RNA–Protein interactions for RNA: ENST00000536872.5

COPS7A-205, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-205ENST00000536872 RNF151Q2KHN1 245 aa12.22□□□□□ -0.45
COPS7A-205ENST00000536872 STPG4Q8N801 248 aa12.22□□□□□ -0.45
COPS7A-205ENST00000536872 CHTOPQ9Y3Y2 248 aaKnown RBP12.22□□□□□ -0.45
COPS7A-205ENST00000536872 IGLV5-45A0A087WSX0 123 aa12.21□□□□□ -0.45
COPS7A-205ENST00000536872 SMIM1B2RUZ4 78 aa12.21□□□□□ -0.45
COPS7A-205ENST00000536872 H0Y8G0 127 aa12.21□□□□□ -0.45
COPS7A-205ENST00000536872 H3BRM9 83 aa12.21□□□□□ -0.45
COPS7A-205ENST00000536872 PTTG1IPP53801 180 aa12.21□□□□□ -0.45
COPS7A-205ENST00000536872 HIST1H2BKO60814 126 aa12.2□□□□□ -0.46
COPS7A-205ENST00000536872 HIST1H2BJP06899 126 aa12.2□□□□□ -0.46
COPS7A-205ENST00000536872 FABP4P15090 132 aa12.2□□□□□ -0.46
COPS7A-205ENST00000536872 HIST1H2BOP23527 126 aa12.2□□□□□ -0.46
COPS7A-205ENST00000536872 HIST1H2BBP33778 126 aa12.2□□□□□ -0.46
COPS7A-205ENST00000536872 HIST1H2BDP58876 126 aa12.2□□□□□ -0.46
COPS7A-205ENST00000536872 HIST1H2BCP62807 126 aa12.2□□□□□ -0.46
COPS7A-205ENST00000536872 HIST2H2BEQ16778 126 aa12.2□□□□□ -0.46
COPS7A-205ENST00000536872 C9orf116Q5BN46 136 aaPredicted RBP12.2□□□□□ -0.46
COPS7A-205ENST00000536872 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.2□□□□□ -0.46
COPS7A-205ENST00000536872 Q8IZM0 81 aa12.2□□□□□ -0.46
COPS7A-205ENST00000536872 HIST1H2BHQ93079 126 aa12.2□□□□□ -0.46
COPS7A-205ENST00000536872 HIST1H2BNQ99877 126 aa12.2□□□□□ -0.46
COPS7A-205ENST00000536872 HIST1H2BMQ99879 126 aa12.2□□□□□ -0.46
COPS7A-205ENST00000536872 LINC00474Q9P2X8 69 aa12.2□□□□□ -0.46
COPS7A-205ENST00000536872 ABCA13Q86UQ4 5058 aa12.19□□□□□ -0.46
COPS7A-205ENST00000536872 C11orf86A6NJI1 115 aa12.19□□□□□ -0.46
COPS7A-205ENST00000536872 LEPROTL1O95214 131 aa12.19□□□□□ -0.46
COPS7A-205ENST00000536872 COX7B2Q8TF08 81 aa12.19□□□□□ -0.46
COPS7A-205ENST00000536872 PLA2G1BP04054 148 aaKnown RBP12.18□□□□□ -0.46
COPS7A-205ENST00000536872 ZNF22P17026 224 aaPredicted RBP12.18□□□□□ -0.46
COPS7A-205ENST00000536872 GAGE2EQ4V326 116 aa12.18□□□□□ -0.46
COPS7A-205ENST00000536872 TMEM170BQ5T4T1 132 aa12.18□□□□□ -0.46
COPS7A-205ENST00000536872 PLAC8Q9NZF1 115 aa12.18□□□□□ -0.46
COPS7A-205ENST00000536872 GAGE2DQ9UEU5 116 aa12.18□□□□□ -0.46
COPS7A-205ENST00000536872 TRBV30A0A0K0K1B3 111 aa12.17□□□□□ -0.46
COPS7A-205ENST00000536872 SRRM2Q9UQ35 2752 aaKnown RBP12.16□□□□□ -0.46
COPS7A-205ENST00000536872 TRAV12-1A0A0B4J245 112 aa12.16□□□□□ -0.46
COPS7A-205ENST00000536872 INAFM2P0DMQ5 153 aa12.15□□□□□ -0.46
COPS7A-205ENST00000536872 Q6ZRP5 223 aa12.15□□□□□ -0.46
COPS7A-205ENST00000536872 HSPB8Q9UJY1 196 aa12.15□□□□□ -0.46
COPS7A-205ENST00000536872 FLG2Q5D862 2391 aaPredicted RBP12.13□□□□□ -0.47
COPS7A-205ENST00000536872 A0A1W2PNN7 141 aa12.13□□□□□ -0.47
COPS7A-205ENST00000536872 F8VRH5 84 aa12.13□□□□□ -0.47
COPS7A-205ENST00000536872 RPL37AP61513 92 aaKnown RBP12.13□□□□□ -0.47
COPS7A-205ENST00000536872 VPS13BQ7Z7G8 4022 aa12.13□□□□□ -0.47
COPS7A-205ENST00000536872 TLX1NBP0CAT3 122 aa12.12□□□□□ -0.47
COPS7A-205ENST00000536872 CXCL5P42830 114 aa12.12□□□□□ -0.47
COPS7A-205ENST00000536872 C7orf33Q8WU49 177 aa12.11□□□□□ -0.47
COPS7A-205ENST00000536872 IGLV5-39A0A0G2JS06 123 aa12.1□□□□□ -0.47
COPS7A-205ENST00000536872 NDUFC2-KCTD14E9PQ53 114 aa12.1□□□□□ -0.47
COPS7A-205ENST00000536872 ODF1Q14990 250 aa12.1□□□□□ -0.47
COPS7A-205ENST00000536872 FAM168BA1KXE4 195 aa12.08□□□□□ -0.48
COPS7A-205ENST00000536872 PMCHL2Q9BQD1 86 aa12.08□□□□□ -0.48
COPS7A-205ENST00000536872 MAP1LC3CQ9BXW4 147 aa12.08□□□□□ -0.48
COPS7A-205ENST00000536872 TMEM223A0PJW6 202 aa12.07□□□□□ -0.48
COPS7A-205ENST00000536872 FAM19A5Q7Z5A7 132 aaPredicted RBP12.06□□□□□ -0.48
COPS7A-205ENST00000536872 XAGE1AQ9HD64 81 aa12.06□□□□□ -0.48
COPS7A-205ENST00000536872 KRTAP10-4P60372 401 aaPredicted RBP12.05□□□□□ -0.48
COPS7A-205ENST00000536872 C9orf129Q5T035 196 aaKnown RBP12.05□□□□□ -0.48
COPS7A-205ENST00000536872 PHF5AQ7RTV0 110 aaKnown RBP12.05□□□□□ -0.48
COPS7A-205ENST00000536872 ZNF625Q96I27 306 aaPredicted RBP12.05□□□□□ -0.48
COPS7A-205ENST00000536872 PFN2P35080 140 aa12.04□□□□□ -0.48
COPS7A-205ENST00000536872 DPM2O94777 84 aa12.03□□□□□ -0.48
COPS7A-205ENST00000536872 PLNP26678 52 aa12.01□□□□□ -0.49
COPS7A-205ENST00000536872 COA6Q5JTJ3 125 aaKnown RBP12.01□□□□□ -0.49
COPS7A-205ENST00000536872 SYS1-DBNDD2H3BUS1 97 aa12□□□□□ -0.49
COPS7A-205ENST00000536872 IGKCP01834 107 aa12□□□□□ -0.49
COPS7A-205ENST00000536872 HNRNPA3P51991 378 aaKnown RBP11.98□□□□□ -0.49
COPS7A-205ENST00000536872 KRTAP7-1Q8IUC3 87 aa11.98□□□□□ -0.49
COPS7A-205ENST00000536872 ERG28Q9UKR5 140 aa11.98□□□□□ -0.49
COPS7A-205ENST00000536872 A0A0U1RRA0 63 aa11.97□□□□□ -0.49
COPS7A-205ENST00000536872 M0QXV9 152 aa11.97□□□□□ -0.49
COPS7A-205ENST00000536872 KRTDAPP60985 99 aa11.97□□□□□ -0.49
COPS7A-205ENST00000536872 PRR3P79522 188 aaKnown RBP11.97□□□□□ -0.49
COPS7A-205ENST00000536872 SERTAD4-AS1Q5TG53 156 aa11.97□□□□□ -0.49
COPS7A-205ENST00000536872 HERVK_113P61574 105 aa11.96□□□□□ -0.49
COPS7A-205ENST00000536872 LEPROTO15243 131 aa11.95□□□□□ -0.5
COPS7A-205ENST00000536872 C3orf79P0CE67 100 aa11.95□□□□□ -0.5
COPS7A-205ENST00000536872 LINC00158P58513 81 aa11.95□□□□□ -0.5
COPS7A-205ENST00000536872 SFTA2Q6UW10 78 aa11.95□□□□□ -0.5
COPS7A-205ENST00000536872 UBE2BP63146 152 aa11.94□□□□□ -0.5
COPS7A-205ENST00000536872 PET117Q6UWS5 81 aa11.94□□□□□ -0.5
COPS7A-205ENST00000536872 PLEKHB2Q96CS7 222 aa11.94□□□□□ -0.5
COPS7A-205ENST00000536872 NDUFA12Q9UI09 145 aa11.94□□□□□ -0.5
COPS7A-205ENST00000536872 PSORS1C2Q9UIG4 136 aa11.93□□□□□ -0.5
COPS7A-205ENST00000536872 C22orf24Q9Y442 160 aa11.93□□□□□ -0.5
COPS7A-205ENST00000536872 TSPEAR-AS2P59090 65 aa11.92□□□□□ -0.5
COPS7A-205ENST00000536872 COX17Q14061 63 aa11.92□□□□□ -0.5
COPS7A-205ENST00000536872 MEIG1Q5JSS6 88 aa11.92□□□□□ -0.5
COPS7A-205ENST00000536872 LINC01545Q5VT33 79 aa11.92□□□□□ -0.5
COPS7A-205ENST00000536872 KRTAP11-1Q8IUC1 163 aa11.92□□□□□ -0.5
COPS7A-205ENST00000536872 MYMXA0A1B0GTQ4 84 aa11.91□□□□□ -0.5
COPS7A-205ENST00000536872 C1orf137Q5JT78 98 aa11.91□□□□□ -0.5
COPS7A-205ENST00000536872 SND1-IT1Q9HBX3 110 aa11.91□□□□□ -0.5
COPS7A-205ENST00000536872 J3QQQ9 107 aa11.9□□□□□ -0.5
COPS7A-205ENST00000536872 SMIM13P0DJ93 91 aa11.9□□□□□ -0.5
COPS7A-205ENST00000536872 LGALS3P17931 250 aaKnown RBP11.9□□□□□ -0.5
COPS7A-205ENST00000536872 S100A6P06703 90 aa11.89□□□□□ -0.51
COPS7A-205ENST00000536872 LBHQ53QV2 105 aaPredicted RBP11.89□□□□□ -0.51
COPS7A-205ENST00000536872 DMBT1Q9UGM3 2413 aaPredicted RBP11.88□□□□□ -0.51
COPS7A-205ENST00000536872 GAGE10A6NGK3 116 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms