RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ZNF22P17026 224 aaPredicted RBP7.62□□□□□ -1.19
SSBP3-214ENST00000533209 TOMM7Q9P0U1 55 aa7.62□□□□□ -1.19
SSBP3-214ENST00000533209 C6orf48Q9UBA6 75 aa7.62□□□□□ -1.19
SSBP3-214ENST00000533209 PKIGQ9Y2B9 76 aa7.62□□□□□ -1.19
SSBP3-214ENST00000533209 CHTOPQ9Y3Y2 248 aaKnown RBP7.62□□□□□ -1.19
SSBP3-214ENST00000533209 ABCA13Q86UQ4 5058 aa7.61□□□□□ -1.19
SSBP3-214ENST00000533209 IGKV2-24A0A0C4DH68 120 aa7.61□□□□□ -1.19
SSBP3-214ENST00000533209 LOC107984640A0A0U1RRK4 108 aa7.61□□□□□ -1.19
SSBP3-214ENST00000533209 SPINK8P0C7L1 97 aa7.61□□□□□ -1.19
SSBP3-214ENST00000533209 C6orf226Q5I0X4 101 aa7.61□□□□□ -1.19
SSBP3-214ENST00000533209 A0A087WYN8 130 aa7.6□□□□□ -1.19
SSBP3-214ENST00000533209 H3BRM9 83 aa7.6□□□□□ -1.19
SSBP3-214ENST00000533209 FABP4P15090 132 aa7.6□□□□□ -1.19
SSBP3-214ENST00000533209 PTTG1IPP53801 180 aa7.6□□□□□ -1.19
SSBP3-214ENST00000533209 MAJINQ3KP22 176 aa7.6□□□□□ -1.19
SSBP3-214ENST00000533209 Q5VSD8 79 aa7.6□□□□□ -1.19
SSBP3-214ENST00000533209 DPH3Q96FX2 82 aa7.6□□□□□ -1.19
SSBP3-214ENST00000533209 IGLV5-39A0A0G2JS06 123 aa7.59□□□□□ -1.19
SSBP3-214ENST00000533209 TRBV30A0A0K0K1B3 111 aa7.59□□□□□ -1.19
SSBP3-214ENST00000533209 EPM2AB3EWF7 344 aa7.59□□□□□ -1.19
SSBP3-214ENST00000533209 CKS1BP61024 79 aa7.59□□□□□ -1.19
SSBP3-214ENST00000533209 GAGE2BQ13066 116 aa7.59□□□□□ -1.19
SSBP3-214ENST00000533209 LINC00528Q8N1L1 170 aa7.59□□□□□ -1.19
SSBP3-214ENST00000533209 COX7B2Q8TF08 81 aa7.59□□□□□ -1.19
SSBP3-214ENST00000533209 PLAC8Q9NZF1 115 aa7.59□□□□□ -1.19
SSBP3-214ENST00000533209 LINC00474Q9P2X8 69 aa7.59□□□□□ -1.19
SSBP3-214ENST00000533209 HSPB8Q9UJY1 196 aa7.59□□□□□ -1.19
SSBP3-214ENST00000533209 F8VRH5 84 aa7.58□□□□□ -1.2
SSBP3-214ENST00000533209 FAM229AH3BQW9 127 aa7.58□□□□□ -1.2
SSBP3-214ENST00000533209 TLX1NBP0CAT3 122 aa7.58□□□□□ -1.2
SSBP3-214ENST00000533209 RPL18AQ02543 176 aaKnown RBP7.58□□□□□ -1.2
SSBP3-214ENST00000533209 ODF1Q14990 250 aa7.58□□□□□ -1.2
SSBP3-214ENST00000533209 C9orf116Q5BN46 136 aaPredicted RBP7.58□□□□□ -1.2
SSBP3-214ENST00000533209 COA6Q5JTJ3 125 aaKnown RBP7.58□□□□□ -1.2
SSBP3-214ENST00000533209 SRRM2Q9UQ35 2752 aaKnown RBP7.58□□□□□ -1.2
SSBP3-214ENST00000533209 H0Y8G0 127 aa7.57□□□□□ -1.2
SSBP3-214ENST00000533209 CXCL5P42830 114 aa7.57□□□□□ -1.2
SSBP3-214ENST00000533209 TMEM170BQ5T4T1 132 aa7.57□□□□□ -1.2
SSBP3-214ENST00000533209 Q6ZRP5 223 aa7.57□□□□□ -1.2
SSBP3-214ENST00000533209 STPG4Q8N801 248 aa7.57□□□□□ -1.2
SSBP3-214ENST00000533209 TMEM223A0PJW6 202 aa7.55□□□□□ -1.2
SSBP3-214ENST00000533209 NDUFC2-KCTD14E9PQ53 114 aa7.55□□□□□ -1.2
SSBP3-214ENST00000533209 A0A1W2PNN7 141 aa7.54□□□□□ -1.2
SSBP3-214ENST00000533209 KRTAP10-4P60372 401 aaPredicted RBP7.54□□□□□ -1.2
SSBP3-214ENST00000533209 GAGE2EQ4V326 116 aa7.54□□□□□ -1.2
SSBP3-214ENST00000533209 MAP1LC3CQ9BXW4 147 aa7.54□□□□□ -1.2
SSBP3-214ENST00000533209 GAGE2DQ9UEU5 116 aa7.54□□□□□ -1.2
SSBP3-214ENST00000533209 PCLOQ9Y6V0 5065 aa7.54□□□□□ -1.2
SSBP3-214ENST00000533209 VPS13BQ7Z7G8 4022 aa7.54□□□□□ -1.2
SSBP3-214ENST00000533209 PLA2G1BP04054 148 aaKnown RBP7.53□□□□□ -1.2
SSBP3-214ENST00000533209 SYS1-DBNDD2H3BUS1 97 aa7.52□□□□□ -1.21
SSBP3-214ENST00000533209 DPM2O94777 84 aa7.52□□□□□ -1.21
SSBP3-214ENST00000533209 PLNP26678 52 aa7.52□□□□□ -1.21
SSBP3-214ENST00000533209 PMCHL2Q9BQD1 86 aa7.52□□□□□ -1.21
SSBP3-214ENST00000533209 RPL37AP61513 92 aaKnown RBP7.51□□□□□ -1.21
SSBP3-214ENST00000533209 C9orf129Q5T035 196 aaKnown RBP7.51□□□□□ -1.21
SSBP3-214ENST00000533209 ZNF625Q96I27 306 aaPredicted RBP7.51□□□□□ -1.21
SSBP3-214ENST00000533209 FAM168BA1KXE4 195 aa7.5□□□□□ -1.21
SSBP3-214ENST00000533209 IGKCP01834 107 aa7.5□□□□□ -1.21
SSBP3-214ENST00000533209 KRTAP7-1Q8IUC3 87 aa7.5□□□□□ -1.21
SSBP3-214ENST00000533209 C3orf79P0CE67 100 aa7.49□□□□□ -1.21
SSBP3-214ENST00000533209 LINC01545Q5VT33 79 aa7.49□□□□□ -1.21
SSBP3-214ENST00000533209 PET117Q6UWS5 81 aa7.49□□□□□ -1.21
SSBP3-214ENST00000533209 C7orf33Q8WU49 177 aa7.49□□□□□ -1.21
SSBP3-214ENST00000533209 XAGE1AQ9HD64 81 aa7.49□□□□□ -1.21
SSBP3-214ENST00000533209 INAFM2P0DMQ5 153 aa7.48□□□□□ -1.21
SSBP3-214ENST00000533209 SFTA2Q6UW10 78 aa7.48□□□□□ -1.21
SSBP3-214ENST00000533209 LEPROTO15243 131 aa7.47□□□□□ -1.21
SSBP3-214ENST00000533209 TSPEAR-AS2P59090 65 aa7.47□□□□□ -1.21
SSBP3-214ENST00000533209 PHF5AQ7RTV0 110 aaKnown RBP7.47□□□□□ -1.21
SSBP3-214ENST00000533209 FAM19A5Q7Z5A7 132 aaPredicted RBP7.47□□□□□ -1.21
SSBP3-214ENST00000533209 ERG28Q9UKR5 140 aa7.47□□□□□ -1.21
SSBP3-214ENST00000533209 PFN2P35080 140 aa7.46□□□□□ -1.22
SSBP3-214ENST00000533209 KRTDAPP60985 99 aa7.46□□□□□ -1.22
SSBP3-214ENST00000533209 HERVK_113P61574 105 aa7.46□□□□□ -1.22
SSBP3-214ENST00000533209 HIST3H2BBQ8N257 126 aa7.46□□□□□ -1.22
SSBP3-214ENST00000533209 COX17Q14061 63 aa7.45□□□□□ -1.22
SSBP3-214ENST00000533209 SERTAD4-AS1Q5TG53 156 aa7.45□□□□□ -1.22
SSBP3-214ENST00000533209 PLEKHB2Q96CS7 222 aa7.45□□□□□ -1.22
SSBP3-214ENST00000533209 NDUFA12Q9UI09 145 aa7.45□□□□□ -1.22
SSBP3-214ENST00000533209 FLG2Q5D862 2391 aaPredicted RBP7.45□□□□□ -1.22
SSBP3-214ENST00000533209 MYCBP2O75592 4640 aa7.44□□□□□ -1.22
SSBP3-214ENST00000533209 J3QQQ9 107 aa7.44□□□□□ -1.22
SSBP3-214ENST00000533209 M0QXV9 152 aa7.44□□□□□ -1.22
SSBP3-214ENST00000533209 HNRNPA3P51991 378 aaKnown RBP7.44□□□□□ -1.22
SSBP3-214ENST00000533209 PRR3P79522 188 aaKnown RBP7.44□□□□□ -1.22
SSBP3-214ENST00000533209 MYMXA0A1B0GTQ4 84 aa7.43□□□□□ -1.22
SSBP3-214ENST00000533209 HERV-K104P63124 156 aa7.43□□□□□ -1.22
SSBP3-214ENST00000533209 KRTAP11-1Q8IUC1 163 aa7.43□□□□□ -1.22
SSBP3-214ENST00000533209 HIST1H2BLQ99880 126 aa7.43□□□□□ -1.22
SSBP3-214ENST00000533209 SND1-IT1Q9HBX3 110 aa7.43□□□□□ -1.22
SSBP3-214ENST00000533209 PLA2G2DQ9UNK4 145 aa7.43□□□□□ -1.22
SSBP3-214ENST00000533209 E9PLD3 99 aa7.42□□□□□ -1.22
SSBP3-214ENST00000533209 S100A6P06703 90 aa7.42□□□□□ -1.22
SSBP3-214ENST00000533209 LINC00158P58513 81 aa7.42□□□□□ -1.22
SSBP3-214ENST00000533209 SNRPEP62304 92 aaKnown RBP7.42□□□□□ -1.22
SSBP3-214ENST00000533209 C22orf24Q9Y442 160 aa7.42□□□□□ -1.22
SSBP3-214ENST00000533209 A0A0U1RRA0 63 aa7.41□□□□□ -1.22
SSBP3-214ENST00000533209 C20orf202A1L168 122 aa7.41□□□□□ -1.22
SSBP3-214ENST00000533209 SMIM13P0DJ93 91 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms