RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 TRAV13-1A0A0B4J241 112 aa6.76□□□□□ -1.33
CLSTN3-206ENST00000535668 PCP4L1A6NKN8 68 aa6.76□□□□□ -1.33
CLSTN3-206ENST00000535668 SCGB1D1O95968 90 aa6.76□□□□□ -1.33
CLSTN3-206ENST00000535668 LINC00614P0C842 121 aa6.76□□□□□ -1.33
CLSTN3-206ENST00000535668 KIAA0087Q14695 138 aa6.76□□□□□ -1.33
CLSTN3-206ENST00000535668 C1orf137Q5JT78 98 aa6.76□□□□□ -1.33
CLSTN3-206ENST00000535668 Q6ZUT4 128 aa6.76□□□□□ -1.33
CLSTN3-206ENST00000535668 C5orf38Q86SI9 138 aa6.76□□□□□ -1.33
CLSTN3-206ENST00000535668 KRTAP7-1Q8IUC3 87 aa6.76□□□□□ -1.33
CLSTN3-206ENST00000535668 HSPB8Q9UJY1 196 aa6.76□□□□□ -1.33
CLSTN3-206ENST00000535668 PYGO1Q9Y3Y4 419 aa6.76□□□□□ -1.33
CLSTN3-206ENST00000535668 A0A087WZ39 114 aa6.75□□□□□ -1.33
CLSTN3-206ENST00000535668 PRSS47A8MTI9 375 aa6.75□□□□□ -1.33
CLSTN3-206ENST00000535668 NDUFA1O15239 70 aa6.75□□□□□ -1.33
CLSTN3-206ENST00000535668 MRPL51Q4U2R6 128 aaKnown RBP6.75□□□□□ -1.33
CLSTN3-206ENST00000535668 TEX43Q6ZNM6 134 aa6.75□□□□□ -1.33
CLSTN3-206ENST00000535668 PHF5AQ7RTV0 110 aaKnown RBP6.75□□□□□ -1.33
CLSTN3-206ENST00000535668 KRTAP11-1Q8IUC1 163 aa6.75□□□□□ -1.33
CLSTN3-206ENST00000535668 ORMDL3Q8N138 153 aa6.75□□□□□ -1.33
CLSTN3-206ENST00000535668 TRBV30A0A0K0K1B3 111 aa6.74□□□□□ -1.33
CLSTN3-206ENST00000535668 LINC01549A6NIU2 74 aa6.74□□□□□ -1.33
CLSTN3-206ENST00000535668 K7EMI3 77 aa6.74□□□□□ -1.33
CLSTN3-206ENST00000535668 RPL13AP40429 203 aaKnown RBP6.74□□□□□ -1.33
CLSTN3-206ENST00000535668 LINC00310P59036 64 aa6.74□□□□□ -1.33
CLSTN3-206ENST00000535668 RPL18AQ02543 176 aaKnown RBP6.74□□□□□ -1.33
CLSTN3-206ENST00000535668 PRR26Q8N8Z3 221 aa6.74□□□□□ -1.33
CLSTN3-206ENST00000535668 SMKR1H3BMG3 65 aa6.73□□□□□ -1.33
CLSTN3-206ENST00000535668 NPSP0C0P6 89 aa6.73□□□□□ -1.33
CLSTN3-206ENST00000535668 DDTP30046 118 aa6.73□□□□□ -1.33
CLSTN3-206ENST00000535668 CTAG1AP78358 180 aa6.73□□□□□ -1.33
CLSTN3-206ENST00000535668 C10orf25Q5T742 122 aa6.73□□□□□ -1.33
CLSTN3-206ENST00000535668 OPRPNQ99935 248 aaPredicted RBP6.73□□□□□ -1.33
CLSTN3-206ENST00000535668 SMIM2Q9BVW6 85 aa6.73□□□□□ -1.33
CLSTN3-206ENST00000535668 C6orf48Q9UBA6 75 aa6.73□□□□□ -1.33
CLSTN3-206ENST00000535668 NDUFC2-KCTD14E9PQ53 114 aa6.72□□□□□ -1.33
CLSTN3-206ENST00000535668 NUPR1O60356 82 aa6.72□□□□□ -1.33
CLSTN3-206ENST00000535668 TNFRSF6BO95407 300 aa6.72□□□□□ -1.33
CLSTN3-206ENST00000535668 G0S2P27469 103 aa6.72□□□□□ -1.33
CLSTN3-206ENST00000535668 KIAA1644Q3SXP7 199 aa6.72□□□□□ -1.33
CLSTN3-206ENST00000535668 PET117Q6UWS5 81 aa6.72□□□□□ -1.33
CLSTN3-206ENST00000535668 ORAOV1Q8WV07 137 aa6.72□□□□□ -1.33
CLSTN3-206ENST00000535668 VAMP8Q9BV40 100 aa6.72□□□□□ -1.33
CLSTN3-206ENST00000535668 NXT2Q9NPJ8 142 aaKnown RBP6.72□□□□□ -1.33
CLSTN3-206ENST00000535668 LINC01546A6NGU7 62 aa6.71□□□□□ -1.34
CLSTN3-206ENST00000535668 LEPROTL1O95214 131 aa6.71□□□□□ -1.34
CLSTN3-206ENST00000535668 CKS2P33552 79 aa6.71□□□□□ -1.34
CLSTN3-206ENST00000535668 RPL39P62891 51 aaKnown RBP6.71□□□□□ -1.34
CLSTN3-206ENST00000535668 RNASE13Q5GAN3 156 aaKnown RBP6.71□□□□□ -1.34
CLSTN3-206ENST00000535668 LINC00242Q5T6M2 205 aa6.71□□□□□ -1.34
CLSTN3-206ENST00000535668 UNQ6190/PRO20217Q6UXQ8 127 aa6.71□□□□□ -1.34
CLSTN3-206ENST00000535668 FA2HQ7L5A8 372 aa6.71□□□□□ -1.34
CLSTN3-206ENST00000535668 FAM19A3Q7Z5A8 133 aa6.71□□□□□ -1.34
CLSTN3-206ENST00000535668 MAP1LC3CQ9BXW4 147 aa6.71□□□□□ -1.34
CLSTN3-206ENST00000535668 FAM168BA1KXE4 195 aa6.7□□□□□ -1.34
CLSTN3-206ENST00000535668 PRELID3AQ96N28 172 aa6.7□□□□□ -1.34
CLSTN3-206ENST00000535668 MIEN1Q9BRT3 115 aa6.7□□□□□ -1.34
CLSTN3-206ENST00000535668 LINC00587B1AMM8 73 aa6.69□□□□□ -1.34
CLSTN3-206ENST00000535668 ZNF861PO60384 105 aa6.69□□□□□ -1.34
CLSTN3-206ENST00000535668 C3orf79P0CE67 100 aa6.69□□□□□ -1.34
CLSTN3-206ENST00000535668 KRTDAPP60985 99 aa6.69□□□□□ -1.34
CLSTN3-206ENST00000535668 MAP1LC3AQ9H492 121 aa6.69□□□□□ -1.34
CLSTN3-206ENST00000535668 HSBP1L1C9JCN9 74 aa6.68□□□□□ -1.34
CLSTN3-206ENST00000535668 C9orf129Q5T035 196 aaKnown RBP6.68□□□□□ -1.34
CLSTN3-206ENST00000535668 TP73-AS1Q9UF72 201 aa6.68□□□□□ -1.34
CLSTN3-206ENST00000535668 IGLV4-3A0A075B6K6 122 aa6.67□□□□□ -1.34
CLSTN3-206ENST00000535668 D6R8Y8 96 aa6.67□□□□□ -1.34
CLSTN3-206ENST00000535668 SYS1-DBNDD2H3BUS1 97 aa6.67□□□□□ -1.34
CLSTN3-206ENST00000535668 M0QXV9 152 aa6.67□□□□□ -1.34
CLSTN3-206ENST00000535668 IFI27P40305 119 aaPredicted RBP6.67□□□□□ -1.34
CLSTN3-206ENST00000535668 UBE2D1P51668 147 aa6.67□□□□□ -1.34
CLSTN3-206ENST00000535668 AMELXQ99217 191 aa6.67□□□□□ -1.34
CLSTN3-206ENST00000535668 PMCHL2Q9BQD1 86 aa6.67□□□□□ -1.34
CLSTN3-206ENST00000535668 UQCR10Q9UDW1 63 aa6.67□□□□□ -1.34
CLSTN3-206ENST00000535668 NPYP01303 97 aa6.66□□□□□ -1.34
CLSTN3-206ENST00000535668 HBDP02042 147 aa6.66□□□□□ -1.34
CLSTN3-206ENST00000535668 TMEM141Q96I45 108 aa6.66□□□□□ -1.34
CLSTN3-206ENST00000535668 C2orf88Q9BSF0 95 aa6.66□□□□□ -1.34
CLSTN3-206ENST00000535668 A0A0U1RQV1 116 aa6.65□□□□□ -1.34
CLSTN3-206ENST00000535668 M0R143 59 aa6.65□□□□□ -1.34
CLSTN3-206ENST00000535668 ATP5LO75964 103 aa6.65□□□□□ -1.34
CLSTN3-206ENST00000535668 GAGE2EQ4V326 116 aa6.65□□□□□ -1.34
CLSTN3-206ENST00000535668 LCE2AQ5TA79 106 aaPredicted RBP6.65□□□□□ -1.34
CLSTN3-206ENST00000535668 FAM19A5Q7Z5A7 132 aaPredicted RBP6.65□□□□□ -1.34
CLSTN3-206ENST00000535668 Q8IZM0 81 aa6.65□□□□□ -1.34
CLSTN3-206ENST00000535668 Q8N8P6 123 aa6.65□□□□□ -1.34
CLSTN3-206ENST00000535668 URB1-AS1Q96HZ7 61 aa6.65□□□□□ -1.34
CLSTN3-206ENST00000535668 C14orf144Q96I85 54 aa6.65□□□□□ -1.34
CLSTN3-206ENST00000535668 GAGE2DQ9UEU5 116 aa6.65□□□□□ -1.34
CLSTN3-206ENST00000535668 LINC01545Q5VT33 79 aa6.64□□□□□ -1.35
CLSTN3-206ENST00000535668 C2orf66Q6UXQ4 117 aa6.64□□□□□ -1.35
CLSTN3-206ENST00000535668 LINC00173Q6ZV60 143 aa6.64□□□□□ -1.35
CLSTN3-206ENST00000535668 FAM19A2Q8N3H0 131 aa6.64□□□□□ -1.35
CLSTN3-206ENST00000535668 IGIPA6NJ69 53 aa6.63□□□□□ -1.35
CLSTN3-206ENST00000535668 SPATA45Q537H7 98 aa6.63□□□□□ -1.35
CLSTN3-206ENST00000535668 ORMDL2Q53FV1 153 aa6.63□□□□□ -1.35
CLSTN3-206ENST00000535668 C2orf82Q6UX34 121 aa6.63□□□□□ -1.35
CLSTN3-206ENST00000535668 Q6ZN92 141 aa6.63□□□□□ -1.35
CLSTN3-206ENST00000535668 FAT4Q6V0I7 4981 aa6.62□□□□□ -1.35
CLSTN3-206ENST00000535668 IGLC3P0DOY3 106 aa6.62□□□□□ -1.35
CLSTN3-206ENST00000535668 UBE2BP63146 152 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms