□ -1.85
LDHA-221ENST00000543445 LUZP6Q538Z0 58 aa3.51□□□□□ -1.85
LDHA-221ENST00000543445 C9orf116Q5BN46 136 aaPredicted RBP3.51□□□□□ -1.85
LDHA-221ENST00000543445 TEX261Q6UWH6 196 aa3.51□□□□□ -1.85
LDHA-221ENST00000543445 FA2HQ7L5A8 372 aa3.51□□□□□ -1.85
LDHA-221ENST00000543445 ZNF664Q8N3J9 261 aa3.51□□□□□ -1.85
LDHA-221ENST00000543445 NUP35Q8NFH5 326 aa3.51□□□□□ -1.85
LDHA-221ENST00000543445 BTF3L4Q96K17 158 aa3.51□□□□□ -1.85
LDHA-221ENST00000543445 LOC107984640A0A0U1RRK4 108 aa3.5□□□□□ -1.85
LDHA-221ENST00000543445 C7orf77A4D0Y5 90 aa3.5□□□□□ -1.85
LDHA-221ENST00000543445 APOMO95445 188 aa3.5□□□□□ -1.85
LDHA-221ENST00000543445 SS18Q15532 418 aa3.5□□□□□ -1.85
LDHA-221ENST00000543445 EIF5AL1Q6IS14 154 aaKnown RBP3.5□□□□□ -1.85
LDHA-221ENST00000543445 PHF5AQ7RTV0 110 aaKnown RBP3.5□□□□□ -1.85
LDHA-221ENST00000543445 SMIM15Q7Z3B0 74 aa3.5□□□□□ -1.85
LDHA-221ENST00000543445 AMN1Q8IY45 258 aa3.5□□□□□ -1.85
LDHA-221ENST00000543445 TMEM191AQ9H0A3 160 aa3.5□□□□□ -1.85
LDHA-221ENST00000543445 ST20Q9HBF5 79 aa3.5□□□□□ -1.85
LDHA-221ENST00000543445 UBE2D4Q9Y2X8 147 aa3.5□□□□□ -1.85
LDHA-221ENST00000543445 HIGD1CA8MV81 97 aa3.49□□□□□ -1.85
LDHA-221ENST00000543445 COX7A2LO14548 114 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms