RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 ICOSQ9Y6W8 199 aa2.27□□□□□ -2.05
CSMD3-210ENST00000534172 MEGF8Q7Z7M0 2845 aa2.26□□□□□ -2.05
CSMD3-210ENST00000534172 WDFY3Q8IZQ1 3526 aa2.26□□□□□ -2.05
CSMD3-210ENST00000534172 NBEAL2Q6ZNJ1 2754 aa2.26□□□□□ -2.05
CSMD3-210ENST00000534172 EPPK1P58107 5090 aaKnown RBP2.26□□□□□ -2.05
CSMD3-210ENST00000534172 A6NN06 94 aa2.26□□□□□ -2.05
CSMD3-210ENST00000534172 BUB1B-PAK6H3BSN5 160 aa2.26□□□□□ -2.05
CSMD3-210ENST00000534172 ERC2-IT1O76042 136 aa2.26□□□□□ -2.05
CSMD3-210ENST00000534172 DEFA4P12838 97 aa2.26□□□□□ -2.05
CSMD3-210ENST00000534172 CCL4P13236 92 aa2.26□□□□□ -2.05
CSMD3-210ENST00000534172 MIFP14174 115 aa2.26□□□□□ -2.05
CSMD3-210ENST00000534172 CD24P25063 80 aa2.26□□□□□ -2.05
CSMD3-210ENST00000534172 CHCHD7Q9BUK0 85 aa2.26□□□□□ -2.05
CSMD3-210ENST00000534172 PHLDA3Q9Y5J5 127 aa2.26□□□□□ -2.05
CSMD3-210ENST00000534172 GOLGA4Q13439 2230 aaKnown RBP2.26□□□□□ -2.05
CSMD3-210ENST00000534172 TANC2Q9HCD6 1990 aa2.26□□□□□ -2.05
CSMD3-210ENST00000534172 SH2D1AO60880 128 aa2.26□□□□□ -2.05
CSMD3-210ENST00000534172 ZNF32P17041 273 aa2.26□□□□□ -2.05
CSMD3-210ENST00000534172 SPINT3P49223 89 aa2.26□□□□□ -2.05
CSMD3-210ENST00000534172 LINC01554Q52M75 96 aa2.26□□□□□ -2.05
CSMD3-210ENST00000534172 IGFL3Q6UXB1 125 aa2.26□□□□□ -2.05
CSMD3-210ENST00000534172 SOSTDC1Q6X4U4 206 aa2.26□□□□□ -2.05
CSMD3-210ENST00000534172 FAM216BQ8N7L0 139 aa2.26□□□□□ -2.05
CSMD3-210ENST00000534172 IGLV3-16A0A075B6K0 115 aa2.25□□□□□ -2.05
CSMD3-210ENST00000534172 TRBV6-1A0A0K0K1D8 114 aa2.25□□□□□ -2.05
CSMD3-210ENST00000534172 NDUFA3O95167 84 aa2.25□□□□□ -2.05
CSMD3-210ENST00000534172 CGB3P0DN86 165 aa2.25□□□□□ -2.05
CSMD3-210ENST00000534172 CGB7P0DN87 165 aa2.25□□□□□ -2.05
CSMD3-210ENST00000534172 RNASE4P34096 147 aaKnown RBP2.25□□□□□ -2.05
CSMD3-210ENST00000534172 B9D2Q9BPU9 175 aa2.25□□□□□ -2.05
CSMD3-210ENST00000534172 BPESC1Q9GZL8 116 aa2.25□□□□□ -2.05
CSMD3-210ENST00000534172 ZNRD1Q9P1U0 126 aa2.25□□□□□ -2.05
CSMD3-210ENST00000534172 SDK1Q7Z5N4 2213 aa2.25□□□□□ -2.05
CSMD3-210ENST00000534172 IGKV3D-7A0A0C4DH55 119 aa2.25□□□□□ -2.05
CSMD3-210ENST00000534172 RPS27P42677 84 aaKnown RBP2.25□□□□□ -2.05
CSMD3-210ENST00000534172 FAM229BQ4G0N7 80 aa2.25□□□□□ -2.05
CSMD3-210ENST00000534172 SCXQ7RTU7 201 aa2.25□□□□□ -2.05
CSMD3-210ENST00000534172 LINC00269Q8N2A0 174 aa2.25□□□□□ -2.05
CSMD3-210ENST00000534172 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.24□□□□□ -2.05
CSMD3-210ENST00000534172 IGHV3-43A0A0B4J1X8 118 aa2.24□□□□□ -2.05
CSMD3-210ENST00000534172 A0A0J9YX75 114 aa2.24□□□□□ -2.05
CSMD3-210ENST00000534172 SAA1P0DJI8 122 aaPredicted RBP2.24□□□□□ -2.05
CSMD3-210ENST00000534172 SPANXN1Q5VSR9 72 aa2.24□□□□□ -2.05
CSMD3-210ENST00000534172 MIR17HGQ75NE6 70 aa2.24□□□□□ -2.05
CSMD3-210ENST00000534172 ADM2Q7Z4H4 148 aa2.24□□□□□ -2.05
CSMD3-210ENST00000534172 CLEC2BQ92478 149 aa2.24□□□□□ -2.05
CSMD3-210ENST00000534172 KRTAP4-4Q9BYR3 166 aa2.24□□□□□ -2.05
CSMD3-210ENST00000534172 A0A087WVE0 104 aa2.24□□□□□ -2.05
CSMD3-210ENST00000534172 SDHAF1A6NFY7 115 aa2.24□□□□□ -2.05
CSMD3-210ENST00000534172 H7C2G1 150 aa2.24□□□□□ -2.05
CSMD3-210ENST00000534172 ARMS2P0C7Q2 107 aa2.24□□□□□ -2.05
CSMD3-210ENST00000534172 DEFB116Q30KQ4 102 aa2.24□□□□□ -2.05
CSMD3-210ENST00000534172 Q8N6K4 173 aa2.24□□□□□ -2.05
CSMD3-210ENST00000534172 TMEM141Q96I45 108 aa2.24□□□□□ -2.05
CSMD3-210ENST00000534172 CYP4F30PQ9H0H9 118 aa2.24□□□□□ -2.05
CSMD3-210ENST00000534172 RYR2Q92736 4967 aa2.23□□□□□ -2.05
CSMD3-210ENST00000534172 MYOFQ9NZM1 2061 aa2.23□□□□□ -2.05
CSMD3-210ENST00000534172 IGKV1D-42A0A075B6H8 117 aa2.23□□□□□ -2.05
CSMD3-210ENST00000534172 TRAV23DV6A0A075B6W5 121 aa2.23□□□□□ -2.05
CSMD3-210ENST00000534172 PRM2P04554 102 aa2.23□□□□□ -2.05
CSMD3-210ENST00000534172 RMI2Q96E14 147 aa2.23□□□□□ -2.05
CSMD3-210ENST00000534172 ATMQ13315 3056 aa2.23□□□□□ -2.05
CSMD3-210ENST00000534172 hDV103S1A0JD37 113 aa2.23□□□□□ -2.05
CSMD3-210ENST00000534172 C11orf86A6NJI1 115 aa2.23□□□□□ -2.05
CSMD3-210ENST00000534172 M0R3E3 92 aa2.23□□□□□ -2.05
CSMD3-210ENST00000534172 FREM3P0C091 2139 aa2.23□□□□□ -2.05
CSMD3-210ENST00000534172 PI4KAP42356 2102 aa2.23□□□□□ -2.05
CSMD3-210ENST00000534172 RPL28P46779 137 aaKnown RBP2.23□□□□□ -2.05
CSMD3-210ENST00000534172 ASB16-AS1Q495Z4 193 aa2.23□□□□□ -2.05
CSMD3-210ENST00000534172 Q8IYB0 196 aa2.23□□□□□ -2.05
CSMD3-210ENST00000534172 FAM167A-AS1Q96KT0 104 aa2.23□□□□□ -2.05
CSMD3-210ENST00000534172 LAMA5O15230 3695 aa2.22□□□□□ -2.05
CSMD3-210ENST00000534172 TRAV22A0A0B4J277 110 aa2.22□□□□□ -2.05
CSMD3-210ENST00000534172 I3L3M4 83 aa2.22□□□□□ -2.05
CSMD3-210ENST00000534172 K7ERS5 55 aa2.22□□□□□ -2.05
CSMD3-210ENST00000534172 IGLV3-1P01715 115 aa2.22□□□□□ -2.05
CSMD3-210ENST00000534172 BAALC-AS2P0C853 105 aa2.22□□□□□ -2.05
CSMD3-210ENST00000534172 PATE2Q6UY27 113 aa2.22□□□□□ -2.05
CSMD3-210ENST00000534172 Q86TA4 180 aa2.22□□□□□ -2.05
CSMD3-210ENST00000534172 SCGB3A1Q96QR1 104 aa2.22□□□□□ -2.05
CSMD3-210ENST00000534172 NDUFA12Q9UI09 145 aa2.22□□□□□ -2.05
CSMD3-210ENST00000534172 IGHV3-21A0A0B4J1V1 117 aa2.22□□□□□ -2.05
CSMD3-210ENST00000534172 IGHV1-3A0A0C4DH29 117 aa2.22□□□□□ -2.05
CSMD3-210ENST00000534172 TRBV7-4A0A0J9YYF1 115 aa2.22□□□□□ -2.05
CSMD3-210ENST00000534172 GNRH2O43555 120 aa2.22□□□□□ -2.05
CSMD3-210ENST00000534172 TRGV3P03979 118 aa2.22□□□□□ -2.05
CSMD3-210ENST00000534172 FXYD7P58549 80 aa2.22□□□□□ -2.05
CSMD3-210ENST00000534172 LINC00322Q6ZN03 302 aaPredicted RBP2.22□□□□□ -2.05
CSMD3-210ENST00000534172 MUSTN1Q8IVN3 82 aa2.22□□□□□ -2.05
CSMD3-210ENST00000534172 CCL4L1Q8NHW4 92 aa2.22□□□□□ -2.05
CSMD3-210ENST00000534172 LINC01560Q8TB33 94 aa2.22□□□□□ -2.05
CSMD3-210ENST00000534172 SNURFQ9Y675 71 aa2.22□□□□□ -2.05
CSMD3-210ENST00000534172 CENPEQ02224 2701 aa2.21□□□□□ -2.06
CSMD3-210ENST00000534172 IGLV2-18A0A075B6J9 118 aa2.21□□□□□ -2.06
CSMD3-210ENST00000534172 A6NED7 52 aa2.21□□□□□ -2.06
CSMD3-210ENST00000534172 IGIPA6NJ69 53 aa2.21□□□□□ -2.06
CSMD3-210ENST00000534172 C16orf90A8MZG2 172 aa2.21□□□□□ -2.06
CSMD3-210ENST00000534172 IGKV1-16P04430 117 aa2.21□□□□□ -2.06
CSMD3-210ENST00000534172 KRTAP12-2P59991 146 aa2.21□□□□□ -2.06
CSMD3-210ENST00000534172 KRTAP5-1Q6L8H4 278 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms