RNA–Protein interactions for RNA: ENST00000541897.5

MSRB3-211, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 489 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-211ENST00000541897 SYCNQ0VAF6 134 aa13.61□□□□□ -0.23
MSRB3-211ENST00000541897 C6orf226Q5I0X4 101 aa13.61□□□□□ -0.23
MSRB3-211ENST00000541897 LINC00526Q96FQ7 95 aa13.61□□□□□ -0.23
MSRB3-211ENST00000541897 CAMK2N2Q96S95 79 aa13.61□□□□□ -0.23
MSRB3-211ENST00000541897 COX7B2Q8TF08 81 aa13.6□□□□□ -0.23
MSRB3-211ENST00000541897 CARD19Q96LW7 228 aa13.6□□□□□ -0.23
MSRB3-211ENST00000541897 NDUFA1O15239 70 aa13.59□□□□□ -0.23
MSRB3-211ENST00000541897 RNF151Q2KHN1 245 aa13.59□□□□□ -0.23
MSRB3-211ENST00000541897 TOMM7Q9P0U1 55 aa13.59□□□□□ -0.23
MSRB3-211ENST00000541897 C16orf90A8MZG2 172 aa13.58□□□□□ -0.24
MSRB3-211ENST00000541897 GCSHP23434 173 aa13.58□□□□□ -0.24
MSRB3-211ENST00000541897 FUSP35637 526 aaKnown RBP eCLIP13.57□□□□□ -0.24
MSRB3-211ENST00000541897 CKS1BP61024 79 aa13.57□□□□□ -0.24
MSRB3-211ENST00000541897 HERVK_113P61574 105 aa13.57□□□□□ -0.24
MSRB3-211ENST00000541897 Q6ZRU5 148 aa13.57□□□□□ -0.24
MSRB3-211ENST00000541897 PKIGQ9Y2B9 76 aa13.57□□□□□ -0.24
MSRB3-211ENST00000541897 TRBV30A0A0K0K1B3 111 aa13.56□□□□□ -0.24
MSRB3-211ENST00000541897 SFTA2Q6UW10 78 aa13.56□□□□□ -0.24
MSRB3-211ENST00000541897 C2orf82Q6UX34 121 aa13.54□□□□□ -0.24
MSRB3-211ENST00000541897 UNQ6190/PRO20217Q6UXQ8 127 aa13.54□□□□□ -0.24
MSRB3-211ENST00000541897 DNAH5Q8TE73 4624 aa13.53□□□□□ -0.24
MSRB3-211ENST00000541897 C10orf25Q5T742 122 aa13.53□□□□□ -0.24
MSRB3-211ENST00000541897 LEPROTO15243 131 aa13.52□□□□□ -0.25
MSRB3-211ENST00000541897 SDIM1Q6ZPB5 146 aa13.52□□□□□ -0.25
MSRB3-211ENST00000541897 PLEKHB2Q96CS7 222 aa13.52□□□□□ -0.25
MSRB3-211ENST00000541897 C6orf48Q9UBA6 75 aa13.52□□□□□ -0.25
MSRB3-211ENST00000541897 APOBP04114 4563 aaKnown RBP13.52□□□□□ -0.25
MSRB3-211ENST00000541897 E9PLD3 99 aa13.51□□□□□ -0.25
MSRB3-211ENST00000541897 CDK2AP2O75956 126 aa13.5□□□□□ -0.25
MSRB3-211ENST00000541897 KRTAP10-1P60331 282 aa13.5□□□□□ -0.25
MSRB3-211ENST00000541897 TLX1NBP0CAT3 122 aa13.49□□□□□ -0.25
MSRB3-211ENST00000541897 LINC01620Q4KN68 170 aa13.49□□□□□ -0.25
MSRB3-211ENST00000541897 ZNF625Q96I27 306 aaPredicted RBP13.49□□□□□ -0.25
MSRB3-211ENST00000541897 LOC107984640A0A0U1RRK4 108 aa13.48□□□□□ -0.25
MSRB3-211ENST00000541897 J3QQQ9 107 aa13.47□□□□□ -0.25
MSRB3-211ENST00000541897 NMUP48645 174 aa13.47□□□□□ -0.25
MSRB3-211ENST00000541897 Q6ZSA8 131 aa13.47□□□□□ -0.25
MSRB3-211ENST00000541897 STPG4Q8N801 248 aa13.47□□□□□ -0.25
MSRB3-211ENST00000541897 SCGB1D1O95968 90 aa13.45□□□□□ -0.26
MSRB3-211ENST00000541897 HERV-K104P63124 156 aa13.45□□□□□ -0.26
MSRB3-211ENST00000541897 JOSD1Q15040 202 aaPredicted RBP13.45□□□□□ -0.26
MSRB3-211ENST00000541897 ATOH7Q8N100 152 aa13.45□□□□□ -0.26
MSRB3-211ENST00000541897 NDUFC2-KCTD14E9PQ53 114 aa13.44□□□□□ -0.26
MSRB3-211ENST00000541897 TSPEAR-AS2P59090 65 aa13.44□□□□□ -0.26
MSRB3-211ENST00000541897 CIRBPQ14011 172 aaKnown RBP13.44□□□□□ -0.26
MSRB3-211ENST00000541897 LINC00474Q9P2X8 69 aa13.44□□□□□ -0.26
MSRB3-211ENST00000541897 NDUFA12Q9UI09 145 aa13.44□□□□□ -0.26
MSRB3-211ENST00000541897 MYMXA0A1B0GTQ4 84 aa13.43□□□□□ -0.26
MSRB3-211ENST00000541897 LGALS3P17931 250 aaKnown RBP13.43□□□□□ -0.26
MSRB3-211ENST00000541897 COX17Q14061 63 aa13.42□□□□□ -0.26
MSRB3-211ENST00000541897 C9orf116Q5BN46 136 aaPredicted RBP13.42□□□□□ -0.26
MSRB3-211ENST00000541897 PTTG1IPP53801 180 aa13.41□□□□□ -0.26
MSRB3-211ENST00000541897 A0A096LNI7 61 aa13.4□□□□□ -0.26
MSRB3-211ENST00000541897 LINC00587B1AMM8 73 aa13.4□□□□□ -0.26
MSRB3-211ENST00000541897 HSBP1L1C9JCN9 74 aa13.4□□□□□ -0.26
MSRB3-211ENST00000541897 Q6ZRP5 223 aa13.4□□□□□ -0.26
MSRB3-211ENST00000541897 Q8N1X5 172 aa13.4□□□□□ -0.26
MSRB3-211ENST00000541897 FAM30AQ9NZY2 134 aa13.4□□□□□ -0.26
MSRB3-211ENST00000541897 IGKV2D-26A0A0A0MRZ7 120 aa13.39□□□□□ -0.27
MSRB3-211ENST00000541897 RPL18AQ02543 176 aaKnown RBP13.39□□□□□ -0.27
MSRB3-211ENST00000541897 ANKRD39Q53RE8 183 aa13.39□□□□□ -0.27
MSRB3-211ENST00000541897 SPACA4Q8TDM5 124 aa13.39□□□□□ -0.27
MSRB3-211ENST00000541897 ERG28Q9UKR5 140 aa13.39□□□□□ -0.27
MSRB3-211ENST00000541897 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.38□□□□□ -0.27
MSRB3-211ENST00000541897 GAGE2BQ13066 116 aa13.37□□□□□ -0.27
MSRB3-211ENST00000541897 IGKV2-24A0A0C4DH68 120 aa13.35□□□□□ -0.27
MSRB3-211ENST00000541897 PANO1I0J062 215 aa13.35□□□□□ -0.27
MSRB3-211ENST00000541897 CHTF8P0CG12 524 aa13.35□□□□□ -0.27
MSRB3-211ENST00000541897 MAJINQ3KP22 176 aa13.35□□□□□ -0.27
MSRB3-211ENST00000541897 DNAH8Q96JB1 4490 aa13.35□□□□□ -0.27
MSRB3-211ENST00000541897 PFN2P35080 140 aa13.34□□□□□ -0.27
MSRB3-211ENST00000541897 PYY3Q5JQD4 70 aa13.34□□□□□ -0.27
MSRB3-211ENST00000541897 GAGE2EQ4V326 116 aa13.33□□□□□ -0.28
MSRB3-211ENST00000541897 GAGE2DQ9UEU5 116 aa13.33□□□□□ -0.28
MSRB3-211ENST00000541897 ZNF815PA8K554 130 aa13.32□□□□□ -0.28
MSRB3-211ENST00000541897 EPM2AB3EWF7 344 aa13.32□□□□□ -0.28
MSRB3-211ENST00000541897 XGP55808 180 aa13.32□□□□□ -0.28
MSRB3-211ENST00000541897 MEIG1Q5JSS6 88 aa13.32□□□□□ -0.28
MSRB3-211ENST00000541897 A0A0J9YXY3 114 aa13.31□□□□□ -0.28
MSRB3-211ENST00000541897 PLAC8Q9NZF1 115 aa13.31□□□□□ -0.28
MSRB3-211ENST00000541897 A0A087WYN8 130 aa13.3□□□□□ -0.28
MSRB3-211ENST00000541897 SMIM13P0DJ93 91 aa13.3□□□□□ -0.28
MSRB3-211ENST00000541897 LINC00158P58513 81 aa13.3□□□□□ -0.28
MSRB3-211ENST00000541897 SCXQ7RTU7 201 aa13.3□□□□□ -0.28
MSRB3-211ENST00000541897 CIRBP-AS1Q8TBR5 109 aa13.3□□□□□ -0.28
MSRB3-211ENST00000541897 DPH3Q96FX2 82 aa13.3□□□□□ -0.28
MSRB3-211ENST00000541897 TIMM17BO60830 172 aa13.29□□□□□ -0.28
MSRB3-211ENST00000541897 C9orf129Q5T035 196 aaKnown RBP13.29□□□□□ -0.28
MSRB3-211ENST00000541897 VAMP8Q9BV40 100 aa13.29□□□□□ -0.28
MSRB3-211ENST00000541897 PCP2Q8IVA1 136 aa13.28□□□□□ -0.28
MSRB3-211ENST00000541897 TTTY13Q9BZ97 58 aa13.28□□□□□ -0.28
MSRB3-211ENST00000541897 SND1-IT1Q9HBX3 110 aa13.27□□□□□ -0.29
MSRB3-211ENST00000541897 XAGE1AQ9HD64 81 aa13.27□□□□□ -0.29
MSRB3-211ENST00000541897 PLA2G2DQ9UNK4 145 aa13.26□□□□□ -0.29
MSRB3-211ENST00000541897 MIR7-3HGQ8N6C7 128 aa13.25□□□□□ -0.29
MSRB3-211ENST00000541897 HERC1Q15751 4861 aa13.24□□□□□ -0.29
MSRB3-211ENST00000541897 FAT1Q14517 4588 aa13.24□□□□□ -0.29
MSRB3-211ENST00000541897 A0A1W2PNN7 141 aa13.24□□□□□ -0.29
MSRB3-211ENST00000541897 SPATA45Q537H7 98 aa13.24□□□□□ -0.29
MSRB3-211ENST00000541897 PAM16Q9Y3D7 125 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms