RNA–Protein interactions for RNA: ENST00000533252.1

CASP4-211, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 215 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-211ENST00000533252 TRAV26-2A0A0B4J265 109 aa2.97□□□□□ -1.93
CASP4-211ENST00000533252 IGKV2-29A2NJV5 120 aaPredicted RBP2.97□□□□□ -1.93
CASP4-211ENST00000533252 C7orf77A4D0Y5 90 aa2.97□□□□□ -1.93
CASP4-211ENST00000533252 HIGD1CA8MV81 97 aa2.97□□□□□ -1.93
CASP4-211ENST00000533252 COX7A2LO14548 114 aa2.97□□□□□ -1.93
CASP4-211ENST00000533252 PPBPP02775 128 aa2.97□□□□□ -1.93
CASP4-211ENST00000533252 COX6A2Q02221 97 aa2.97□□□□□ -1.93
CASP4-211ENST00000533252 SYCNQ0VAF6 134 aa2.97□□□□□ -1.93
CASP4-211ENST00000533252 CNFNQ9BYD5 112 aa2.97□□□□□ -1.93
CASP4-211ENST00000533252 DNAH11Q96DT5 4516 aa2.97□□□□□ -1.93
CASP4-211ENST00000533252 PKHD1P08F94 4074 aa2.96□□□□□ -1.94
CASP4-211ENST00000533252 IGLV4-69A0A075B6H9 119 aa2.96□□□□□ -1.94
CASP4-211ENST00000533252 IGKV2-24A0A0C4DH68 120 aa2.96□□□□□ -1.94
CASP4-211ENST00000533252 TRBV6-5A0A0K0K1A5 114 aa2.96□□□□□ -1.94
CASP4-211ENST00000533252 LOC107984640A0A0U1RRK4 108 aa2.96□□□□□ -1.94
CASP4-211ENST00000533252 LINC00959A0A1B0GUT2 108 aa2.96□□□□□ -1.94
CASP4-211ENST00000533252 ADIRFQ15847 76 aa2.96□□□□□ -1.94
CASP4-211ENST00000533252 LYPD6BQ8NI32 183 aa2.96□□□□□ -1.94
CASP4-211ENST00000533252 RPL39LQ96EH5 51 aaKnown RBP2.96□□□□□ -1.94
CASP4-211ENST00000533252 CARD19Q96LW7 228 aa2.96□□□□□ -1.94
CASP4-211ENST00000533252 CAMK2N2Q96S95 79 aa2.96□□□□□ -1.94
CASP4-211ENST00000533252 IMMP2LQ96T52 175 aa2.96□□□□□ -1.94
CASP4-211ENST00000533252 C20orf78Q9BR46 151 aa2.96□□□□□ -1.94
CASP4-211ENST00000533252 NAT8Q9UHE5 227 aa2.96□□□□□ -1.94
CASP4-211ENST00000533252 FAT2Q9NYQ8 4349 aa2.95□□□□□ -1.94
CASP4-211ENST00000533252 TGIF2-C20orf24A0A0A6YYL0 155 aa2.95□□□□□ -1.94
CASP4-211ENST00000533252 TRAV13-1A0A0B4J241 112 aa2.95□□□□□ -1.94
CASP4-211ENST00000533252 TRBV27A0A0K0K1C4 114 aa2.95□□□□□ -1.94
CASP4-211ENST00000533252 K7EN84 100 aa2.95□□□□□ -1.94
CASP4-211ENST00000533252 MT-ND4LP03901 98 aa2.95□□□□□ -1.94
CASP4-211ENST00000533252 RAB4AP20338 218 aa2.95□□□□□ -1.94
CASP4-211ENST00000533252 COA6Q5JTJ3 125 aaKnown RBP2.95□□□□□ -1.94
CASP4-211ENST00000533252 MRPL52Q86TS9 123 aaKnown RBP2.95□□□□□ -1.94
CASP4-211ENST00000533252 LINC01551Q86U37 167 aa2.95□□□□□ -1.94
CASP4-211ENST00000533252 C2orf88Q9BSF0 95 aa2.95□□□□□ -1.94
CASP4-211ENST00000533252 CDC42SE2Q9NRR3 84 aa2.95□□□□□ -1.94
CASP4-211ENST00000533252 TMEM242Q9NWH2 141 aa2.95□□□□□ -1.94
CASP4-211ENST00000533252 DNAH5Q8TE73 4624 aa2.95□□□□□ -1.94
CASP4-211ENST00000533252 A0A096LNJ9 63 aa2.94□□□□□ -1.94
CASP4-211ENST00000533252 GVQW2A0A096LPI5 108 aaPredicted RBP2.94□□□□□ -1.94
CASP4-211ENST00000533252 MT-ND6P03923 174 aa2.94□□□□□ -1.94
CASP4-211ENST00000533252 IFI27P40305 119 aaPredicted RBP2.94□□□□□ -1.94
CASP4-211ENST00000533252 SEC11AP67812 179 aa2.94□□□□□ -1.94
CASP4-211ENST00000533252 HBBP68871 147 aa2.94□□□□□ -1.94
CASP4-211ENST00000533252 SPINK6Q6UWN8 80 aa2.94□□□□□ -1.94
CASP4-211ENST00000533252 CAMK2N1Q7Z7J9 78 aa2.94□□□□□ -1.94
CASP4-211ENST00000533252 AMN1Q8IY45 258 aa2.94□□□□□ -1.94
CASP4-211ENST00000533252 Q8N9L7 120 aa2.94□□□□□ -1.94
CASP4-211ENST00000533252 NUP35Q8NFH5 326 aa2.94□□□□□ -1.94
CASP4-211ENST00000533252 PACRGQ96M98 296 aaPredicted RBP2.94□□□□□ -1.94
CASP4-211ENST00000533252 TIMM21Q9BVV7 248 aa2.94□□□□□ -1.94
CASP4-211ENST00000533252 SPANXA1Q9NS26 97 aa2.94□□□□□ -1.94
CASP4-211ENST00000533252 PLAC8Q9NZF1 115 aa2.94□□□□□ -1.94
CASP4-211ENST00000533252 DYNC1H1Q14204 4646 aaKnown RBP2.94□□□□□ -1.94
CASP4-211ENST00000533252 LINC01549A6NIU2 74 aa2.93□□□□□ -1.94
CASP4-211ENST00000533252 NDUFA1O15239 70 aa2.93□□□□□ -1.94
CASP4-211ENST00000533252 SRP19P09132 144 aaKnown RBP2.93□□□□□ -1.94
CASP4-211ENST00000533252 TLX1NBP0CAT3 122 aa2.93□□□□□ -1.94
CASP4-211ENST00000533252 ESDP10768 282 aa2.93□□□□□ -1.94
CASP4-211ENST00000533252 UBE2AP49459 152 aa2.93□□□□□ -1.94
CASP4-211ENST00000533252 POLR2KP53803 58 aaKnown RBP2.93□□□□□ -1.94
CASP4-211ENST00000533252 CKS1BP61024 79 aa2.93□□□□□ -1.94
CASP4-211ENST00000533252 RPL18AQ02543 176 aaKnown RBP2.93□□□□□ -1.94
CASP4-211ENST00000533252 FAM104BQ5XKR9 115 aa2.93□□□□□ -1.94
CASP4-211ENST00000533252 TMEM136Q6ZRR5 245 aa2.93□□□□□ -1.94
CASP4-211ENST00000533252 ORMDL3Q8N138 153 aa2.93□□□□□ -1.94
CASP4-211ENST00000533252 OR10D4PQ8NGN7 298 aa2.93□□□□□ -1.94
CASP4-211ENST00000533252 SPACA4Q8TDM5 124 aa2.93□□□□□ -1.94
CASP4-211ENST00000533252 FLG2Q5D862 2391 aaPredicted RBP2.93□□□□□ -1.94
CASP4-211ENST00000533252 ABCA13Q86UQ4 5058 aa2.92□□□□□ -1.94
CASP4-211ENST00000533252 TRBV24-1A0A075B6N3 115 aa2.92□□□□□ -1.94
CASP4-211ENST00000533252 SMIM27A0A1W2PRY6 76 aa2.92□□□□□ -1.94
CASP4-211ENST00000533252 S100PP25815 95 aa2.92□□□□□ -1.94
CASP4-211ENST00000533252 RPL23P62829 140 aaKnown RBP2.92□□□□□ -1.94
CASP4-211ENST00000533252 SPAG11BQ08648 103 aa2.92□□□□□ -1.94
CASP4-211ENST00000533252 CIRBPQ14011 172 aaKnown RBP2.92□□□□□ -1.94
CASP4-211ENST00000533252 ORMDL2Q53FV1 153 aa2.92□□□□□ -1.94
CASP4-211ENST00000533252 KRTAP26-1Q6PEX3 210 aa2.92□□□□□ -1.94
CASP4-211ENST00000533252 TEX43Q6ZNM6 134 aa2.92□□□□□ -1.94
CASP4-211ENST00000533252 ATP5L2Q7Z4Y8 100 aa2.92□□□□□ -1.94
CASP4-211ENST00000533252 C5orf38Q86SI9 138 aa2.92□□□□□ -1.94
CASP4-211ENST00000533252 C15orf56Q8N910 161 aa2.92□□□□□ -1.94
CASP4-211ENST00000533252 MAP1LC3AQ9H492 121 aa2.92□□□□□ -1.94
CASP4-211ENST00000533252 LAMTOR2Q9Y2Q5 125 aa2.92□□□□□ -1.94
CASP4-211ENST00000533252 D6R8Y8 96 aa2.91□□□□□ -1.94
CASP4-211ENST00000533252 SMKR1H3BMG3 65 aa2.91□□□□□ -1.94
CASP4-211ENST00000533252 K7EMI3 77 aa2.91□□□□□ -1.94
CASP4-211ENST00000533252 UBE2BP63146 152 aa2.91□□□□□ -1.94
CASP4-211ENST00000533252 MRPS36P82909 103 aaKnown RBP2.91□□□□□ -1.94
CASP4-211ENST00000533252 MRPL51Q4U2R6 128 aaKnown RBP2.91□□□□□ -1.94
CASP4-211ENST00000533252 MRPL54Q6P161 138 aaKnown RBP2.91□□□□□ -1.94
CASP4-211ENST00000533252 ORAOV1Q8WV07 137 aa2.91□□□□□ -1.94
CASP4-211ENST00000533252 DIRC1Q969H9 104 aa2.91□□□□□ -1.94
CASP4-211ENST00000533252 PRELID3AQ96N28 172 aa2.91□□□□□ -1.94
CASP4-211ENST00000533252 GEMIN7Q9H840 131 aaKnown RBP2.91□□□□□ -1.94
CASP4-211ENST00000533252 NXT2Q9NPJ8 142 aaKnown RBP2.91□□□□□ -1.94
CASP4-211ENST00000533252 CYSLTR1Q9Y271 337 aa2.91□□□□□ -1.94
CASP4-211ENST00000533252 UBE2D4Q9Y2X8 147 aa2.91□□□□□ -1.94
CASP4-211ENST00000533252 V9GYV3 84 aa2.91□□□□□ -1.94
CASP4-211ENST00000533252 LRP1BQ9NZR2 4599 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms