RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 OR5C1Q8NGR4 320 aa1.65□□□□□ -2.15
SNHG1-202ENST00000535689 MCFD2Q8NI22 146 aa1.65□□□□□ -2.15
SNHG1-202ENST00000535689 SMIM4Q8WVI0 70 aa1.65□□□□□ -2.15
SNHG1-202ENST00000535689 BTF3L4Q96K17 158 aa1.65□□□□□ -2.15
SNHG1-202ENST00000535689 CARD19Q96LW7 228 aa1.65□□□□□ -2.15
SNHG1-202ENST00000535689 NKX6-2Q9C056 277 aaPredicted RBP1.65□□□□□ -2.15
SNHG1-202ENST00000535689 GSKIPQ9P0R6 139 aa1.65□□□□□ -2.15
SNHG1-202ENST00000535689 GVQW2A0A096LPI5 108 aaPredicted RBP1.64□□□□□ -2.15
SNHG1-202ENST00000535689 F6UZH7 168 aa1.64□□□□□ -2.15
SNHG1-202ENST00000535689 NUPR1O60356 82 aa1.64□□□□□ -2.15
SNHG1-202ENST00000535689 ARMS2P0C7Q2 107 aa1.64□□□□□ -2.15
SNHG1-202ENST00000535689 AQP4P55087 323 aa1.64□□□□□ -2.15
SNHG1-202ENST00000535689 UBE2BP63146 152 aa1.64□□□□□ -2.15
SNHG1-202ENST00000535689 UBE2L3P68036 154 aaKnown RBP1.64□□□□□ -2.15
SNHG1-202ENST00000535689 MEF2BQ02080 365 aaPredicted RBP1.64□□□□□ -2.15
SNHG1-202ENST00000535689 SS18Q15532 418 aa1.64□□□□□ -2.15
SNHG1-202ENST00000535689 ZNF56Q15929 161 aa1.64□□□□□ -2.15
SNHG1-202ENST00000535689 RGS21Q2M5E4 152 aa1.64□□□□□ -2.15
SNHG1-202ENST00000535689 C9orf116Q5BN46 136 aaPredicted RBP1.64□□□□□ -2.15
SNHG1-202ENST00000535689 CLPSL2Q6UWE3 100 aa1.64□□□□□ -2.15
SNHG1-202ENST00000535689 GOLT1AQ6ZVE7 132 aa1.64□□□□□ -2.15
SNHG1-202ENST00000535689 FP248Q71RG6 208 aaPredicted RBP1.64□□□□□ -2.15
SNHG1-202ENST00000535689 TOMM5Q8N4H5 51 aa1.64□□□□□ -2.15
SNHG1-202ENST00000535689 FXYD5Q96DB9 178 aa1.64□□□□□ -2.15
SNHG1-202ENST00000535689 LINC00526Q96FQ7 95 aa1.64□□□□□ -2.15
SNHG1-202ENST00000535689 ZNF471Q9BX82 626 aaPredicted RBP1.64□□□□□ -2.15
SNHG1-202ENST00000535689 NDUFA12Q9UI09 145 aa1.64□□□□□ -2.15
SNHG1-202ENST00000535689 ZFP30Q9Y2G7 519 aa1.64□□□□□ -2.15
SNHG1-202ENST00000535689 A0A087WXM4 84 aa1.63□□□□□ -2.15
SNHG1-202ENST00000535689 IGKV2D-26A0A0A0MRZ7 120 aa1.63□□□□□ -2.15
SNHG1-202ENST00000535689 MUC21A0A0G2JKD1 596 aa1.63□□□□□ -2.15
SNHG1-202ENST00000535689 C9orf170A2RU37 121 aa1.63□□□□□ -2.15
SNHG1-202ENST00000535689 C19orf71A6NCJ1 209 aa1.63□□□□□ -2.15
SNHG1-202ENST00000535689 NAP1L6A6NFF2 107 aa1.63□□□□□ -2.15
SNHG1-202ENST00000535689 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.63□□□□□ -2.15
SNHG1-202ENST00000535689 H3BQ85 93 aa1.63□□□□□ -2.15
SNHG1-202ENST00000535689 M0R2T5 61 aa1.63□□□□□ -2.15
SNHG1-202ENST00000535689 M0R381 172 aa1.63□□□□□ -2.15
SNHG1-202ENST00000535689 CST7O76096 145 aa1.63□□□□□ -2.15
SNHG1-202ENST00000535689 ESDP10768 282 aa1.63□□□□□ -2.15
SNHG1-202ENST00000535689 ZNF25P17030 456 aaPredicted RBP1.63□□□□□ -2.15
SNHG1-202ENST00000535689 RPL12P30050 165 aaKnown RBP1.63□□□□□ -2.15
SNHG1-202ENST00000535689 RPL28P46779 137 aaKnown RBP1.63□□□□□ -2.15
SNHG1-202ENST00000535689 LSM3P62310 102 aaKnown RBP1.63□□□□□ -2.15
SNHG1-202ENST00000535689 PPP1R1AQ13522 171 aa1.63□□□□□ -2.15
SNHG1-202ENST00000535689 NEDD8Q15843 81 aa1.63□□□□□ -2.15
SNHG1-202ENST00000535689 SPANXN1Q5VSR9 72 aa1.63□□□□□ -2.15
SNHG1-202ENST00000535689 MIR17HGQ75NE6 70 aa1.63□□□□□ -2.15
SNHG1-202ENST00000535689 ADM2Q7Z4H4 148 aa1.63□□□□□ -2.15
SNHG1-202ENST00000535689 FAM19A5Q7Z5A7 132 aaPredicted RBP1.63□□□□□ -2.15
SNHG1-202ENST00000535689 C5orf17Q8NAS9 161 aa1.63□□□□□ -2.15
SNHG1-202ENST00000535689 OR5A1Q8NGJ0 315 aa1.63□□□□□ -2.15
SNHG1-202ENST00000535689 FAM167A-AS1Q96KT0 104 aa1.63□□□□□ -2.15
SNHG1-202ENST00000535689 NPCDR1Q9BY65 106 aa1.63□□□□□ -2.15
SNHG1-202ENST00000535689 EIF5A2Q9GZV4 153 aaKnown RBP1.63□□□□□ -2.15
SNHG1-202ENST00000535689 C11orf1Q9H5F2 150 aa1.63□□□□□ -2.15
SNHG1-202ENST00000535689 RBM12B-AS1Q9P1G2 102 aa1.63□□□□□ -2.15
SNHG1-202ENST00000535689 EPDR1Q9UM22 224 aa1.63□□□□□ -2.15
SNHG1-202ENST00000535689 LSM5Q9Y4Y9 91 aaKnown RBP1.63□□□□□ -2.15
SNHG1-202ENST00000535689 ZNF706Q9Y5V0 76 aaPredicted RBP1.63□□□□□ -2.15
SNHG1-202ENST00000535689 UBE2L5PA0A1B0GUS4 154 aa1.62□□□□□ -2.15
SNHG1-202ENST00000535689 A0A1W2PNN7 141 aa1.62□□□□□ -2.15
SNHG1-202ENST00000535689 FAM24AA6NFZ4 105 aa1.62□□□□□ -2.15
SNHG1-202ENST00000535689 C1orf196B1AJZ1 125 aa1.62□□□□□ -2.15
SNHG1-202ENST00000535689 C8orf87E5RJ46 101 aa1.62□□□□□ -2.15
SNHG1-202ENST00000535689 H3BVH4 76 aa1.62□□□□□ -2.15
SNHG1-202ENST00000535689 NCR2O95944 276 aa1.62□□□□□ -2.15
SNHG1-202ENST00000535689 TCRAP04437 139 aa1.62□□□□□ -2.15
SNHG1-202ENST00000535689 CXCL1P09341 107 aa1.62□□□□□ -2.15
SNHG1-202ENST00000535689 LINC00614P0C842 121 aa1.62□□□□□ -2.15
SNHG1-202ENST00000535689 P0C880 135 aa1.62□□□□□ -2.15
SNHG1-202ENST00000535689 CDC34P49427 236 aaPredicted RBP1.62□□□□□ -2.15
SNHG1-202ENST00000535689 CEBPGP53567 150 aa1.62□□□□□ -2.15
SNHG1-202ENST00000535689 TMBIM6P55061 237 aa1.62□□□□□ -2.15
SNHG1-202ENST00000535689 MP68P56378 58 aa1.62□□□□□ -2.15
SNHG1-202ENST00000535689 H2BFSP57053 126 aa1.62□□□□□ -2.15
SNHG1-202ENST00000535689 FAM229BQ4G0N7 80 aa1.62□□□□□ -2.15
SNHG1-202ENST00000535689 TEX261Q6UWH6 196 aa1.62□□□□□ -2.15
SNHG1-202ENST00000535689 PHF5AQ7RTV0 110 aaKnown RBP1.62□□□□□ -2.15
SNHG1-202ENST00000535689 DAND5Q8N907 189 aa1.62□□□□□ -2.15
SNHG1-202ENST00000535689 GATD1Q8NB37 220 aa1.62□□□□□ -2.15
SNHG1-202ENST00000535689 HIST1H2BAQ96A08 127 aa1.62□□□□□ -2.15
SNHG1-202ENST00000535689 PACRGQ96M98 296 aaPredicted RBP1.62□□□□□ -2.15
SNHG1-202ENST00000535689 SND1-IT1Q9HBX3 110 aa1.62□□□□□ -2.15
SNHG1-202ENST00000535689 NIT2Q9NQR4 276 aa1.62□□□□□ -2.15
SNHG1-202ENST00000535689 TMEM167BQ9NRX6 74 aa1.62□□□□□ -2.15
SNHG1-202ENST00000535689 IGKV3OR2-268A0A0C4DH90 116 aa1.61□□□□□ -2.15
SNHG1-202ENST00000535689 A0A1W2PRE2 83 aa1.61□□□□□ -2.15
SNHG1-202ENST00000535689 M0R036 132 aa1.61□□□□□ -2.15
SNHG1-202ENST00000535689 NDUFB6O95139 128 aa1.61□□□□□ -2.15
SNHG1-202ENST00000535689 ZNF80P51504 273 aaPredicted RBP1.61□□□□□ -2.15
SNHG1-202ENST00000535689 NCS1P62166 190 aa1.61□□□□□ -2.15
SNHG1-202ENST00000535689 UBE2G1P62253 170 aa1.61□□□□□ -2.15
SNHG1-202ENST00000535689 LCE1CQ5T751 118 aa1.61□□□□□ -2.15
SNHG1-202ENST00000535689 LCE1BQ5T7P3 118 aa1.61□□□□□ -2.15
SNHG1-202ENST00000535689 RASL11AQ6T310 242 aa1.61□□□□□ -2.15
SNHG1-202ENST00000535689 FAM19A2Q8N3H0 131 aa1.61□□□□□ -2.15
SNHG1-202ENST00000535689 NUP35Q8NFH5 326 aa1.61□□□□□ -2.15
SNHG1-202ENST00000535689 OR2D3Q8NGH3 330 aa1.61□□□□□ -2.15
SNHG1-202ENST00000535689 WDR61Q9GZS3 305 aaKnown RBP1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms