RNA–Protein interactions for RNA: ENST00000537597.1

SRRM4-202, Transcript of serine/arginine repetitive matrix 4, humanhuman

TSL 4

Gene SRRM4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-202ENST00000537597 Q5VSD8 79 aa9.55□□□□□ -0.88
SRRM4-202ENST00000537597 GEMIN7Q9H840 131 aaKnown RBP9.55□□□□□ -0.88
SRRM4-202ENST00000537597 LOC107984640A0A0U1RRK4 108 aa9.54□□□□□ -0.88
SRRM4-202ENST00000537597 NDUFA1O15239 70 aa9.54□□□□□ -0.88
SRRM4-202ENST00000537597 ZNF22P17026 224 aaPredicted RBP9.54□□□□□ -0.88
SRRM4-202ENST00000537597 PTTG1IPP53801 180 aa9.54□□□□□ -0.88
SRRM4-202ENST00000537597 COA6Q5JTJ3 125 aaKnown RBP9.54□□□□□ -0.88
SRRM4-202ENST00000537597 IFI27L1Q96BM0 104 aa9.54□□□□□ -0.88
SRRM4-202ENST00000537597 TRBV30A0A0K0K1B3 111 aa9.53□□□□□ -0.88
SRRM4-202ENST00000537597 HSBP1O75506 76 aa9.53□□□□□ -0.88
SRRM4-202ENST00000537597 C2orf82Q6UX34 121 aa9.53□□□□□ -0.88
SRRM4-202ENST00000537597 LINC00528Q8N1L1 170 aa9.53□□□□□ -0.88
SRRM4-202ENST00000537597 MYCBP2O75592 4640 aa9.52□□□□□ -0.88
SRRM4-202ENST00000537597 C11orf86A6NJI1 115 aa9.52□□□□□ -0.89
SRRM4-202ENST00000537597 ATP6V1G1O75348 118 aa9.52□□□□□ -0.89
SRRM4-202ENST00000537597 LINC00469Q8N7U9 141 aa9.52□□□□□ -0.89
SRRM4-202ENST00000537597 LINC00474Q9P2X8 69 aa9.52□□□□□ -0.89
SRRM4-202ENST00000537597 PKIGQ9Y2B9 76 aa9.52□□□□□ -0.89
SRRM4-202ENST00000537597 Q6ZRP5 223 aa9.51□□□□□ -0.89
SRRM4-202ENST00000537597 KRTAP7-1Q8IUC3 87 aa9.51□□□□□ -0.89
SRRM4-202ENST00000537597 A0A1W2PNN7 141 aa9.5□□□□□ -0.89
SRRM4-202ENST00000537597 FAM229AH3BQW9 127 aa9.5□□□□□ -0.89
SRRM4-202ENST00000537597 IGKV2-24A0A0C4DH68 120 aa9.49□□□□□ -0.89
SRRM4-202ENST00000537597 ODF1Q14990 250 aa9.49□□□□□ -0.89
SRRM4-202ENST00000537597 MAJINQ3KP22 176 aa9.49□□□□□ -0.89
SRRM4-202ENST00000537597 C6orf226Q5I0X4 101 aa9.49□□□□□ -0.89
SRRM4-202ENST00000537597 CHTOPQ9Y3Y2 248 aaKnown RBP9.49□□□□□ -0.89
SRRM4-202ENST00000537597 LEPROTL1O95214 131 aa9.48□□□□□ -0.89
SRRM4-202ENST00000537597 SPINK8P0C7L1 97 aa9.48□□□□□ -0.89
SRRM4-202ENST00000537597 C9orf116Q5BN46 136 aaPredicted RBP9.48□□□□□ -0.89
SRRM4-202ENST00000537597 STPG4Q8N801 248 aa9.48□□□□□ -0.89
SRRM4-202ENST00000537597 COX7B2Q8TF08 81 aa9.48□□□□□ -0.89
SRRM4-202ENST00000537597 PACRGQ96M98 296 aaPredicted RBP9.48□□□□□ -0.89
SRRM4-202ENST00000537597 FAT3Q8TDW7 4589 aa9.48□□□□□ -0.89
SRRM4-202ENST00000537597 F8VRH5 84 aa9.47□□□□□ -0.89
SRRM4-202ENST00000537597 CXCL5P42830 114 aa9.47□□□□□ -0.89
SRRM4-202ENST00000537597 NDUFA6P56556 154 aa9.47□□□□□ -0.89
SRRM4-202ENST00000537597 LRP1Q07954 4544 aaKnown RBP9.46□□□□□ -0.89
SRRM4-202ENST00000537597 TMEM223A0PJW6 202 aa9.46□□□□□ -0.9
SRRM4-202ENST00000537597 NDUFC2-KCTD14E9PQ53 114 aa9.46□□□□□ -0.9
SRRM4-202ENST00000537597 H3BRM9 83 aa9.46□□□□□ -0.9
SRRM4-202ENST00000537597 GAGE2BQ13066 116 aa9.46□□□□□ -0.9
SRRM4-202ENST00000537597 TOMM7Q9P0U1 55 aa9.46□□□□□ -0.9
SRRM4-202ENST00000537597 PRSS2P07478 247 aa9.45□□□□□ -0.9
SRRM4-202ENST00000537597 C9orf129Q5T035 196 aaKnown RBP9.45□□□□□ -0.9
SRRM4-202ENST00000537597 PLA2G1BP04054 148 aaKnown RBP9.44□□□□□ -0.9
SRRM4-202ENST00000537597 CKS1BP61024 79 aa9.44□□□□□ -0.9
SRRM4-202ENST00000537597 ZNF625Q96I27 306 aaPredicted RBP9.44□□□□□ -0.9
SRRM4-202ENST00000537597 HSPB8Q9UJY1 196 aa9.44□□□□□ -0.9
SRRM4-202ENST00000537597 FLG2Q5D862 2391 aaPredicted RBP9.44□□□□□ -0.9
SRRM4-202ENST00000537597 INAFM2P0DMQ5 153 aa9.43□□□□□ -0.9
SRRM4-202ENST00000537597 DPH3Q96FX2 82 aa9.43□□□□□ -0.9
SRRM4-202ENST00000537597 FABP4P15090 132 aa9.42□□□□□ -0.9
SRRM4-202ENST00000537597 HNRNPA3P51991 378 aaKnown RBP9.42□□□□□ -0.9
SRRM4-202ENST00000537597 RPL18AQ02543 176 aaKnown RBP9.42□□□□□ -0.9
SRRM4-202ENST00000537597 FAM168BA1KXE4 195 aa9.41□□□□□ -0.9
SRRM4-202ENST00000537597 TMEM170BQ5T4T1 132 aa9.41□□□□□ -0.9
SRRM4-202ENST00000537597 RPL37AP61513 92 aaKnown RBP9.4□□□□□ -0.9
SRRM4-202ENST00000537597 GAGE2EQ4V326 116 aa9.39□□□□□ -0.91
SRRM4-202ENST00000537597 KRTAP11-1Q8IUC1 163 aa9.39□□□□□ -0.91
SRRM4-202ENST00000537597 GAGE2DQ9UEU5 116 aa9.39□□□□□ -0.91
SRRM4-202ENST00000537597 SYS1-DBNDD2H3BUS1 97 aa9.38□□□□□ -0.91
SRRM4-202ENST00000537597 PLA2G2DQ9UNK4 145 aa9.38□□□□□ -0.91
SRRM4-202ENST00000537597 SRSF9Q13242 221 aaKnown RBP eCLIP9.37□□□□□ -0.91
SRRM4-202ENST00000537597 LINC01545Q5VT33 79 aa9.37□□□□□ -0.91
SRRM4-202ENST00000537597 PLNP26678 52 aa9.36□□□□□ -0.91
SRRM4-202ENST00000537597 PRR3P79522 188 aaKnown RBP9.36□□□□□ -0.91
SRRM4-202ENST00000537597 SERTAD4-AS1Q5TG53 156 aa9.36□□□□□ -0.91
SRRM4-202ENST00000537597 PHF5AQ7RTV0 110 aaKnown RBP9.36□□□□□ -0.91
SRRM4-202ENST00000537597 MAP1LC3CQ9BXW4 147 aa9.36□□□□□ -0.91
SRRM4-202ENST00000537597 TNXBP22105 4242 aa9.36□□□□□ -0.91
SRRM4-202ENST00000537597 DPM2O94777 84 aa9.35□□□□□ -0.91
SRRM4-202ENST00000537597 COX17Q14061 63 aa9.35□□□□□ -0.91
SRRM4-202ENST00000537597 SFTA2Q6UW10 78 aa9.35□□□□□ -0.91
SRRM4-202ENST00000537597 C7orf33Q8WU49 177 aa9.35□□□□□ -0.91
SRRM4-202ENST00000537597 PMCHL2Q9BQD1 86 aa9.35□□□□□ -0.91
SRRM4-202ENST00000537597 IGLV5-37A0A075B6J1 123 aa9.34□□□□□ -0.91
SRRM4-202ENST00000537597 IGKCP01834 107 aa9.34□□□□□ -0.91
SRRM4-202ENST00000537597 C3orf79P0CE67 100 aa9.34□□□□□ -0.91
SRRM4-202ENST00000537597 TSPEAR-AS2P59090 65 aa9.34□□□□□ -0.91
SRRM4-202ENST00000537597 PET117Q6UWS5 81 aa9.34□□□□□ -0.91
SRRM4-202ENST00000537597 XAGE1AQ9HD64 81 aa9.34□□□□□ -0.91
SRRM4-202ENST00000537597 ERG28Q9UKR5 140 aa9.34□□□□□ -0.91
SRRM4-202ENST00000537597 HERC1Q15751 4861 aa9.33□□□□□ -0.92
SRRM4-202ENST00000537597 H0Y8G0 127 aa9.33□□□□□ -0.92
SRRM4-202ENST00000537597 LEPROTO15243 131 aa9.33□□□□□ -0.92
SRRM4-202ENST00000537597 TP73-AS1Q9UF72 201 aa9.33□□□□□ -0.92
SRRM4-202ENST00000537597 PSORS1C2Q9UIG4 136 aa9.32□□□□□ -0.92
SRRM4-202ENST00000537597 C22orf24Q9Y442 160 aa9.32□□□□□ -0.92
SRRM4-202ENST00000537597 KRTAP29-1A8MX34 341 aaPredicted RBP9.31□□□□□ -0.92
SRRM4-202ENST00000537597 HIST3H2BBQ8N257 126 aa9.31□□□□□ -0.92
SRRM4-202ENST00000537597 Q8NDZ9 215 aa9.31□□□□□ -0.92
SRRM4-202ENST00000537597 FAM19A5Q7Z5A7 132 aaPredicted RBP9.3□□□□□ -0.92
SRRM4-202ENST00000537597 SND1-IT1Q9HBX3 110 aa9.3□□□□□ -0.92
SRRM4-202ENST00000537597 LOC107984156A0A0G2JMH3 177 aa9.29□□□□□ -0.92
SRRM4-202ENST00000537597 E9PLD3 99 aa9.29□□□□□ -0.92
SRRM4-202ENST00000537597 HERV-K104P63124 156 aa9.29□□□□□ -0.92
SRRM4-202ENST00000537597 ARL17AQ8IVW1 177 aa9.29□□□□□ -0.92
SRRM4-202ENST00000537597 PLEKHB2Q96CS7 222 aa9.29□□□□□ -0.92
SRRM4-202ENST00000537597 NDUFA12Q9UI09 145 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms