RNA–Protein interactions for RNA: ENST00000541359.1

LINC00943-207, long intergenic non-protein coding RNA 943, humanhuman

TSL 4

Gene LINC00943, Length 676 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-207ENST00000541359 HIST1H2BJP06899 126 aa13.53□□□□□ -0.24
LINC00943-207ENST00000541359 ZNF22P17026 224 aaPredicted RBP13.53□□□□□ -0.24
LINC00943-207ENST00000541359 HIST1H2BOP23527 126 aa13.53□□□□□ -0.24
LINC00943-207ENST00000541359 HIST1H2BBP33778 126 aa13.53□□□□□ -0.24
LINC00943-207ENST00000541359 HIST1H2BDP58876 126 aa13.53□□□□□ -0.24
LINC00943-207ENST00000541359 HIST1H2BCP62807 126 aa13.53□□□□□ -0.24
LINC00943-207ENST00000541359 HIST2H2BEQ16778 126 aa13.53□□□□□ -0.24
LINC00943-207ENST00000541359 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.53□□□□□ -0.24
LINC00943-207ENST00000541359 HIST1H2BHQ93079 126 aa13.53□□□□□ -0.24
LINC00943-207ENST00000541359 HIST1H2BNQ99877 126 aa13.53□□□□□ -0.24
LINC00943-207ENST00000541359 HIST1H2BMQ99879 126 aa13.53□□□□□ -0.24
LINC00943-207ENST00000541359 TOMM7Q9P0U1 55 aa13.53□□□□□ -0.24
LINC00943-207ENST00000541359 TRBV30A0A0K0K1B3 111 aa13.52□□□□□ -0.25
LINC00943-207ENST00000541359 ATP6V1G1O75348 118 aa13.52□□□□□ -0.25
LINC00943-207ENST00000541359 SPINK8P0C7L1 97 aa13.52□□□□□ -0.25
LINC00943-207ENST00000541359 TLX1NBP0CAT3 122 aa13.52□□□□□ -0.25
LINC00943-207ENST00000541359 GAGE2BQ13066 116 aa13.52□□□□□ -0.25
LINC00943-207ENST00000541359 LINC00474Q9P2X8 69 aa13.52□□□□□ -0.25
LINC00943-207ENST00000541359 TRAV12-1A0A0B4J245 112 aa13.51□□□□□ -0.25
LINC00943-207ENST00000541359 C11orf86A6NJI1 115 aa13.51□□□□□ -0.25
LINC00943-207ENST00000541359 PRSS2P07478 247 aa13.51□□□□□ -0.25
LINC00943-207ENST00000541359 STPG4Q8N801 248 aa13.51□□□□□ -0.25
LINC00943-207ENST00000541359 C6orf226Q5I0X4 101 aa13.5□□□□□ -0.25
LINC00943-207ENST00000541359 DPH3Q96FX2 82 aa13.5□□□□□ -0.25
LINC00943-207ENST00000541359 SRRM2Q9UQ35 2752 aaKnown RBP13.5□□□□□ -0.25
LINC00943-207ENST00000541359 IGLV5-39A0A0G2JS06 123 aa13.49□□□□□ -0.25
LINC00943-207ENST00000541359 S100A1P23297 94 aa13.49□□□□□ -0.25
LINC00943-207ENST00000541359 RPL18AQ02543 176 aaKnown RBP13.49□□□□□ -0.25
LINC00943-207ENST00000541359 C9orf116Q5BN46 136 aaPredicted RBP13.49□□□□□ -0.25
LINC00943-207ENST00000541359 Q6ZRP5 223 aa13.49□□□□□ -0.25
LINC00943-207ENST00000541359 CHTOPQ9Y3Y2 248 aaKnown RBP13.49□□□□□ -0.25
LINC00943-207ENST00000541359 H3BRM9 83 aa13.48□□□□□ -0.25
LINC00943-207ENST00000541359 COX7B2Q8TF08 81 aa13.48□□□□□ -0.25
LINC00943-207ENST00000541359 LEPROTL1O95214 131 aa13.47□□□□□ -0.25
LINC00943-207ENST00000541359 PLA2G1BP04054 148 aaKnown RBP13.47□□□□□ -0.25
LINC00943-207ENST00000541359 CKS1BP61024 79 aa13.47□□□□□ -0.25
LINC00943-207ENST00000541359 A0A1W2PNN7 141 aa13.46□□□□□ -0.25
LINC00943-207ENST00000541359 F8VRH5 84 aa13.45□□□□□ -0.26
LINC00943-207ENST00000541359 CXCL5P42830 114 aa13.45□□□□□ -0.26
LINC00943-207ENST00000541359 NDUFC2-KCTD14E9PQ53 114 aa13.44□□□□□ -0.26
LINC00943-207ENST00000541359 INAFM2P0DMQ5 153 aa13.44□□□□□ -0.26
LINC00943-207ENST00000541359 ODF1Q14990 250 aa13.44□□□□□ -0.26
LINC00943-207ENST00000541359 RPL37AP61513 92 aaKnown RBP13.43□□□□□ -0.26
LINC00943-207ENST00000541359 FABP4P15090 132 aa13.42□□□□□ -0.26
LINC00943-207ENST00000541359 TMEM170BQ5T4T1 132 aa13.42□□□□□ -0.26
LINC00943-207ENST00000541359 HSPB8Q9UJY1 196 aa13.42□□□□□ -0.26
LINC00943-207ENST00000541359 GAGE2EQ4V326 116 aa13.41□□□□□ -0.26
LINC00943-207ENST00000541359 GAGE2DQ9UEU5 116 aa13.41□□□□□ -0.26
LINC00943-207ENST00000541359 PKHD1L1Q86WI1 4243 aa13.4□□□□□ -0.26
LINC00943-207ENST00000541359 TMEM223A0PJW6 202 aa13.4□□□□□ -0.26
LINC00943-207ENST00000541359 COA6Q5JTJ3 125 aaKnown RBP13.4□□□□□ -0.26
LINC00943-207ENST00000541359 C9orf129Q5T035 196 aaKnown RBP13.4□□□□□ -0.26
LINC00943-207ENST00000541359 KRTAP7-1Q8IUC3 87 aa13.4□□□□□ -0.26
LINC00943-207ENST00000541359 FAM168BA1KXE4 195 aa13.39□□□□□ -0.27
LINC00943-207ENST00000541359 H0Y8G0 127 aa13.38□□□□□ -0.27
LINC00943-207ENST00000541359 HNRNPA3P51991 378 aaKnown RBP13.37□□□□□ -0.27
LINC00943-207ENST00000541359 C7orf33Q8WU49 177 aa13.37□□□□□ -0.27
LINC00943-207ENST00000541359 MYCBP2O75592 4640 aa13.37□□□□□ -0.27
LINC00943-207ENST00000541359 FLG2Q5D862 2391 aaPredicted RBP13.35□□□□□ -0.27
LINC00943-207ENST00000541359 ZNF625Q96I27 306 aaPredicted RBP13.34□□□□□ -0.27
LINC00943-207ENST00000541359 PHF5AQ7RTV0 110 aaKnown RBP13.33□□□□□ -0.28
LINC00943-207ENST00000541359 PMCHL2Q9BQD1 86 aa13.33□□□□□ -0.28
LINC00943-207ENST00000541359 PRR3P79522 188 aaKnown RBP13.32□□□□□ -0.28
LINC00943-207ENST00000541359 FAM19A5Q7Z5A7 132 aaPredicted RBP13.32□□□□□ -0.28
LINC00943-207ENST00000541359 MAP1LC3CQ9BXW4 147 aa13.32□□□□□ -0.28
LINC00943-207ENST00000541359 XAGE1AQ9HD64 81 aa13.32□□□□□ -0.28
LINC00943-207ENST00000541359 PLNP26678 52 aa13.31□□□□□ -0.28
LINC00943-207ENST00000541359 DPM2O94777 84 aa13.3□□□□□ -0.28
LINC00943-207ENST00000541359 SYS1-DBNDD2H3BUS1 97 aa13.29□□□□□ -0.28
LINC00943-207ENST00000541359 SERTAD4-AS1Q5TG53 156 aa13.29□□□□□ -0.28
LINC00943-207ENST00000541359 KRTAP11-1Q8IUC1 163 aa13.29□□□□□ -0.28
LINC00943-207ENST00000541359 ERG28Q9UKR5 140 aa13.28□□□□□ -0.28
LINC00943-207ENST00000541359 IGKCP01834 107 aa13.27□□□□□ -0.29
LINC00943-207ENST00000541359 SFTA2Q6UW10 78 aa13.27□□□□□ -0.29
LINC00943-207ENST00000541359 LRP1Q07954 4544 aaKnown RBP13.27□□□□□ -0.29
LINC00943-207ENST00000541359 FAT3Q8TDW7 4589 aa13.27□□□□□ -0.29
LINC00943-207ENST00000541359 M0QXV9 152 aa13.26□□□□□ -0.29
LINC00943-207ENST00000541359 TSPEAR-AS2P59090 65 aa13.26□□□□□ -0.29
LINC00943-207ENST00000541359 PFN2P35080 140 aa13.25□□□□□ -0.29
LINC00943-207ENST00000541359 C3orf79P0CE67 100 aa13.24□□□□□ -0.29
LINC00943-207ENST00000541359 LINC01545Q5VT33 79 aa13.24□□□□□ -0.29
LINC00943-207ENST00000541359 PSORS1C2Q9UIG4 136 aa13.24□□□□□ -0.29
LINC00943-207ENST00000541359 COX17Q14061 63 aa13.23□□□□□ -0.29
LINC00943-207ENST00000541359 PLA2G2DQ9UNK4 145 aa13.23□□□□□ -0.29
LINC00943-207ENST00000541359 LEPROTO15243 131 aa13.22□□□□□ -0.29
LINC00943-207ENST00000541359 PET117Q6UWS5 81 aa13.22□□□□□ -0.29
LINC00943-207ENST00000541359 C22orf24Q9Y442 160 aa13.22□□□□□ -0.29
LINC00943-207ENST00000541359 SND1-IT1Q9HBX3 110 aa13.21□□□□□ -0.29
LINC00943-207ENST00000541359 NDUFA12Q9UI09 145 aa13.2□□□□□ -0.3
LINC00943-207ENST00000541359 PLEKHB2Q96CS7 222 aa13.19□□□□□ -0.3
LINC00943-207ENST00000541359 TP73-AS1Q9UF72 201 aa13.19□□□□□ -0.3
LINC00943-207ENST00000541359 IGLV5-37A0A075B6J1 123 aa13.18□□□□□ -0.3
LINC00943-207ENST00000541359 KRTAP29-1A8MX34 341 aaPredicted RBP13.18□□□□□ -0.3
LINC00943-207ENST00000541359 J3QQQ9 107 aa13.18□□□□□ -0.3
LINC00943-207ENST00000541359 HERVK_113P61574 105 aa13.18□□□□□ -0.3
LINC00943-207ENST00000541359 SRSF9Q13242 221 aaKnown RBP eCLIP13.18□□□□□ -0.3
LINC00943-207ENST00000541359 KRTDAPP60985 99 aa13.17□□□□□ -0.3
LINC00943-207ENST00000541359 HERV-K104P63124 156 aa13.17□□□□□ -0.3
LINC00943-207ENST00000541359 HIST3H2BBQ8N257 126 aa13.17□□□□□ -0.3
LINC00943-207ENST00000541359 Q8NDZ9 215 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms