RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 LINC00167Q96N53 147 aa11□□□□□ -0.65
CHFR-213ENST00000536843 TEX15Q9BXT5 2789 aa11□□□□□ -0.65
CHFR-213ENST00000536843 JMJD7-PLA2G4BH0Y9G9 81 aa11□□□□□ -0.65
CHFR-213ENST00000536843 DEFB131AP59861 70 aa11□□□□□ -0.65
CHFR-213ENST00000536843 WFDC9Q8NEX5 89 aa11□□□□□ -0.65
CHFR-213ENST00000536843 ENHOQ6UWT2 76 aa10.99□□□□□ -0.65
CHFR-213ENST00000536843 GCN1Q92616 2671 aaKnown RBP10.99□□□□□ -0.65
CHFR-213ENST00000536843 LY6G6DO95868 133 aa10.98□□□□□ -0.65
CHFR-213ENST00000536843 KHDC1LQ5JSQ8 128 aa10.98□□□□□ -0.65
CHFR-213ENST00000536843 LINC00158P58513 81 aa10.98□□□□□ -0.65
CHFR-213ENST00000536843 NTM-AS1Q6ZSK4 140 aa10.98□□□□□ -0.65
CHFR-213ENST00000536843 TRAV7A0A075B6U4 112 aa10.96□□□□□ -0.65
CHFR-213ENST00000536843 IBA57-AS1B1ANH7 110 aa10.96□□□□□ -0.65
CHFR-213ENST00000536843 C4orf3Q8WVX3 66 aa10.96□□□□□ -0.66
CHFR-213ENST00000536843 CUBNO60494 3623 aa10.95□□□□□ -0.66
CHFR-213ENST00000536843 KLKP1Q107X0 134 aa10.95□□□□□ -0.66
CHFR-213ENST00000536843 TLN2Q9Y4G6 2542 aa10.95□□□□□ -0.66
CHFR-213ENST00000536843 TRBV6-4A0A1B0GX49 114 aa10.95□□□□□ -0.66
CHFR-213ENST00000536843 UBL5Q9BZL1 73 aa10.95□□□□□ -0.66
CHFR-213ENST00000536843 C16orf95Q9H693 158 aa10.95□□□□□ -0.66
CHFR-213ENST00000536843 TRBV10-1A0A0K0K1A3 114 aa10.94□□□□□ -0.66
CHFR-213ENST00000536843 WFDC11Q8NEX6 87 aa10.94□□□□□ -0.66
CHFR-213ENST00000536843 ZNF469Q96JG9 3925 aaPredicted RBP10.93□□□□□ -0.66
CHFR-213ENST00000536843 UNC79Q9P2D8 2635 aa10.93□□□□□ -0.66
CHFR-213ENST00000536843 SMIM26A0A096LP01 95 aa10.93□□□□□ -0.66
CHFR-213ENST00000536843 K7EQD1 137 aa10.93□□□□□ -0.66
CHFR-213ENST00000536843 MYO9AB2RTY4 2548 aa10.93□□□□□ -0.66
CHFR-213ENST00000536843 NBPF19A0A087WUL8 3843 aa10.93□□□□□ -0.66
CHFR-213ENST00000536843 TMEM256-PLSCR3K7ERE1 68 aa10.93□□□□□ -0.66
CHFR-213ENST00000536843 PAX4O43316 350 aa10.93□□□□□ -0.66
CHFR-213ENST00000536843 DYNLRB2Q8TF09 96 aa10.93□□□□□ -0.66
CHFR-213ENST00000536843 TOMM7Q9P0U1 55 aa10.93□□□□□ -0.66
CHFR-213ENST00000536843 MAP6D1Q9H9H5 199 aa10.92□□□□□ -0.66
CHFR-213ENST00000536843 DEFB114Q30KQ6 69 aa10.92□□□□□ -0.66
CHFR-213ENST00000536843 AKAP9Q99996 3911 aa10.91□□□□□ -0.66
CHFR-213ENST00000536843 FP248Q71RG6 208 aaPredicted RBP10.91□□□□□ -0.66
CHFR-213ENST00000536843 Q8N814 137 aa10.9□□□□□ -0.66
CHFR-213ENST00000536843 C1orf43Q9BWL3 253 aa10.9□□□□□ -0.66
CHFR-213ENST00000536843 PDZD2O15018 2839 aa10.9□□□□□ -0.66
CHFR-213ENST00000536843 F8WDY8 70 aa10.9□□□□□ -0.66
CHFR-213ENST00000536843 C11orf44Q8N8P7 122 aa10.9□□□□□ -0.66
CHFR-213ENST00000536843 SONP18583 2426 aaKnown RBP10.89□□□□□ -0.67
CHFR-213ENST00000536843 TMEM86BQ8N661 226 aa10.89□□□□□ -0.67
CHFR-213ENST00000536843 DNAJC9-AS1A6NH13 148 aa10.89□□□□□ -0.67
CHFR-213ENST00000536843 UBE2L6O14933 153 aa10.89□□□□□ -0.67
CHFR-213ENST00000536843 FASNP49327 2511 aaKnown RBP10.89□□□□□ -0.67
CHFR-213ENST00000536843 ITPR3Q14573 2671 aa10.88□□□□□ -0.67
CHFR-213ENST00000536843 INSP01308 110 aa10.88□□□□□ -0.67
CHFR-213ENST00000536843 ITPR2Q14571 2701 aa10.88□□□□□ -0.67
CHFR-213ENST00000536843 A0A1W2PRX2 142 aa10.88□□□□□ -0.67
CHFR-213ENST00000536843 LINC00482Q8N8I6 264 aa10.88□□□□□ -0.67
CHFR-213ENST00000536843 IL17DQ8TAD2 202 aa10.88□□□□□ -0.67
CHFR-213ENST00000536843 ESM1Q9NQ30 184 aa10.87□□□□□ -0.67
CHFR-213ENST00000536843 IGHV3OR16-9A0A0B4J2B5 98 aa10.87□□□□□ -0.67
CHFR-213ENST00000536843 CCDC168Q8NDH2 2452 aa10.87□□□□□ -0.67
CHFR-213ENST00000536843 RPL35AP18077 110 aaKnown RBP10.86□□□□□ -0.67
CHFR-213ENST00000536843 HECTD1Q9ULT8 2610 aa10.85□□□□□ -0.67
CHFR-213ENST00000536843 NANOS2P60321 138 aaKnown RBP10.85□□□□□ -0.67
CHFR-213ENST00000536843 A0A087WZ39 114 aa10.85□□□□□ -0.67
CHFR-213ENST00000536843 TRGV1A0A0A0MS02 117 aa10.85□□□□□ -0.67
CHFR-213ENST00000536843 F8WEM9 126 aa10.84□□□□□ -0.67
CHFR-213ENST00000536843 NDUFC1O43677 76 aa10.84□□□□□ -0.67
CHFR-213ENST00000536843 ODF3L2Q3SX64 289 aa10.84□□□□□ -0.67
CHFR-213ENST00000536843 Q6ZQT0 140 aa10.84□□□□□ -0.67
CHFR-213ENST00000536843 RMI2Q96E14 147 aa10.84□□□□□ -0.67
CHFR-213ENST00000536843 ATP5EP56381 51 aaPredicted RBP10.83□□□□□ -0.68
CHFR-213ENST00000536843 Q6ZTI0 123 aa10.83□□□□□ -0.68
CHFR-213ENST00000536843 LOC110117498A0A087WWA1 95 aa10.83□□□□□ -0.68
CHFR-213ENST00000536843 CCL24O00175 119 aa10.83□□□□□ -0.68
CHFR-213ENST00000536843 LINC01547P58512 204 aaPredicted RBP10.83□□□□□ -0.68
CHFR-213ENST00000536843 SNURFQ9Y675 71 aa10.83□□□□□ -0.68
CHFR-213ENST00000536843 TRAV10A0A0B4J240 114 aa10.82□□□□□ -0.68
CHFR-213ENST00000536843 PKIGQ9Y2B9 76 aa10.82□□□□□ -0.68
CHFR-213ENST00000536843 TRBV7-6A0A0J9YX20 115 aa10.81□□□□□ -0.68
CHFR-213ENST00000536843 FLNAP21333 2647 aaKnown RBP10.8□□□□□ -0.68
CHFR-213ENST00000536843 KRTAP1-1Q07627 177 aa10.8□□□□□ -0.68
CHFR-213ENST00000536843 SETD2Q9BYW2 2564 aaPredicted RBP10.8□□□□□ -0.68
CHFR-213ENST00000536843 NF1P21359 2839 aa10.79□□□□□ -0.68
CHFR-213ENST00000536843 STHQ8IWL8 128 aa10.79□□□□□ -0.68
CHFR-213ENST00000536843 IGKV3OR2-268A0A0C4DH90 116 aa10.79□□□□□ -0.68
CHFR-213ENST00000536843 CXCL6P80162 114 aa10.79□□□□□ -0.68
CHFR-213ENST00000536843 RBM3P98179 157 aaKnown RBP10.79□□□□□ -0.68
CHFR-213ENST00000536843 WNK1Q9H4A3 2382 aa10.79□□□□□ -0.68
CHFR-213ENST00000536843 Q6ZVQ6 151 aa10.78□□□□□ -0.68
CHFR-213ENST00000536843 C1orf158Q8N1D5 194 aa10.78□□□□□ -0.68
CHFR-213ENST00000536843 IGLV4-60A0A075B6I1 120 aa10.78□□□□□ -0.68
CHFR-213ENST00000536843 C6orf226Q5I0X4 101 aa10.77□□□□□ -0.68
CHFR-213ENST00000536843 LINC00474Q9P2X8 69 aa10.77□□□□□ -0.68
CHFR-213ENST00000536843 ZNF561-AS1K7EIQ3 104 aa10.77□□□□□ -0.69
CHFR-213ENST00000536843 C6orf223Q8N319 242 aa10.77□□□□□ -0.69
CHFR-213ENST00000536843 LINC01006Q8NI28 216 aa10.77□□□□□ -0.69
CHFR-213ENST00000536843 ANK3Q12955 4377 aaKnown RBP10.77□□□□□ -0.69
CHFR-213ENST00000536843 TRBV7-4A0A0J9YYF1 115 aa10.76□□□□□ -0.69
CHFR-213ENST00000536843 HAMPP81172 84 aa10.76□□□□□ -0.69
CHFR-213ENST00000536843 ACANP16112 2415 aa10.75□□□□□ -0.69
CHFR-213ENST00000536843 RNASE1P07998 156 aaKnown RBP10.75□□□□□ -0.69
CHFR-213ENST00000536843 M0R2N4 97 aa10.74□□□□□ -0.69
CHFR-213ENST00000536843 LINC00575Q6W349 94 aa10.74□□□□□ -0.69
CHFR-213ENST00000536843 PRR3P79522 188 aaKnown RBP10.74□□□□□ -0.69
CHFR-213ENST00000536843 Q8IZM0 81 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms