RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 Q6ZRU5 148 aa8.69□□□□□ -1.02
RPAIN-205ENST00000536255 Q8IZM0 81 aa8.69□□□□□ -1.02
RPAIN-205ENST00000536255 MRPL35Q9NZE8 188 aaKnown RBP8.69□□□□□ -1.02
RPAIN-205ENST00000536255 TOMM7Q9P0U1 55 aa8.69□□□□□ -1.02
RPAIN-205ENST00000536255 FABP4P15090 132 aa8.68□□□□□ -1.02
RPAIN-205ENST00000536255 KIAA0087Q14695 138 aa8.68□□□□□ -1.02
RPAIN-205ENST00000536255 LINC00474Q9P2X8 69 aa8.68□□□□□ -1.02
RPAIN-205ENST00000536255 LOC107984640A0A0U1RRK4 108 aa8.67□□□□□ -1.02
RPAIN-205ENST00000536255 SMIM1B2RUZ4 78 aa8.67□□□□□ -1.02
RPAIN-205ENST00000536255 F8VRH5 84 aa8.67□□□□□ -1.02
RPAIN-205ENST00000536255 CXCL5P42830 114 aa8.67□□□□□ -1.02
RPAIN-205ENST00000536255 CKS1BP61024 79 aa8.67□□□□□ -1.02
RPAIN-205ENST00000536255 COA6Q5JTJ3 125 aaKnown RBP8.67□□□□□ -1.02
RPAIN-205ENST00000536255 TRBV30A0A0K0K1B3 111 aa8.66□□□□□ -1.02
RPAIN-205ENST00000536255 H0Y8G0 127 aa8.66□□□□□ -1.02
RPAIN-205ENST00000536255 SPINK8P0C7L1 97 aa8.66□□□□□ -1.02
RPAIN-205ENST00000536255 ZNF22P17026 224 aaPredicted RBP8.66□□□□□ -1.02
RPAIN-205ENST00000536255 TMEM170BQ5T4T1 132 aa8.66□□□□□ -1.02
RPAIN-205ENST00000536255 CIRBP-AS1Q8TBR5 109 aa8.66□□□□□ -1.02
RPAIN-205ENST00000536255 DPH3Q96FX2 82 aa8.66□□□□□ -1.02
RPAIN-205ENST00000536255 MAP1LC3CQ9BXW4 147 aa8.66□□□□□ -1.02
RPAIN-205ENST00000536255 VPS13BQ7Z7G8 4022 aa8.65□□□□□ -1.02
RPAIN-205ENST00000536255 C11orf86A6NJI1 115 aa8.65□□□□□ -1.02
RPAIN-205ENST00000536255 UNQ6190/PRO20217Q6UXQ8 127 aa8.65□□□□□ -1.02
RPAIN-205ENST00000536255 LINC00528Q8N1L1 170 aa8.65□□□□□ -1.02
RPAIN-205ENST00000536255 COX7B2Q8TF08 81 aa8.65□□□□□ -1.02
RPAIN-205ENST00000536255 IGKV2-24A0A0C4DH68 120 aa8.64□□□□□ -1.03
RPAIN-205ENST00000536255 CIRBPQ14011 172 aaKnown RBP8.64□□□□□ -1.03
RPAIN-205ENST00000536255 C2orf82Q6UX34 121 aa8.64□□□□□ -1.03
RPAIN-205ENST00000536255 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.64□□□□□ -1.03
RPAIN-205ENST00000536255 PANO1I0J062 215 aa8.63□□□□□ -1.03
RPAIN-205ENST00000536255 INAFM2P0DMQ5 153 aa8.63□□□□□ -1.03
RPAIN-205ENST00000536255 RPL18AQ02543 176 aaKnown RBP8.63□□□□□ -1.03
RPAIN-205ENST00000536255 ODF1Q14990 250 aa8.63□□□□□ -1.03
RPAIN-205ENST00000536255 C10orf25Q5T742 122 aa8.63□□□□□ -1.03
RPAIN-205ENST00000536255 SPACA4Q8TDM5 124 aa8.63□□□□□ -1.03
RPAIN-205ENST00000536255 C6orf48Q9UBA6 75 aa8.63□□□□□ -1.03
RPAIN-205ENST00000536255 A0A096LNI7 61 aa8.62□□□□□ -1.03
RPAIN-205ENST00000536255 IGLV5-39A0A0G2JS06 123 aa8.62□□□□□ -1.03
RPAIN-205ENST00000536255 TLX1NBP0CAT3 122 aa8.62□□□□□ -1.03
RPAIN-205ENST00000536255 CHTF8P0CG12 524 aa8.62□□□□□ -1.03
RPAIN-205ENST00000536255 PLNP26678 52 aa8.62□□□□□ -1.03
RPAIN-205ENST00000536255 PTTG1IPP53801 180 aa8.62□□□□□ -1.03
RPAIN-205ENST00000536255 GAGE2BQ13066 116 aa8.62□□□□□ -1.03
RPAIN-205ENST00000536255 MAJINQ3KP22 176 aa8.62□□□□□ -1.03
RPAIN-205ENST00000536255 SRRM2Q9UQ35 2752 aaKnown RBP8.61□□□□□ -1.03
RPAIN-205ENST00000536255 PLA2G1BP04054 148 aaKnown RBP8.61□□□□□ -1.03
RPAIN-205ENST00000536255 A0A087WYN8 130 aa8.6□□□□□ -1.03
RPAIN-205ENST00000536255 DPM2O94777 84 aa8.6□□□□□ -1.03
RPAIN-205ENST00000536255 SFTA2Q6UW10 78 aa8.6□□□□□ -1.03
RPAIN-205ENST00000536255 TMEM223A0PJW6 202 aa8.59□□□□□ -1.03
RPAIN-205ENST00000536255 NDUFC2-KCTD14E9PQ53 114 aa8.59□□□□□ -1.03
RPAIN-205ENST00000536255 SYS1-DBNDD2H3BUS1 97 aa8.59□□□□□ -1.03
RPAIN-205ENST00000536255 S100A6P06703 90 aa8.59□□□□□ -1.03
RPAIN-205ENST00000536255 STPG4Q8N801 248 aa8.59□□□□□ -1.03
RPAIN-205ENST00000536255 IGKCP01834 107 aa8.58□□□□□ -1.04
RPAIN-205ENST00000536255 PET117Q6UWS5 81 aa8.58□□□□□ -1.04
RPAIN-205ENST00000536255 PLAC8Q9NZF1 115 aa8.58□□□□□ -1.04
RPAIN-205ENST00000536255 HERVK_113P61574 105 aa8.57□□□□□ -1.04
RPAIN-205ENST00000536255 C9orf116Q5BN46 136 aaPredicted RBP8.57□□□□□ -1.04
RPAIN-205ENST00000536255 Q6ZRP5 223 aa8.57□□□□□ -1.04
RPAIN-205ENST00000536255 S100A2P29034 98 aa8.56□□□□□ -1.04
RPAIN-205ENST00000536255 GAGE2EQ4V326 116 aa8.56□□□□□ -1.04
RPAIN-205ENST00000536255 PMCHL2Q9BQD1 86 aa8.56□□□□□ -1.04
RPAIN-205ENST00000536255 GAGE2DQ9UEU5 116 aa8.56□□□□□ -1.04
RPAIN-205ENST00000536255 C3orf79P0CE67 100 aa8.55□□□□□ -1.04
RPAIN-205ENST00000536255 KRTAP10-4P60372 401 aaPredicted RBP8.55□□□□□ -1.04
RPAIN-205ENST00000536255 KRTDAPP60985 99 aa8.55□□□□□ -1.04
RPAIN-205ENST00000536255 MYCBP2O75592 4640 aa8.54□□□□□ -1.04
RPAIN-205ENST00000536255 C20orf202A1L168 122 aa8.54□□□□□ -1.04
RPAIN-205ENST00000536255 LINC01545Q5VT33 79 aa8.54□□□□□ -1.04
RPAIN-205ENST00000536255 C7orf33Q8WU49 177 aa8.54□□□□□ -1.04
RPAIN-205ENST00000536255 AKR1D1P51857 326 aa8.53□□□□□ -1.04
RPAIN-205ENST00000536255 RPL37AP61513 92 aaKnown RBP8.53□□□□□ -1.04
RPAIN-205ENST00000536255 COX17Q14061 63 aa8.53□□□□□ -1.04
RPAIN-205ENST00000536255 HIST3H2BBQ8N257 126 aa8.53□□□□□ -1.04
RPAIN-205ENST00000536255 PLEKHB2Q96CS7 222 aa8.53□□□□□ -1.04
RPAIN-205ENST00000536255 LEPROTO15243 131 aa8.52□□□□□ -1.05
RPAIN-205ENST00000536255 ZNF625Q96I27 306 aaPredicted RBP8.52□□□□□ -1.05
RPAIN-205ENST00000536255 MYMXA0A1B0GTQ4 84 aa8.51□□□□□ -1.05
RPAIN-205ENST00000536255 HERV-K104P63124 156 aa8.51□□□□□ -1.05
RPAIN-205ENST00000536255 ERG28Q9UKR5 140 aa8.51□□□□□ -1.05
RPAIN-205ENST00000536255 FLG2Q5D862 2391 aaPredicted RBP8.51□□□□□ -1.05
RPAIN-205ENST00000536255 A0A1W2PNN7 141 aa8.5□□□□□ -1.05
RPAIN-205ENST00000536255 LINC00587B1AMM8 73 aa8.5□□□□□ -1.05
RPAIN-205ENST00000536255 PFN2P35080 140 aa8.5□□□□□ -1.05
RPAIN-205ENST00000536255 HIST1H2BLQ99880 126 aa8.5□□□□□ -1.05
RPAIN-205ENST00000536255 NDUFA12Q9UI09 145 aa8.5□□□□□ -1.05
RPAIN-205ENST00000536255 J3QQQ9 107 aa8.49□□□□□ -1.05
RPAIN-205ENST00000536255 LGALS3P17931 250 aaKnown RBP8.49□□□□□ -1.05
RPAIN-205ENST00000536255 NMUP48645 174 aa8.49□□□□□ -1.05
RPAIN-205ENST00000536255 SNRPEP62304 92 aaKnown RBP8.49□□□□□ -1.05
RPAIN-205ENST00000536255 C9orf129Q5T035 196 aaKnown RBP8.49□□□□□ -1.05
RPAIN-205ENST00000536255 XAGE1AQ9HD64 81 aa8.49□□□□□ -1.05
RPAIN-205ENST00000536255 E9PLD3 99 aa8.48□□□□□ -1.05
RPAIN-205ENST00000536255 FAM19A5Q7Z5A7 132 aaPredicted RBP8.48□□□□□ -1.05
RPAIN-205ENST00000536255 FAM168BA1KXE4 195 aa8.47□□□□□ -1.05
RPAIN-205ENST00000536255 LINC00158P58513 81 aa8.47□□□□□ -1.05
RPAIN-205ENST00000536255 MEIG1Q5JSS6 88 aa8.47□□□□□ -1.05
RPAIN-205ENST00000536255 C5orf52A6NGY3 159 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms