RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 C6orf48Q9UBA6 75 aa14.02□□□□□ -0.17
TRIM65-202ENST00000540128 EPM2AB3EWF7 344 aa14.01□□□□□ -0.17
TRIM65-202ENST00000540128 H3BRM9 83 aa14.01□□□□□ -0.17
TRIM65-202ENST00000540128 C6orf226Q5I0X4 101 aa14.01□□□□□ -0.17
TRIM65-202ENST00000540128 A0A087WYN8 130 aa14□□□□□ -0.17
TRIM65-202ENST00000540128 TRBV30A0A0K0K1B3 111 aa14□□□□□ -0.17
TRIM65-202ENST00000540128 LEPROTL1O95214 131 aa14□□□□□ -0.17
TRIM65-202ENST00000540128 TLX1NBP0CAT3 122 aa14□□□□□ -0.17
TRIM65-202ENST00000540128 ZNF22P17026 224 aaPredicted RBP14□□□□□ -0.17
TRIM65-202ENST00000540128 PTTG1IPP53801 180 aa14□□□□□ -0.17
TRIM65-202ENST00000540128 C2orf82Q6UX34 121 aa14□□□□□ -0.17
TRIM65-202ENST00000540128 DPH3Q96FX2 82 aa14□□□□□ -0.17
TRIM65-202ENST00000540128 PLAC8Q9NZF1 115 aa14□□□□□ -0.17
TRIM65-202ENST00000540128 TOMM7Q9P0U1 55 aa14□□□□□ -0.17
TRIM65-202ENST00000540128 CHTOPQ9Y3Y2 248 aaKnown RBP14□□□□□ -0.17
TRIM65-202ENST00000540128 IGKV2-24A0A0C4DH68 120 aa13.99□□□□□ -0.17
TRIM65-202ENST00000540128 C11orf86A6NJI1 115 aa13.99□□□□□ -0.17
TRIM65-202ENST00000540128 MAJINQ3KP22 176 aa13.99□□□□□ -0.17
TRIM65-202ENST00000540128 FAM229AH3BQW9 127 aa13.98□□□□□ -0.17
TRIM65-202ENST00000540128 CKS1BP61024 79 aa13.98□□□□□ -0.17
TRIM65-202ENST00000540128 Q5VSD8 79 aa13.98□□□□□ -0.17
TRIM65-202ENST00000540128 HSPB8Q9UJY1 196 aa13.98□□□□□ -0.17
TRIM65-202ENST00000540128 FAT1Q14517 4588 aa13.98□□□□□ -0.17
TRIM65-202ENST00000540128 IGLV5-39A0A0G2JS06 123 aa13.97□□□□□ -0.17
TRIM65-202ENST00000540128 SPINK8P0C7L1 97 aa13.97□□□□□ -0.17
TRIM65-202ENST00000540128 CXCL5P42830 114 aa13.97□□□□□ -0.17
TRIM65-202ENST00000540128 LINC00528Q8N1L1 170 aa13.97□□□□□ -0.17
TRIM65-202ENST00000540128 GAGE2BQ13066 116 aa13.96□□□□□ -0.17
TRIM65-202ENST00000540128 COA6Q5JTJ3 125 aaKnown RBP13.96□□□□□ -0.17
TRIM65-202ENST00000540128 COX7B2Q8TF08 81 aa13.96□□□□□ -0.17
TRIM65-202ENST00000540128 F8VRH5 84 aa13.95□□□□□ -0.18
TRIM65-202ENST00000540128 STPG4Q8N801 248 aa13.94□□□□□ -0.18
TRIM65-202ENST00000540128 FABP4P15090 132 aa13.93□□□□□ -0.18
TRIM65-202ENST00000540128 ODF1Q14990 250 aa13.93□□□□□ -0.18
TRIM65-202ENST00000540128 RPL18AQ02543 176 aaKnown RBP13.92□□□□□ -0.18
TRIM65-202ENST00000540128 TMEM170BQ5T4T1 132 aa13.92□□□□□ -0.18
TRIM65-202ENST00000540128 Q6ZRP5 223 aa13.92□□□□□ -0.18
TRIM65-202ENST00000540128 NDUFC2-KCTD14E9PQ53 114 aa13.9□□□□□ -0.18
TRIM65-202ENST00000540128 PLA2G1BP04054 148 aaKnown RBP13.9□□□□□ -0.18
TRIM65-202ENST00000540128 C9orf116Q5BN46 136 aaPredicted RBP13.9□□□□□ -0.18
TRIM65-202ENST00000540128 TMEM223A0PJW6 202 aa13.89□□□□□ -0.19
TRIM65-202ENST00000540128 VPS13BQ7Z7G8 4022 aa13.88□□□□□ -0.19
TRIM65-202ENST00000540128 KRTAP10-4P60372 401 aaPredicted RBP13.88□□□□□ -0.19
TRIM65-202ENST00000540128 A0A1W2PNN7 141 aa13.87□□□□□ -0.19
TRIM65-202ENST00000540128 MAP1LC3CQ9BXW4 147 aa13.87□□□□□ -0.19
TRIM65-202ENST00000540128 H0Y8G0 127 aa13.86□□□□□ -0.19
TRIM65-202ENST00000540128 SRRM2Q9UQ35 2752 aaKnown RBP13.86□□□□□ -0.19
TRIM65-202ENST00000540128 ABCA13Q86UQ4 5058 aa13.86□□□□□ -0.19
TRIM65-202ENST00000540128 GAGE2EQ4V326 116 aa13.85□□□□□ -0.19
TRIM65-202ENST00000540128 GAGE2DQ9UEU5 116 aa13.85□□□□□ -0.19
TRIM65-202ENST00000540128 PLNP26678 52 aa13.84□□□□□ -0.19
TRIM65-202ENST00000540128 SYS1-DBNDD2H3BUS1 97 aa13.82□□□□□ -0.2
TRIM65-202ENST00000540128 DPM2O94777 84 aa13.82□□□□□ -0.2
TRIM65-202ENST00000540128 RPL37AP61513 92 aaKnown RBP13.82□□□□□ -0.2
TRIM65-202ENST00000540128 SFTA2Q6UW10 78 aa13.82□□□□□ -0.2
TRIM65-202ENST00000540128 C7orf33Q8WU49 177 aa13.82□□□□□ -0.2
TRIM65-202ENST00000540128 INAFM2P0DMQ5 153 aa13.81□□□□□ -0.2
TRIM65-202ENST00000540128 C9orf129Q5T035 196 aaKnown RBP13.81□□□□□ -0.2
TRIM65-202ENST00000540128 ZNF625Q96I27 306 aaPredicted RBP13.81□□□□□ -0.2
TRIM65-202ENST00000540128 FAM168BA1KXE4 195 aa13.78□□□□□ -0.2
TRIM65-202ENST00000540128 IGKCP01834 107 aa13.78□□□□□ -0.2
TRIM65-202ENST00000540128 KRTAP7-1Q8IUC3 87 aa13.78□□□□□ -0.2
TRIM65-202ENST00000540128 PMCHL2Q9BQD1 86 aa13.78□□□□□ -0.2
TRIM65-202ENST00000540128 PET117Q6UWS5 81 aa13.77□□□□□ -0.21
TRIM65-202ENST00000540128 LINC01545Q5VT33 79 aa13.76□□□□□ -0.21
TRIM65-202ENST00000540128 FLG2Q5D862 2391 aaPredicted RBP13.76□□□□□ -0.21
TRIM65-202ENST00000540128 COX17Q14061 63 aa13.75□□□□□ -0.21
TRIM65-202ENST00000540128 XAGE1AQ9HD64 81 aa13.75□□□□□ -0.21
TRIM65-202ENST00000540128 ERG28Q9UKR5 140 aa13.75□□□□□ -0.21
TRIM65-202ENST00000540128 C3orf79P0CE67 100 aa13.74□□□□□ -0.21
TRIM65-202ENST00000540128 LEPROTO15243 131 aa13.73□□□□□ -0.21
TRIM65-202ENST00000540128 PHF5AQ7RTV0 110 aaKnown RBP13.73□□□□□ -0.21
TRIM65-202ENST00000540128 FAM19A5Q7Z5A7 132 aaPredicted RBP13.72□□□□□ -0.21
TRIM65-202ENST00000540128 PLEKHB2Q96CS7 222 aa13.72□□□□□ -0.21
TRIM65-202ENST00000540128 PFN2P35080 140 aa13.71□□□□□ -0.21
TRIM65-202ENST00000540128 HERVK_113P61574 105 aa13.71□□□□□ -0.21
TRIM65-202ENST00000540128 PLA2G2DQ9UNK4 145 aa13.71□□□□□ -0.21
TRIM65-202ENST00000540128 HERV-K104P63124 156 aa13.7□□□□□ -0.22
TRIM65-202ENST00000540128 PRR3P79522 188 aaKnown RBP13.7□□□□□ -0.22
TRIM65-202ENST00000540128 SERTAD4-AS1Q5TG53 156 aa13.7□□□□□ -0.22
TRIM65-202ENST00000540128 NDUFA12Q9UI09 145 aa13.7□□□□□ -0.22
TRIM65-202ENST00000540128 TSPEAR-AS2P59090 65 aa13.69□□□□□ -0.22
TRIM65-202ENST00000540128 HIST3H2BBQ8N257 126 aa13.69□□□□□ -0.22
TRIM65-202ENST00000540128 KRTDAPP60985 99 aa13.68□□□□□ -0.22
TRIM65-202ENST00000540128 MYMXA0A1B0GTQ4 84 aa13.67□□□□□ -0.22
TRIM65-202ENST00000540128 J3QQQ9 107 aa13.67□□□□□ -0.22
TRIM65-202ENST00000540128 M0QXV9 152 aa13.67□□□□□ -0.22
TRIM65-202ENST00000540128 HNRNPA3P51991 378 aaKnown RBP13.67□□□□□ -0.22
TRIM65-202ENST00000540128 SND1-IT1Q9HBX3 110 aa13.67□□□□□ -0.22
TRIM65-202ENST00000540128 TP73-AS1Q9UF72 201 aa13.67□□□□□ -0.22
TRIM65-202ENST00000540128 E9PLD3 99 aa13.66□□□□□ -0.22
TRIM65-202ENST00000540128 C22orf24Q9Y442 160 aa13.66□□□□□ -0.22
TRIM65-202ENST00000540128 LINC00587B1AMM8 73 aa13.65□□□□□ -0.22
TRIM65-202ENST00000540128 S100A6P06703 90 aa13.65□□□□□ -0.22
TRIM65-202ENST00000540128 NMUP48645 174 aa13.65□□□□□ -0.22
TRIM65-202ENST00000540128 IGLV5-37A0A075B6J1 123 aa13.64□□□□□ -0.23
TRIM65-202ENST00000540128 LINC00158P58513 81 aa13.64□□□□□ -0.23
TRIM65-202ENST00000540128 KRTAP11-1Q8IUC1 163 aa13.64□□□□□ -0.23
TRIM65-202ENST00000540128 HIST1H2BLQ99880 126 aa13.64□□□□□ -0.23
TRIM65-202ENST00000540128 PSORS1C2Q9UIG4 136 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms