RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 SYCNQ0VAF6 134 aa4.23□□□□□ -1.73
SNHG1-212ENST00000539975 WFDC2Q14508 124 aa4.23□□□□□ -1.73
SNHG1-212ENST00000539975 TMEM170BQ5T4T1 132 aa4.23□□□□□ -1.73
SNHG1-212ENST00000539975 ZC2HC1BQ5TFG8 222 aa4.23□□□□□ -1.73
SNHG1-212ENST00000539975 FAM19A3Q7Z5A8 133 aa4.23□□□□□ -1.73
SNHG1-212ENST00000539975 C2orf48Q96LS8 159 aa4.23□□□□□ -1.73
SNHG1-212ENST00000539975 CARD19Q96LW7 228 aa4.23□□□□□ -1.73
SNHG1-212ENST00000539975 CHAC1Q9BUX1 264 aa4.23□□□□□ -1.73
SNHG1-212ENST00000539975 PLECQ15149 4684 aaKnown RBP4.22□□□□□ -1.73
SNHG1-212ENST00000539975 DYNC2H1Q8NCM8 4307 aaKnown RBP4.22□□□□□ -1.73
SNHG1-212ENST00000539975 ALMS1Q8TCU4 4167 aa4.22□□□□□ -1.73
SNHG1-212ENST00000539975 IGLV4-69A0A075B6H9 119 aa4.22□□□□□ -1.73
SNHG1-212ENST00000539975 A0A096LNJ9 63 aa4.22□□□□□ -1.73
SNHG1-212ENST00000539975 TRAV12-1A0A0B4J245 112 aa4.22□□□□□ -1.73
SNHG1-212ENST00000539975 PLNP26678 52 aa4.22□□□□□ -1.73
SNHG1-212ENST00000539975 COX6A2Q02221 97 aa4.22□□□□□ -1.73
SNHG1-212ENST00000539975 LINC00173Q6ZV60 143 aa4.22□□□□□ -1.73
SNHG1-212ENST00000539975 C15orf56Q8N910 161 aa4.22□□□□□ -1.73
SNHG1-212ENST00000539975 C9orf163Q8N9P6 203 aa4.22□□□□□ -1.73
SNHG1-212ENST00000539975 FAM104AQ969W3 186 aa4.22□□□□□ -1.73
SNHG1-212ENST00000539975 LINC00474Q9P2X8 69 aa4.22□□□□□ -1.73
SNHG1-212ENST00000539975 CDKN2A-AS1Q9UH64 79 aa4.22□□□□□ -1.73
SNHG1-212ENST00000539975 KMT2CQ8NEZ4 4911 aaKnown RBP4.22□□□□□ -1.73
SNHG1-212ENST00000539975 C20orf202A1L168 122 aa4.21□□□□□ -1.74
SNHG1-212ENST00000539975 HSBP1L1C9JCN9 74 aa4.21□□□□□ -1.74
SNHG1-212ENST00000539975 F8VRH5 84 aa4.21□□□□□ -1.74
SNHG1-212ENST00000539975 IGLC3P0DOY3 106 aa4.21□□□□□ -1.74
SNHG1-212ENST00000539975 FUSP35637 526 aaKnown RBP eCLIP4.21□□□□□ -1.74
SNHG1-212ENST00000539975 CXCL5P42830 114 aa4.21□□□□□ -1.74
SNHG1-212ENST00000539975 PCP4P48539 62 aa4.21□□□□□ -1.74
SNHG1-212ENST00000539975 AKR1D1P51857 326 aa4.21□□□□□ -1.74
SNHG1-212ENST00000539975 HERVK_113P61574 105 aa4.21□□□□□ -1.74
SNHG1-212ENST00000539975 LOC107984640A0A0U1RRK4 108 aa4.2□□□□□ -1.74
SNHG1-212ENST00000539975 DPM2O94777 84 aa4.2□□□□□ -1.74
SNHG1-212ENST00000539975 SFTA2Q6UW10 78 aa4.2□□□□□ -1.74
SNHG1-212ENST00000539975 Q8IZM0 81 aa4.2□□□□□ -1.74
SNHG1-212ENST00000539975 COX7B2Q8TF08 81 aa4.2□□□□□ -1.74
SNHG1-212ENST00000539975 LINC00526Q96FQ7 95 aa4.2□□□□□ -1.74
SNHG1-212ENST00000539975 LYSTQ99698 3801 aa4.2□□□□□ -1.74
SNHG1-212ENST00000539975 IGLV5-45A0A087WSX0 123 aa4.19□□□□□ -1.74
SNHG1-212ENST00000539975 TRBV30A0A0K0K1B3 111 aa4.19□□□□□ -1.74
SNHG1-212ENST00000539975 NUPR1O60356 82 aa4.19□□□□□ -1.74
SNHG1-212ENST00000539975 CDK2AP2O75956 126 aa4.19□□□□□ -1.74
SNHG1-212ENST00000539975 IGKCP01834 107 aa4.19□□□□□ -1.74
SNHG1-212ENST00000539975 SPINK8P0C7L1 97 aa4.19□□□□□ -1.74
SNHG1-212ENST00000539975 KRTDAPP60985 99 aa4.19□□□□□ -1.74
SNHG1-212ENST00000539975 RPL18AQ02543 176 aaKnown RBP4.19□□□□□ -1.74
SNHG1-212ENST00000539975 LINC01620Q4KN68 170 aa4.19□□□□□ -1.74
SNHG1-212ENST00000539975 COA6Q5JTJ3 125 aaKnown RBP4.19□□□□□ -1.74
SNHG1-212ENST00000539975 Q6ZRU5 148 aa4.19□□□□□ -1.74
SNHG1-212ENST00000539975 MRPL35Q9NZE8 188 aaKnown RBP4.19□□□□□ -1.74
SNHG1-212ENST00000539975 IGKV2-24A0A0C4DH68 120 aa4.18□□□□□ -1.74
SNHG1-212ENST00000539975 C11orf86A6NJI1 115 aa4.18□□□□□ -1.74
SNHG1-212ENST00000539975 LINC00587B1AMM8 73 aa4.18□□□□□ -1.74
SNHG1-212ENST00000539975 SMIM1B2RUZ4 78 aa4.18□□□□□ -1.74
SNHG1-212ENST00000539975 SYS1-DBNDD2H3BUS1 97 aa4.18□□□□□ -1.74
SNHG1-212ENST00000539975 ZNF22P17026 224 aaPredicted RBP4.18□□□□□ -1.74
SNHG1-212ENST00000539975 KRTAP10-1P60331 282 aa4.18□□□□□ -1.74
SNHG1-212ENST00000539975 GAGE2BQ13066 116 aa4.18□□□□□ -1.74
SNHG1-212ENST00000539975 PET117Q6UWS5 81 aa4.18□□□□□ -1.74
SNHG1-212ENST00000539975 C2orf82Q6UX34 121 aa4.17□□□□□ -1.74
SNHG1-212ENST00000539975 UNQ6190/PRO20217Q6UXQ8 127 aa4.17□□□□□ -1.74
SNHG1-212ENST00000539975 SDIM1Q6ZPB5 146 aa4.17□□□□□ -1.74
SNHG1-212ENST00000539975 RYR2Q92736 4967 aa4.16□□□□□ -1.74
SNHG1-212ENST00000539975 TMEM223A0PJW6 202 aa4.16□□□□□ -1.74
SNHG1-212ENST00000539975 NDUFC2-KCTD14E9PQ53 114 aa4.16□□□□□ -1.74
SNHG1-212ENST00000539975 LGALS3P17931 250 aaKnown RBP4.16□□□□□ -1.74
SNHG1-212ENST00000539975 SNRPEP62304 92 aaKnown RBP4.16□□□□□ -1.74
SNHG1-212ENST00000539975 KIAA0087Q14695 138 aa4.16□□□□□ -1.74
SNHG1-212ENST00000539975 GAGE2EQ4V326 116 aa4.16□□□□□ -1.74
SNHG1-212ENST00000539975 PLEKHB2Q96CS7 222 aa4.16□□□□□ -1.74
SNHG1-212ENST00000539975 PMCHL2Q9BQD1 86 aa4.16□□□□□ -1.74
SNHG1-212ENST00000539975 GAGE2DQ9UEU5 116 aa4.16□□□□□ -1.74
SNHG1-212ENST00000539975 VPS13DQ5THJ4 4388 aa4.15□□□□□ -1.74
SNHG1-212ENST00000539975 IGLV5-39A0A0G2JS06 123 aa4.15□□□□□ -1.75
SNHG1-212ENST00000539975 MYMXA0A1B0GTQ4 84 aa4.15□□□□□ -1.75
SNHG1-212ENST00000539975 C3orf79P0CE67 100 aa4.15□□□□□ -1.75
SNHG1-212ENST00000539975 HERV-K104P63124 156 aa4.15□□□□□ -1.75
SNHG1-212ENST00000539975 CIRBPQ14011 172 aaKnown RBP4.15□□□□□ -1.75
SNHG1-212ENST00000539975 COX17Q14061 63 aa4.15□□□□□ -1.75
SNHG1-212ENST00000539975 MEIG1Q5JSS6 88 aa4.15□□□□□ -1.75
SNHG1-212ENST00000539975 STPG4Q8N801 248 aa4.15□□□□□ -1.75
SNHG1-212ENST00000539975 C7orf33Q8WU49 177 aa4.15□□□□□ -1.75
SNHG1-212ENST00000539975 C6orf48Q9UBA6 75 aa4.15□□□□□ -1.75
SNHG1-212ENST00000539975 RYR3Q15413 4870 aa4.15□□□□□ -1.75
SNHG1-212ENST00000539975 DNAH1Q9P2D7 4330 aa4.14□□□□□ -1.75
SNHG1-212ENST00000539975 KMT2AQ03164 3969 aa4.14□□□□□ -1.75
SNHG1-212ENST00000539975 HYDINQ4G0P3 5121 aa4.14□□□□□ -1.75
SNHG1-212ENST00000539975 A0A096LNI7 61 aa4.14□□□□□ -1.75
SNHG1-212ENST00000539975 LEPROTO15243 131 aa4.14□□□□□ -1.75
SNHG1-212ENST00000539975 TLX1NBP0CAT3 122 aa4.14□□□□□ -1.75
SNHG1-212ENST00000539975 PFN2P35080 140 aa4.14□□□□□ -1.75
SNHG1-212ENST00000539975 NMUP48645 174 aa4.14□□□□□ -1.75
SNHG1-212ENST00000539975 LINC00158P58513 81 aa4.14□□□□□ -1.75
SNHG1-212ENST00000539975 C10orf25Q5T742 122 aa4.14□□□□□ -1.75
SNHG1-212ENST00000539975 LINC01545Q5VT33 79 aa4.14□□□□□ -1.75
SNHG1-212ENST00000539975 Q6ZSA8 131 aa4.14□□□□□ -1.75
SNHG1-212ENST00000539975 SCXQ7RTU7 201 aa4.14□□□□□ -1.75
SNHG1-212ENST00000539975 HIST3H2BBQ8N257 126 aa4.14□□□□□ -1.75
SNHG1-212ENST00000539975 CIRBP-AS1Q8TBR5 109 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms