RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	HNRNPA3	P51991	378 aa	Known RBP	7.67	□□□□□ -1.18
CLTCL1-205	ENST00000538828	PDZD11	Q5EBL8	140 aa		7.67	□□□□□ -1.18
CLTCL1-205	ENST00000538828	C6orf226	Q5I0X4	101 aa		7.67	□□□□□ -1.18
CLTCL1-205	ENST00000538828	ZC2HC1B	Q5TFG8	222 aa		7.67	□□□□□ -1.18
CLTCL1-205	ENST00000538828		A0A1W2PNN7	141 aa		7.66	□□□□□ -1.18
CLTCL1-205	ENST00000538828	HBD	P02042	147 aa		7.66	□□□□□ -1.18
CLTCL1-205	ENST00000538828	CKS1B	P61024	79 aa		7.66	□□□□□ -1.18
CLTCL1-205	ENST00000538828		A0A096LNJ9	63 aa		7.65	□□□□□ -1.18
CLTCL1-205	ENST00000538828		F8VRH5	84 aa		7.65	□□□□□ -1.18
CLTCL1-205	ENST00000538828	SPINK6	Q6UWN8	80 aa		7.65	□□□□□ -1.18
CLTCL1-205	ENST00000538828	URB1-AS1	Q96HZ7	61 aa		7.65	□□□□□ -1.18
CLTCL1-205	ENST00000538828	SMIM1	B2RUZ4	78 aa		7.64	□□□□□ -1.19
CLTCL1-205	ENST00000538828	ATP5L	O75964	103 aa		7.64	□□□□□ -1.19
CLTCL1-205	ENST00000538828	C2orf82	Q6UX34	121 aa		7.64	□□□□□ -1.19
CLTCL1-205	ENST00000538828	LINC00469	Q8N7U9	141 aa		7.64	□□□□□ -1.19
CLTCL1-205	ENST00000538828	CHCHD1	Q96BP2	118 aa	Known RBP	7.64	□□□□□ -1.19
CLTCL1-205	ENST00000538828	LRP1	Q07954	4544 aa	Known RBP	7.64	□□□□□ -1.19
CLTCL1-205	ENST00000538828	PKHD1L1	Q86WI1	4243 aa		7.64	□□□□□ -1.19
CLTCL1-205	ENST00000538828		H3BRM9	83 aa		7.63	□□□□□ -1.19
CLTCL1-205	ENST00000538828	IGLC3	P0DOY3	106 aa		7.63	□□□□□ -1.19
CLTCL1-205	ENST00000538828	SRSF9	Q13242	221 aa	Known RBP eCLIP	7.63	□□□□□ -1.19
CLTCL1-205	ENST00000538828	TOMM7	Q9P0U1	55 aa		7.63	□□□□□ -1.19
CLTCL1-205	ENST00000538828	SERTAD4-AS1	Q5TG53	156 aa		7.62	□□□□□ -1.19
CLTCL1-205	ENST00000538828	COX7B2	Q8TF08	81 aa		7.61	□□□□□ -1.19
CLTCL1-205	ENST00000538828	FAT3	Q8TDW7	4589 aa		7.61	□□□□□ -1.19
CLTCL1-205	ENST00000538828	IGLV5-39	A0A0G2JS06	123 aa		7.6	□□□□□ -1.19
CLTCL1-205	ENST00000538828	GAGE2E	Q4V326	116 aa		7.6	□□□□□ -1.19
CLTCL1-205	ENST00000538828	SFTA2	Q6UW10	78 aa		7.6	□□□□□ -1.19
CLTCL1-205	ENST00000538828	GAGE2D	Q9UEU5	116 aa		7.6	□□□□□ -1.19
CLTCL1-205	ENST00000538828	PSORS1C2	Q9UIG4	136 aa		7.6	□□□□□ -1.19
CLTCL1-205	ENST00000538828	MT1HL1	P0DM35	61 aa		7.59	□□□□□ -1.19
CLTCL1-205	ENST00000538828	C9orf129	Q5T035	196 aa	Known RBP	7.59	□□□□□ -1.19
CLTCL1-205	ENST00000538828	REG3G	Q6UW15	175 aa		7.59	□□□□□ -1.19
CLTCL1-205	ENST00000538828	LINC01600	Q96MT4	127 aa		7.59	□□□□□ -1.19
CLTCL1-205	ENST00000538828	TP73-AS1	Q9UF72	201 aa		7.59	□□□□□ -1.19
CLTCL1-205	ENST00000538828	TRAV12-1	A0A0B4J245	112 aa		7.58	□□□□□ -1.2
CLTCL1-205	ENST00000538828	PHF5A	Q7RTV0	110 aa	Known RBP	7.58	□□□□□ -1.2
CLTCL1-205	ENST00000538828		M0QXV9	152 aa		7.57	□□□□□ -1.2
CLTCL1-205	ENST00000538828	ZNF22	P17026	224 aa	Predicted RBP	7.57	□□□□□ -1.2
CLTCL1-205	ENST00000538828	KRTAP7-1	Q8IUC3	87 aa		7.57	□□□□□ -1.2
CLTCL1-205	ENST00000538828	CBLN2	Q8IUK8	224 aa		7.57	□□□□□ -1.2
CLTCL1-205	ENST00000538828	PLA2G2D	Q9UNK4	145 aa		7.57	□□□□□ -1.2
CLTCL1-205	ENST00000538828	FAM168B	A1KXE4	195 aa		7.56	□□□□□ -1.2
CLTCL1-205	ENST00000538828	SPINK8	P0C7L1	97 aa		7.56	□□□□□ -1.2
CLTCL1-205	ENST00000538828	LBH	Q53QV2	105 aa	Predicted RBP	7.56	□□□□□ -1.2
CLTCL1-205	ENST00000538828	BAGE3	Q86Y29	109 aa		7.56	□□□□□ -1.2
CLTCL1-205	ENST00000538828	NDUFA6	P56556	154 aa		7.55	□□□□□ -1.2
CLTCL1-205	ENST00000538828	COX17	Q14061	63 aa		7.55	□□□□□ -1.2
CLTCL1-205	ENST00000538828	PMCHL1	Q16048	86 aa		7.55	□□□□□ -1.2
CLTCL1-205	ENST00000538828	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	7.55	□□□□□ -1.2
CLTCL1-205	ENST00000538828	IFI27L1	Q96BM0	104 aa		7.55	□□□□□ -1.2
CLTCL1-205	ENST00000538828	HSBP1	O75506	76 aa		7.54	□□□□□ -1.2
CLTCL1-205	ENST00000538828	TRGC2	P03986	189 aa		7.54	□□□□□ -1.2
CLTCL1-205	ENST00000538828	IGLV7-43	P04211	117 aa		7.54	□□□□□ -1.2
CLTCL1-205	ENST00000538828	C1orf137	Q5JT78	98 aa		7.54	□□□□□ -1.2
CLTCL1-205	ENST00000538828	SLC7A5P1	Q8MH63	180 aa		7.54	□□□□□ -1.2
CLTCL1-205	ENST00000538828	IGLV5-37	A0A075B6J1	123 aa		7.53	□□□□□ -1.2
CLTCL1-205	ENST00000538828	C11orf86	A6NJI1	115 aa		7.53	□□□□□ -1.2
CLTCL1-205	ENST00000538828	NUPR1	O60356	82 aa		7.53	□□□□□ -1.2
CLTCL1-205	ENST00000538828	DIRC1	Q969H9	104 aa		7.53	□□□□□ -1.2
CLTCL1-205	ENST00000538828	CHTOP	Q9Y3Y2	248 aa	Known RBP	7.53	□□□□□ -1.2
CLTCL1-205	ENST00000538828	C22orf24	Q9Y442	160 aa		7.53	□□□□□ -1.2
CLTCL1-205	ENST00000538828	COLCA2	A8K830	154 aa		7.52	□□□□□ -1.21
CLTCL1-205	ENST00000538828	KRTAP10-8	P60410	259 aa		7.52	□□□□□ -1.21
CLTCL1-205	ENST00000538828	UBE2B	P63146	152 aa		7.52	□□□□□ -1.21
CLTCL1-205	ENST00000538828	XAGE1A	Q9HD64	81 aa		7.52	□□□□□ -1.21
CLTCL1-205	ENST00000538828	TMEM170B	Q5T4T1	132 aa		7.51	□□□□□ -1.21
CLTCL1-205	ENST00000538828	MRPL55	Q7Z7F7	128 aa	Known RBP	7.51	□□□□□ -1.21
CLTCL1-205	ENST00000538828	KRTAP11-1	Q8IUC1	163 aa		7.51	□□□□□ -1.21
CLTCL1-205	ENST00000538828	TMEM223	A0PJW6	202 aa		7.5	□□□□□ -1.21
CLTCL1-205	ENST00000538828		H0Y9J4	135 aa		7.49	□□□□□ -1.21
CLTCL1-205	ENST00000538828	LEPROTL1	O95214	131 aa		7.49	□□□□□ -1.21
CLTCL1-205	ENST00000538828	ZNF625	Q96I27	306 aa	Predicted RBP	7.49	□□□□□ -1.21
CLTCL1-205	ENST00000538828	ERG28	Q9UKR5	140 aa		7.49	□□□□□ -1.21
CLTCL1-205	ENST00000538828	SERF1A	O75920	110 aa		7.48	□□□□□ -1.21
CLTCL1-205	ENST00000538828	LINC00310	P59036	64 aa		7.48	□□□□□ -1.21
CLTCL1-205	ENST00000538828	HSPB8	Q9UJY1	196 aa		7.48	□□□□□ -1.21
CLTCL1-205	ENST00000538828	LINC00587	B1AMM8	73 aa		7.47	□□□□□ -1.21
CLTCL1-205	ENST00000538828	ZNF861P	O60384	105 aa		7.47	□□□□□ -1.21
CLTCL1-205	ENST00000538828	FAM19A2	Q8N3H0	131 aa		7.47	□□□□□ -1.21
CLTCL1-205	ENST00000538828	PLN	P26678	52 aa		7.46	□□□□□ -1.22
CLTCL1-205	ENST00000538828	HERV-K104	P63124	156 aa		7.46	□□□□□ -1.22
CLTCL1-205	ENST00000538828	RPL24	P83731	157 aa	Known RBP	7.46	□□□□□ -1.22
CLTCL1-205	ENST00000538828	IGLV1-50	A0A075B6I6	118 aa		7.45	□□□□□ -1.22
CLTCL1-205	ENST00000538828	NKAPP1	Q8N9T2	125 aa		7.45	□□□□□ -1.22
CLTCL1-205	ENST00000538828	LINC00167	Q96N53	147 aa		7.45	□□□□□ -1.22
CLTCL1-205	ENST00000538828	SND1-IT1	Q9HBX3	110 aa		7.45	□□□□□ -1.22
CLTCL1-205	ENST00000538828	TNXB	P22105	4242 aa		7.44	□□□□□ -1.22
CLTCL1-205	ENST00000538828	BCE1	O60756	84 aa		7.44	□□□□□ -1.22
CLTCL1-205	ENST00000538828	PFN2	P35080	140 aa		7.44	□□□□□ -1.22
CLTCL1-205	ENST00000538828	RPL28	P46779	137 aa	Known RBP	7.44	□□□□□ -1.22
CLTCL1-205	ENST00000538828	ATP6V1G1	O75348	118 aa		7.43	□□□□□ -1.22
CLTCL1-205	ENST00000538828	VPREB1	P12018	145 aa		7.43	□□□□□ -1.22
CLTCL1-205	ENST00000538828	KRTAP1-4	P0C5Y4	121 aa		7.42	□□□□□ -1.22
CLTCL1-205	ENST00000538828	RPL13A	P40429	203 aa	Known RBP	7.42	□□□□□ -1.22
CLTCL1-205	ENST00000538828	MYMX	A0A1B0GTQ4	84 aa		7.41	□□□□□ -1.22
CLTCL1-205	ENST00000538828	DPM2	O94777	84 aa		7.41	□□□□□ -1.22
CLTCL1-205	ENST00000538828	S100A1	P23297	94 aa		7.41	□□□□□ -1.22
CLTCL1-205	ENST00000538828	PLEKHB2	Q96CS7	222 aa		7.41	□□□□□ -1.22
CLTCL1-205	ENST00000538828	MAP1LC3C	Q9BXW4	147 aa		7.41	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms