RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 HNRNPA3P51991 378 aaKnown RBP10.41□□□□□ -0.74
ATL3-202ENST00000535789 CD164L2Q6UWJ8 174 aa10.41□□□□□ -0.74
ATL3-202ENST00000535789 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.4□□□□□ -0.74
ATL3-202ENST00000535789 C20orf202A1L168 122 aa10.4□□□□□ -0.74
ATL3-202ENST00000535789 JOSD1Q15040 202 aaPredicted RBP10.4□□□□□ -0.74
ATL3-202ENST00000535789 SS18Q15532 418 aa10.4□□□□□ -0.74
ATL3-202ENST00000535789 LINC00242Q5T6M2 205 aa10.4□□□□□ -0.74
ATL3-202ENST00000535789 CFAP161Q6P656 301 aa10.4□□□□□ -0.74
ATL3-202ENST00000535789 TINCRA0A1B0GVN0 87 aa10.39□□□□□ -0.75
ATL3-202ENST00000535789 C11orf86A6NJI1 115 aa10.39□□□□□ -0.75
ATL3-202ENST00000535789 COX6A2Q02221 97 aa10.39□□□□□ -0.75
ATL3-202ENST00000535789 PYY3Q5JQD4 70 aa10.39□□□□□ -0.75
ATL3-202ENST00000535789 A0A087WYN8 130 aa10.38□□□□□ -0.75
ATL3-202ENST00000535789 IGHV1-58A0A0C4DH39 117 aa10.38□□□□□ -0.75
ATL3-202ENST00000535789 DPM2O94777 84 aa10.38□□□□□ -0.75
ATL3-202ENST00000535789 IGLV5-45A0A087WSX0 123 aa10.37□□□□□ -0.75
ATL3-202ENST00000535789 SCGB1D1O95968 90 aa10.37□□□□□ -0.75
ATL3-202ENST00000535789 IGKCP01834 107 aa10.37□□□□□ -0.75
ATL3-202ENST00000535789 PLNP26678 52 aa10.37□□□□□ -0.75
ATL3-202ENST00000535789 A0A096LNI7 61 aa10.36□□□□□ -0.75
ATL3-202ENST00000535789 ZNF22P17026 224 aaPredicted RBP10.36□□□□□ -0.75
ATL3-202ENST00000535789 RPL37AP61513 92 aaKnown RBP10.36□□□□□ -0.75
ATL3-202ENST00000535789 HERVK_113P63121 156 aa10.36□□□□□ -0.75
ATL3-202ENST00000535789 SEC11AP67812 179 aa10.36□□□□□ -0.75
ATL3-202ENST00000535789 IGHV3OR16-9A0A0B4J2B5 98 aa10.35□□□□□ -0.75
ATL3-202ENST00000535789 ATOH7Q8N100 152 aa10.35□□□□□ -0.75
ATL3-202ENST00000535789 GEMIN7Q9H840 131 aaKnown RBP10.35□□□□□ -0.75
ATL3-202ENST00000535789 PLAC8Q9NZF1 115 aa10.35□□□□□ -0.75
ATL3-202ENST00000535789 IGKV2-24A0A0C4DH68 120 aa10.34□□□□□ -0.75
ATL3-202ENST00000535789 COX7A2LO14548 114 aa10.34□□□□□ -0.75
ATL3-202ENST00000535789 C5orf38Q86SI9 138 aa10.34□□□□□ -0.75
ATL3-202ENST00000535789 LINC00469Q8N7U9 141 aa10.34□□□□□ -0.75
ATL3-202ENST00000535789 CARD19Q96LW7 228 aa10.34□□□□□ -0.75
ATL3-202ENST00000535789 CDKN2A-AS1Q9UH64 79 aa10.34□□□□□ -0.75
ATL3-202ENST00000535789 Q6ZRU5 148 aa10.33□□□□□ -0.76
ATL3-202ENST00000535789 TMEM170BQ5T4T1 132 aa10.32□□□□□ -0.76
ATL3-202ENST00000535789 A0A087WZ39 114 aa10.31□□□□□ -0.76
ATL3-202ENST00000535789 KRTAP29-1A8MX34 341 aaPredicted RBP10.31□□□□□ -0.76
ATL3-202ENST00000535789 SMIM6P0DI80 62 aa10.31□□□□□ -0.76
ATL3-202ENST00000535789 SYCNQ0VAF6 134 aa10.31□□□□□ -0.76
ATL3-202ENST00000535789 TMEM223A0PJW6 202 aa10.3□□□□□ -0.76
ATL3-202ENST00000535789 ZNF561-AS1K7EIQ3 104 aa10.3□□□□□ -0.76
ATL3-202ENST00000535789 MAJINQ3KP22 176 aa10.3□□□□□ -0.76
ATL3-202ENST00000535789 SMIM1B2RUZ4 78 aa10.29□□□□□ -0.76
ATL3-202ENST00000535789 H3BRM9 83 aa10.29□□□□□ -0.76
ATL3-202ENST00000535789 SPINK8P0C7L1 97 aa10.29□□□□□ -0.76
ATL3-202ENST00000535789 MALP21145 153 aa10.29□□□□□ -0.76
ATL3-202ENST00000535789 LINC01561Q8N1V8 128 aa10.29□□□□□ -0.76
ATL3-202ENST00000535789 STPG4Q8N801 248 aa10.29□□□□□ -0.76
ATL3-202ENST00000535789 IGLV5-39A0A0G2JS06 123 aa10.28□□□□□ -0.76
ATL3-202ENST00000535789 SPAG11BQ08648 103 aa10.28□□□□□ -0.76
ATL3-202ENST00000535789 TNXBP22105 4242 aa10.28□□□□□ -0.76
ATL3-202ENST00000535789 ANKRD39Q53RE8 183 aa10.27□□□□□ -0.77
ATL3-202ENST00000535789 ORAOV1Q8WV07 137 aa10.26□□□□□ -0.77
ATL3-202ENST00000535789 C2orf48Q96LS8 159 aa10.26□□□□□ -0.77
ATL3-202ENST00000535789 CAMK2N2Q96S95 79 aa10.26□□□□□ -0.77
ATL3-202ENST00000535789 E9PLD3 99 aa10.25□□□□□ -0.77
ATL3-202ENST00000535789 PTTG1IPP53801 180 aa10.25□□□□□ -0.77
ATL3-202ENST00000535789 HERVK_113P61574 105 aa10.25□□□□□ -0.77
ATL3-202ENST00000535789 C10orf25Q5T742 122 aa10.25□□□□□ -0.77
ATL3-202ENST00000535789 DPH3Q96FX2 82 aa10.25□□□□□ -0.77
ATL3-202ENST00000535789 VAMP8Q9BV40 100 aa10.25□□□□□ -0.77
ATL3-202ENST00000535789 IGKV2D-26A0A0A0MRZ7 120 aa10.24□□□□□ -0.77
ATL3-202ENST00000535789 J3QL48 77 aa10.24□□□□□ -0.77
ATL3-202ENST00000535789 KIAA0087Q14695 138 aa10.24□□□□□ -0.77
ATL3-202ENST00000535789 HSBP1L1C9JCN9 74 aa10.23□□□□□ -0.77
ATL3-202ENST00000535789 LEPROTO15243 131 aa10.23□□□□□ -0.77
ATL3-202ENST00000535789 APOMO95445 188 aa10.23□□□□□ -0.77
ATL3-202ENST00000535789 TSPEAR-AS2P59090 65 aa10.23□□□□□ -0.77
ATL3-202ENST00000535789 PAM16Q9Y3D7 125 aa10.23□□□□□ -0.77
ATL3-202ENST00000535789 HMCN2Q8NDA2 5059 aa10.23□□□□□ -0.77
ATL3-202ENST00000535789 LOC107984640A0A0U1RRK4 108 aa10.22□□□□□ -0.77
ATL3-202ENST00000535789 PRR3P79522 188 aaKnown RBP10.22□□□□□ -0.77
ATL3-202ENST00000535789 GAGE2BQ13066 116 aa10.22□□□□□ -0.77
ATL3-202ENST00000535789 SPATA45Q537H7 98 aa10.22□□□□□ -0.77
ATL3-202ENST00000535789 A0A1W2PNN7 141 aa10.21□□□□□ -0.77
ATL3-202ENST00000535789 LINC00518Q8N0U6 118 aa10.21□□□□□ -0.77
ATL3-202ENST00000535789 PLEKHB2Q96CS7 222 aa10.21□□□□□ -0.77
ATL3-202ENST00000535789 C12orf57Q99622 126 aa10.21□□□□□ -0.77
ATL3-202ENST00000535789 C6orf48Q9UBA6 75 aa10.21□□□□□ -0.77
ATL3-202ENST00000535789 OXTP01178 125 aa10.2□□□□□ -0.78
ATL3-202ENST00000535789 UNQ6190/PRO20217Q6UXQ8 127 aa10.2□□□□□ -0.78
ATL3-202ENST00000535789 Q8IZM0 81 aa10.2□□□□□ -0.78
ATL3-202ENST00000535789 COX7B2Q8TF08 81 aa10.2□□□□□ -0.78
ATL3-202ENST00000535789 LINC00474Q9P2X8 69 aa10.2□□□□□ -0.78
ATL3-202ENST00000535789 J3QQQ9 107 aa10.19□□□□□ -0.78
ATL3-202ENST00000535789 MT1HL1P0DM35 61 aa10.19□□□□□ -0.78
ATL3-202ENST00000535789 S100A12P80511 92 aa10.19□□□□□ -0.78
ATL3-202ENST00000535789 RPL18AQ02543 176 aaKnown RBP10.19□□□□□ -0.78
ATL3-202ENST00000535789 RNF151Q2KHN1 245 aa10.19□□□□□ -0.78
ATL3-202ENST00000535789 C7orf33Q8WU49 177 aa10.19□□□□□ -0.78
ATL3-202ENST00000535789 PKIGQ9Y2B9 76 aa10.19□□□□□ -0.78
ATL3-202ENST00000535789 NMUP48645 174 aa10.18□□□□□ -0.78
ATL3-202ENST00000535789 C2orf82Q6UX34 121 aa10.18□□□□□ -0.78
ATL3-202ENST00000535789 TTTY13Q9BZ97 58 aa10.18□□□□□ -0.78
ATL3-202ENST00000535789 TOMM7Q9P0U1 55 aa10.18□□□□□ -0.78
ATL3-202ENST00000535789 NDUFA1O15239 70 aa10.17□□□□□ -0.78
ATL3-202ENST00000535789 Q6ZRP5 223 aa10.17□□□□□ -0.78
ATL3-202ENST00000535789 PCP2Q8IVA1 136 aa10.17□□□□□ -0.78
ATL3-202ENST00000535789 LGALS3P17931 250 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms