RNA–Protein interactions for RNA: ENST00000541189.5

MSRB3-210, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-210ENST00000541189 HIST1H2BLQ99880 126 aa8.95□□□□□ -0.98
MSRB3-210ENST00000541189 PKIGQ9Y2B9 76 aa8.95□□□□□ -0.98
MSRB3-210ENST00000541189 CXCL5P42830 114 aa8.94□□□□□ -0.98
MSRB3-210ENST00000541189 KRTDAPP60985 99 aa8.94□□□□□ -0.98
MSRB3-210ENST00000541189 C2orf82Q6UX34 121 aa8.94□□□□□ -0.98
MSRB3-210ENST00000541189 Q6ZSA8 131 aa8.94□□□□□ -0.98
MSRB3-210ENST00000541189 PMCHL2Q9BQD1 86 aa8.94□□□□□ -0.98
MSRB3-210ENST00000541189 TRBV30A0A0K0K1B3 111 aa8.93□□□□□ -0.98
MSRB3-210ENST00000541189 CDK2AP2O75956 126 aa8.93□□□□□ -0.98
MSRB3-210ENST00000541189 FAM30AQ9NZY2 134 aa8.93□□□□□ -0.98
MSRB3-210ENST00000541189 C6orf48Q9UBA6 75 aa8.93□□□□□ -0.98
MSRB3-210ENST00000541189 PKHD1P08F94 4074 aa8.93□□□□□ -0.98
MSRB3-210ENST00000541189 LOC107984640A0A0U1RRK4 108 aa8.91□□□□□ -0.98
MSRB3-210ENST00000541189 C20orf202A1L168 122 aa8.91□□□□□ -0.98
MSRB3-210ENST00000541189 TLX1NBP0CAT3 122 aa8.9□□□□□ -0.98
MSRB3-210ENST00000541189 AKR1D1P51857 326 aa8.89□□□□□ -0.99
MSRB3-210ENST00000541189 XGP55808 180 aa8.89□□□□□ -0.99
MSRB3-210ENST00000541189 HERVK_113P61574 105 aa8.89□□□□□ -0.99
MSRB3-210ENST00000541189 CIRBPQ14011 172 aaKnown RBP8.89□□□□□ -0.99
MSRB3-210ENST00000541189 SFTA2Q6UW10 78 aa8.89□□□□□ -0.99
MSRB3-210ENST00000541189 LINC00474Q9P2X8 69 aa8.89□□□□□ -0.99
MSRB3-210ENST00000541189 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.89□□□□□ -0.99
MSRB3-210ENST00000541189 DYNC1H1Q14204 4646 aaKnown RBP8.89□□□□□ -0.99
MSRB3-210ENST00000541189 A0A096LNI7 61 aa8.88□□□□□ -0.99
MSRB3-210ENST00000541189 BIRC6Q9NR09 4857 aa8.88□□□□□ -0.99
MSRB3-210ENST00000541189 PANO1I0J062 215 aa8.87□□□□□ -0.99
MSRB3-210ENST00000541189 LEPROTO15243 131 aa8.87□□□□□ -0.99
MSRB3-210ENST00000541189 CHTF8P0CG12 524 aa8.87□□□□□ -0.99
MSRB3-210ENST00000541189 PTTG1IPP53801 180 aa8.87□□□□□ -0.99
MSRB3-210ENST00000541189 GAGE2BQ13066 116 aa8.87□□□□□ -0.99
MSRB3-210ENST00000541189 C9orf116Q5BN46 136 aaPredicted RBP8.87□□□□□ -0.99
MSRB3-210ENST00000541189 SPACA4Q8TDM5 124 aa8.87□□□□□ -0.99
MSRB3-210ENST00000541189 PLEKHB2Q96CS7 222 aa8.87□□□□□ -0.99
MSRB3-210ENST00000541189 DPH3Q96FX2 82 aa8.87□□□□□ -0.99
MSRB3-210ENST00000541189 ZNF625Q96I27 306 aaPredicted RBP8.87□□□□□ -0.99
MSRB3-210ENST00000541189 DNAH5Q8TE73 4624 aa8.86□□□□□ -0.99
MSRB3-210ENST00000541189 IGKV2-24A0A0C4DH68 120 aa8.86□□□□□ -0.99
MSRB3-210ENST00000541189 NDUFC2-KCTD14E9PQ53 114 aa8.86□□□□□ -0.99
MSRB3-210ENST00000541189 RPL18AQ02543 176 aaKnown RBP8.86□□□□□ -0.99
MSRB3-210ENST00000541189 E9PLD3 99 aa8.85□□□□□ -0.99
MSRB3-210ENST00000541189 MAJINQ3KP22 176 aa8.85□□□□□ -0.99
MSRB3-210ENST00000541189 Q6ZRP5 223 aa8.85□□□□□ -0.99
MSRB3-210ENST00000541189 SCXQ7RTU7 201 aa8.85□□□□□ -0.99
MSRB3-210ENST00000541189 CIRBP-AS1Q8TBR5 109 aa8.85□□□□□ -0.99
MSRB3-210ENST00000541189 LRP1BQ9NZR2 4599 aa8.85□□□□□ -0.99
MSRB3-210ENST00000541189 J3QQQ9 107 aa8.84□□□□□ -0.99
MSRB3-210ENST00000541189 STPG4Q8N801 248 aa8.84□□□□□ -0.99
MSRB3-210ENST00000541189 TMA7Q9Y2S6 64 aaKnown RBP8.84□□□□□ -0.99
MSRB3-210ENST00000541189 A0A087WYN8 130 aa8.83□□□□□ -1
MSRB3-210ENST00000541189 MYMXA0A1B0GTQ4 84 aa8.83□□□□□ -1
MSRB3-210ENST00000541189 TSPEAR-AS2P59090 65 aa8.83□□□□□ -1
MSRB3-210ENST00000541189 HERV-K104P63124 156 aa8.83□□□□□ -1
MSRB3-210ENST00000541189 NDUFA12Q9UI09 145 aa8.83□□□□□ -1
MSRB3-210ENST00000541189 LGALS3P17931 250 aaKnown RBP8.82□□□□□ -1
MSRB3-210ENST00000541189 NMUP48645 174 aa8.82□□□□□ -1
MSRB3-210ENST00000541189 HAMPP81172 84 aa8.82□□□□□ -1
MSRB3-210ENST00000541189 COX17Q14061 63 aa8.82□□□□□ -1
MSRB3-210ENST00000541189 GAGE2EQ4V326 116 aa8.82□□□□□ -1
MSRB3-210ENST00000541189 PLAC8Q9NZF1 115 aa8.82□□□□□ -1
MSRB3-210ENST00000541189 GAGE2DQ9UEU5 116 aa8.82□□□□□ -1
MSRB3-210ENST00000541189 ERG28Q9UKR5 140 aa8.82□□□□□ -1
MSRB3-210ENST00000541189 EPM2AB3EWF7 344 aa8.81□□□□□ -1
MSRB3-210ENST00000541189 ATOH7Q8N100 152 aa8.81□□□□□ -1
MSRB3-210ENST00000541189 LINC00587B1AMM8 73 aa8.8□□□□□ -1
MSRB3-210ENST00000541189 PFN2P35080 140 aa8.8□□□□□ -1
MSRB3-210ENST00000541189 SCGB1D1O95968 90 aa8.79□□□□□ -1
MSRB3-210ENST00000541189 KIAA1109Q2LD37 5005 aa8.78□□□□□ -1
MSRB3-210ENST00000541189 IGKV2D-26A0A0A0MRZ7 120 aa8.78□□□□□ -1
MSRB3-210ENST00000541189 A0A1W2PNN7 141 aa8.78□□□□□ -1
MSRB3-210ENST00000541189 C9orf129Q5T035 196 aaKnown RBP8.78□□□□□ -1
MSRB3-210ENST00000541189 SMR3BP02814 79 aaPredicted RBP8.77□□□□□ -1.01
MSRB3-210ENST00000541189 LINC00158P58513 81 aa8.77□□□□□ -1.01
MSRB3-210ENST00000541189 ANKRD39Q53RE8 183 aa8.77□□□□□ -1.01
MSRB3-210ENST00000541189 MEIG1Q5JSS6 88 aa8.77□□□□□ -1.01
MSRB3-210ENST00000541189 XAGE1AQ9HD64 81 aa8.77□□□□□ -1.01
MSRB3-210ENST00000541189 SMIM13P0DJ93 91 aa8.76□□□□□ -1.01
MSRB3-210ENST00000541189 Q8N1X5 172 aa8.76□□□□□ -1.01
MSRB3-210ENST00000541189 FAM168BA1KXE4 195 aa8.75□□□□□ -1.01
MSRB3-210ENST00000541189 HSBP1L1C9JCN9 74 aa8.75□□□□□ -1.01
MSRB3-210ENST00000541189 JOSD1Q15040 202 aaPredicted RBP8.75□□□□□ -1.01
MSRB3-210ENST00000541189 SND1-IT1Q9HBX3 110 aa8.75□□□□□ -1.01
MSRB3-210ENST00000541189 DNAH8Q96JB1 4490 aa8.75□□□□□ -1.01
MSRB3-210ENST00000541189 RYR1P21817 5038 aa8.74□□□□□ -1.01
MSRB3-210ENST00000541189 A0A0J9YXY3 114 aa8.74□□□□□ -1.01
MSRB3-210ENST00000541189 A0A0U1RRA0 63 aa8.74□□□□□ -1.01
MSRB3-210ENST00000541189 PLA2G2DQ9UNK4 145 aa8.74□□□□□ -1.01
MSRB3-210ENST00000541189 APOBP04114 4563 aaKnown RBP8.74□□□□□ -1.01
MSRB3-210ENST00000541189 ZNF815PA8K554 130 aa8.73□□□□□ -1.01
MSRB3-210ENST00000541189 FAM229AH3BQW9 127 aa8.73□□□□□ -1.01
MSRB3-210ENST00000541189 KRTAP7-1Q8IUC3 87 aa8.73□□□□□ -1.01
MSRB3-210ENST00000541189 LINC00528Q8N1L1 170 aa8.73□□□□□ -1.01
MSRB3-210ENST00000541189 KRTAP17-1Q9BYP8 105 aa8.73□□□□□ -1.01
MSRB3-210ENST00000541189 FAM19A5Q7Z5A7 132 aaPredicted RBP8.72□□□□□ -1.01
MSRB3-210ENST00000541189 MIR7-3HGQ8N6C7 128 aa8.72□□□□□ -1.01
MSRB3-210ENST00000541189 C7orf33Q8WU49 177 aa8.72□□□□□ -1.01
MSRB3-210ENST00000541189 TTTY13Q9BZ97 58 aa8.72□□□□□ -1.01
MSRB3-210ENST00000541189 TIMM17BO60830 172 aa8.71□□□□□ -1.02
MSRB3-210ENST00000541189 SERTAD4-AS1Q5TG53 156 aa8.71□□□□□ -1.02
MSRB3-210ENST00000541189 PCP2Q8IVA1 136 aa8.7□□□□□ -1.02
MSRB3-210ENST00000541189 TP73-AS1Q9UF72 201 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms