RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 Q6ZUT4 128 aa12.69□□□□□ -0.38
LTBR-205ENST00000535739 TMEM141Q96I45 108 aa12.69□□□□□ -0.38
LTBR-205ENST00000535739 TIMM17AQ99595 171 aa12.69□□□□□ -0.38
LTBR-205ENST00000535739 C5orf52A6NGY3 159 aa12.68□□□□□ -0.38
LTBR-205ENST00000535739 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.68□□□□□ -0.38
LTBR-205ENST00000535739 APOMO95445 188 aa12.68□□□□□ -0.38
LTBR-205ENST00000535739 NPSP0C0P6 89 aa12.68□□□□□ -0.38
LTBR-205ENST00000535739 OPRPNQ99935 248 aaPredicted RBP12.68□□□□□ -0.38
LTBR-205ENST00000535739 ATP5LO75964 103 aa12.67□□□□□ -0.38
LTBR-205ENST00000535739 LEPROTL1O95214 131 aa12.67□□□□□ -0.38
LTBR-205ENST00000535739 MRPS36P82909 103 aaKnown RBP12.67□□□□□ -0.38
LTBR-205ENST00000535739 C9orf116Q5BN46 136 aaPredicted RBP12.67□□□□□ -0.38
LTBR-205ENST00000535739 HIST3H2BBQ8N257 126 aa12.67□□□□□ -0.38
LTBR-205ENST00000535739 FAM104AQ969W3 186 aa12.67□□□□□ -0.38
LTBR-205ENST00000535739 C2orf48Q96LS8 159 aa12.67□□□□□ -0.38
LTBR-205ENST00000535739 IGLV4-3A0A075B6K6 122 aa12.66□□□□□ -0.38
LTBR-205ENST00000535739 FABP4P15090 132 aa12.66□□□□□ -0.38
LTBR-205ENST00000535739 RPL18AQ02543 176 aaKnown RBP12.66□□□□□ -0.38
LTBR-205ENST00000535739 PSORS1C2Q9UIG4 136 aa12.66□□□□□ -0.38
LTBR-205ENST00000535739 HSPB8Q9UJY1 196 aa12.66□□□□□ -0.38
LTBR-205ENST00000535739 S100A2P29034 98 aa12.65□□□□□ -0.38
LTBR-205ENST00000535739 SPAG11BQ08648 103 aa12.65□□□□□ -0.38
LTBR-205ENST00000535739 PACRGQ96M98 296 aaPredicted RBP12.65□□□□□ -0.38
LTBR-205ENST00000535739 PAPPA-AS1Q5QFB9 102 aa12.64□□□□□ -0.39
LTBR-205ENST00000535739 Q6ZN92 141 aa12.64□□□□□ -0.39
LTBR-205ENST00000535739 LINC00173Q6ZV60 143 aa12.64□□□□□ -0.39
LTBR-205ENST00000535739 IFI27L1Q96BM0 104 aa12.64□□□□□ -0.39
LTBR-205ENST00000535739 VCX2Q9H322 139 aa12.64□□□□□ -0.39
LTBR-205ENST00000535739 PHF5AQ7RTV0 110 aaKnown RBP12.63□□□□□ -0.39
LTBR-205ENST00000535739 AMELXQ99217 191 aa12.62□□□□□ -0.39
LTBR-205ENST00000535739 RNF151Q2KHN1 245 aa12.61□□□□□ -0.39
LTBR-205ENST00000535739 ZC2HC1BQ5TFG8 222 aa12.61□□□□□ -0.39
LTBR-205ENST00000535739 TEX43Q6ZNM6 134 aa12.61□□□□□ -0.39
LTBR-205ENST00000535739 OR10D4PQ8NGN7 298 aa12.61□□□□□ -0.39
LTBR-205ENST00000535739 HIST1H2BLQ99880 126 aa12.61□□□□□ -0.39
LTBR-205ENST00000535739 IFITM10A6NMD0 228 aa12.6□□□□□ -0.39
LTBR-205ENST00000535739 C1orf137Q5JT78 98 aa12.6□□□□□ -0.39
LTBR-205ENST00000535739 ORAOV1Q8WV07 137 aa12.6□□□□□ -0.39
LTBR-205ENST00000535739 CST9LQ9H4G1 147 aa12.6□□□□□ -0.39
LTBR-205ENST00000535739 PMVKQ15126 192 aa12.59□□□□□ -0.39
LTBR-205ENST00000535739 C2orf88Q9BSF0 95 aa12.59□□□□□ -0.39
LTBR-205ENST00000535739 MAP1LC3CQ9BXW4 147 aa12.59□□□□□ -0.39
LTBR-205ENST00000535739 IGHV3OR16-9A0A0B4J2B5 98 aa12.58□□□□□ -0.4
LTBR-205ENST00000535739 C10orf25Q5T742 122 aa12.57□□□□□ -0.4
LTBR-205ENST00000535739 MRPL35Q9NZE8 188 aaKnown RBP12.57□□□□□ -0.4
LTBR-205ENST00000535739 LPAP08519 4548 aa12.56□□□□□ -0.4
LTBR-205ENST00000535739 FAM168BA1KXE4 195 aa12.56□□□□□ -0.4
LTBR-205ENST00000535739 TRAV12-1A0A0B4J245 112 aa12.55□□□□□ -0.4
LTBR-205ENST00000535739 NDUFA1O15239 70 aa12.55□□□□□ -0.4
LTBR-205ENST00000535739 F8WDY8 70 aa12.54□□□□□ -0.4
LTBR-205ENST00000535739 H0Y8G0 127 aa12.54□□□□□ -0.4
LTBR-205ENST00000535739 SYS1-DBNDD2H3BUS1 97 aa12.54□□□□□ -0.4
LTBR-205ENST00000535739 C3orf79P0CE67 100 aa12.54□□□□□ -0.4
LTBR-205ENST00000535739 UBE2D1P51668 147 aa12.54□□□□□ -0.4
LTBR-205ENST00000535739 UNQ6190/PRO20217Q6UXQ8 127 aa12.54□□□□□ -0.4
LTBR-205ENST00000535739 KRTAP11-1Q8IUC1 163 aa12.54□□□□□ -0.4
LTBR-205ENST00000535739 IGLV7-43P04211 117 aa12.53□□□□□ -0.4
LTBR-205ENST00000535739 KRTDAPP60985 99 aa12.53□□□□□ -0.4
LTBR-205ENST00000535739 C6orf48Q9UBA6 75 aa12.53□□□□□ -0.4
LTBR-205ENST00000535739 A0A087WZ39 114 aa12.52□□□□□ -0.41
LTBR-205ENST00000535739 PET117Q6UWS5 81 aa12.52□□□□□ -0.41
LTBR-205ENST00000535739 CHTOPQ9Y3Y2 248 aaKnown RBP12.52□□□□□ -0.41
LTBR-205ENST00000535739 TLX1NBP0CAT3 122 aa12.51□□□□□ -0.41
LTBR-205ENST00000535739 LINC00242Q5T6M2 205 aa12.51□□□□□ -0.41
LTBR-205ENST00000535739 FAM19A5Q7Z5A7 132 aaPredicted RBP12.51□□□□□ -0.41
LTBR-205ENST00000535739 FAM19A3Q7Z5A8 133 aa12.51□□□□□ -0.41
LTBR-205ENST00000535739 PRR26Q8N8Z3 221 aa12.51□□□□□ -0.41
LTBR-205ENST00000535739 GAGE2EQ4V326 116 aa12.5□□□□□ -0.41
LTBR-205ENST00000535739 DIRC1Q969H9 104 aa12.5□□□□□ -0.41
LTBR-205ENST00000535739 GAGE2DQ9UEU5 116 aa12.5□□□□□ -0.41
LTBR-205ENST00000535739 TINCRA0A1B0GVN0 87 aa12.49□□□□□ -0.41
LTBR-205ENST00000535739 SEC11AP67812 179 aa12.49□□□□□ -0.41
LTBR-205ENST00000535739 F8VRH5 84 aa12.48□□□□□ -0.41
LTBR-205ENST00000535739 IGLC3P0DOY3 106 aa12.48□□□□□ -0.41
LTBR-205ENST00000535739 KIAA0087Q14695 138 aa12.48□□□□□ -0.41
LTBR-205ENST00000535739 KRTAP7-1Q8IUC3 87 aa12.48□□□□□ -0.41
LTBR-205ENST00000535739 GEMIN7Q9H840 131 aaKnown RBP12.48□□□□□ -0.41
LTBR-205ENST00000535739 HERVK_113P63121 156 aa12.47□□□□□ -0.41
LTBR-205ENST00000535739 LINC01545Q5VT33 79 aa12.47□□□□□ -0.41
LTBR-205ENST00000535739 H0Y9J4 135 aa12.46□□□□□ -0.41
LTBR-205ENST00000535739 PMCHL2Q9BQD1 86 aa12.46□□□□□ -0.41
LTBR-205ENST00000535739 C20orf202A1L168 122 aa12.44□□□□□ -0.42
LTBR-205ENST00000535739 C11orf86A6NJI1 115 aa12.44□□□□□ -0.42
LTBR-205ENST00000535739 C2orf82Q6UX34 121 aa12.44□□□□□ -0.42
LTBR-205ENST00000535739 M0QXV9 152 aa12.43□□□□□ -0.42
LTBR-205ENST00000535739 DPM2O94777 84 aa12.43□□□□□ -0.42
LTBR-205ENST00000535739 PLNP26678 52 aa12.43□□□□□ -0.42
LTBR-205ENST00000535739 IGLV5-45A0A087WSX0 123 aa12.42□□□□□ -0.42
LTBR-205ENST00000535739 TRBV30A0A0K0K1B3 111 aa12.42□□□□□ -0.42
LTBR-205ENST00000535739 IGKCP01834 107 aa12.42□□□□□ -0.42
LTBR-205ENST00000535739 UBE2BP63146 152 aa12.42□□□□□ -0.42
LTBR-205ENST00000535739 LINC00469Q8N7U9 141 aa12.42□□□□□ -0.42
LTBR-205ENST00000535739 CDKN2A-AS1Q9UH64 79 aa12.42□□□□□ -0.42
LTBR-205ENST00000535739 SCGB1D1O95968 90 aa12.41□□□□□ -0.42
LTBR-205ENST00000535739 NDUFC2-KCTD14E9PQ53 114 aa12.4□□□□□ -0.42
LTBR-205ENST00000535739 KRTAP1-4P0C5Y4 121 aa12.4□□□□□ -0.42
LTBR-205ENST00000535739 ZNF22P17026 224 aaPredicted RBP12.4□□□□□ -0.42
LTBR-205ENST00000535739 C9orf129Q5T035 196 aaKnown RBP12.4□□□□□ -0.42
LTBR-205ENST00000535739 TMEM170BQ5T4T1 132 aa12.4□□□□□ -0.42
LTBR-205ENST00000535739 H3BRM9 83 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms