RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	TOMM7	Q9P0U1	55 aa		10.92	□□□□□ -0.66
CTSB-223	ENST00000532370	DMBT1	Q9UGM3	2413 aa	Predicted RBP	10.92	□□□□□ -0.66
CTSB-223	ENST00000532370	HIST1H2BK	O60814	126 aa		10.91	□□□□□ -0.66
CTSB-223	ENST00000532370	HBD	P02042	147 aa		10.91	□□□□□ -0.66
CTSB-223	ENST00000532370	HIST1H2BJ	P06899	126 aa		10.91	□□□□□ -0.66
CTSB-223	ENST00000532370	HIST1H2BO	P23527	126 aa		10.91	□□□□□ -0.66
CTSB-223	ENST00000532370	HIST1H2BB	P33778	126 aa		10.91	□□□□□ -0.66
CTSB-223	ENST00000532370	HIST1H2BD	P58876	126 aa		10.91	□□□□□ -0.66
CTSB-223	ENST00000532370	LINC00310	P59036	64 aa		10.91	□□□□□ -0.66
CTSB-223	ENST00000532370	HIST1H2BC	P62807	126 aa		10.91	□□□□□ -0.66
CTSB-223	ENST00000532370	PMVK	Q15126	192 aa		10.91	□□□□□ -0.66
CTSB-223	ENST00000532370	HIST2H2BE	Q16778	126 aa		10.91	□□□□□ -0.66
CTSB-223	ENST00000532370	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	10.91	□□□□□ -0.66
CTSB-223	ENST00000532370	LINC00469	Q8N7U9	141 aa		10.91	□□□□□ -0.66
CTSB-223	ENST00000532370	HIST1H2BH	Q93079	126 aa		10.91	□□□□□ -0.66
CTSB-223	ENST00000532370	HIST1H2BN	Q99877	126 aa		10.91	□□□□□ -0.66
CTSB-223	ENST00000532370	HIST1H2BM	Q99879	126 aa		10.91	□□□□□ -0.66
CTSB-223	ENST00000532370	TINCR	A0A1B0GVN0	87 aa		10.9	□□□□□ -0.66
CTSB-223	ENST00000532370	PDZD11	Q5EBL8	140 aa		10.9	□□□□□ -0.66
CTSB-223	ENST00000532370		Q6ZRP5	223 aa		10.9	□□□□□ -0.66
CTSB-223	ENST00000532370	C7orf33	Q8WU49	177 aa		10.9	□□□□□ -0.66
CTSB-223	ENST00000532370	C9orf116	Q5BN46	136 aa	Predicted RBP	10.89	□□□□□ -0.67
CTSB-223	ENST00000532370	PACRG	Q96M98	296 aa	Predicted RBP	10.89	□□□□□ -0.67
CTSB-223	ENST00000532370	SERF1A	O75920	110 aa		10.88	□□□□□ -0.67
CTSB-223	ENST00000532370	PRSS2	P07478	247 aa		10.88	□□□□□ -0.67
CTSB-223	ENST00000532370	NDUFA6	P56556	154 aa		10.88	□□□□□ -0.67
CTSB-223	ENST00000532370	C6orf226	Q5I0X4	101 aa		10.88	□□□□□ -0.67
CTSB-223	ENST00000532370	IGLV5-45	A0A087WSX0	123 aa		10.87	□□□□□ -0.67
CTSB-223	ENST00000532370	SMIM1	B2RUZ4	78 aa		10.87	□□□□□ -0.67
CTSB-223	ENST00000532370	TLX1NB	P0CAT3	122 aa		10.87	□□□□□ -0.67
CTSB-223	ENST00000532370	GAGE2E	Q4V326	116 aa		10.87	□□□□□ -0.67
CTSB-223	ENST00000532370		Q8IZM0	81 aa		10.87	□□□□□ -0.67
CTSB-223	ENST00000532370	GAGE2D	Q9UEU5	116 aa		10.87	□□□□□ -0.67
CTSB-223	ENST00000532370	TRBV30	A0A0K0K1B3	111 aa		10.86	□□□□□ -0.67
CTSB-223	ENST00000532370	FAM168B	A1KXE4	195 aa		10.86	□□□□□ -0.67
CTSB-223	ENST00000532370	HSBP1	O75506	76 aa		10.86	□□□□□ -0.67
CTSB-223	ENST00000532370	CKS1B	P61024	79 aa		10.86	□□□□□ -0.67
CTSB-223	ENST00000532370	SPINK8	P0C7L1	97 aa		10.85	□□□□□ -0.67
CTSB-223	ENST00000532370	PRR3	P79522	188 aa	Known RBP	10.85	□□□□□ -0.67
CTSB-223	ENST00000532370	COA6	Q5JTJ3	125 aa	Known RBP	10.85	□□□□□ -0.67
CTSB-223	ENST00000532370	KRTAP29-1	A8MX34	341 aa	Predicted RBP	10.84	□□□□□ -0.67
CTSB-223	ENST00000532370	NUPR1	O60356	82 aa		10.84	□□□□□ -0.67
CTSB-223	ENST00000532370	ATP5L	O75964	103 aa		10.84	□□□□□ -0.67
CTSB-223	ENST00000532370	NDUFC2-KCTD14	E9PQ53	114 aa		10.83	□□□□□ -0.68
CTSB-223	ENST00000532370		J3QL48	77 aa		10.83	□□□□□ -0.68
CTSB-223	ENST00000532370	IGLC3	P0DOY3	106 aa		10.83	□□□□□ -0.68
CTSB-223	ENST00000532370	PHF5A	Q7RTV0	110 aa	Known RBP	10.83	□□□□□ -0.68
CTSB-223	ENST00000532370	KRTAP7-1	Q8IUC3	87 aa		10.82	□□□□□ -0.68
CTSB-223	ENST00000532370	FAM19A2	Q8N3H0	131 aa		10.82	□□□□□ -0.68
CTSB-223	ENST00000532370	COX7B2	Q8TF08	81 aa		10.82	□□□□□ -0.68
CTSB-223	ENST00000532370	C9orf129	Q5T035	196 aa	Known RBP	10.81	□□□□□ -0.68
CTSB-223	ENST00000532370		F8VRH5	84 aa		10.8	□□□□□ -0.68
CTSB-223	ENST00000532370	ZNF22	P17026	224 aa	Predicted RBP	10.8	□□□□□ -0.68
CTSB-223	ENST00000532370	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	10.8	□□□□□ -0.68
CTSB-223	ENST00000532370		H3BRM9	83 aa		10.79	□□□□□ -0.68
CTSB-223	ENST00000532370	C11orf86	A6NJI1	115 aa		10.78	□□□□□ -0.68
CTSB-223	ENST00000532370	IFI27L1	Q96BM0	104 aa		10.78	□□□□□ -0.68
CTSB-223	ENST00000532370	LEPROTL1	O95214	131 aa		10.77	□□□□□ -0.69
CTSB-223	ENST00000532370	OXT	P01178	125 aa		10.77	□□□□□ -0.69
CTSB-223	ENST00000532370	CXCL5	P42830	114 aa		10.77	□□□□□ -0.69
CTSB-223	ENST00000532370	KRTAP11-1	Q8IUC1	163 aa		10.77	□□□□□ -0.69
CTSB-223	ENST00000532370	XAGE1A	Q9HD64	81 aa		10.77	□□□□□ -0.69
CTSB-223	ENST00000532370	TNXB	P22105	4242 aa		10.76	□□□□□ -0.69
CTSB-223	ENST00000532370	TRAV12-1	A0A0B4J245	112 aa		10.76	□□□□□ -0.69
CTSB-223	ENST00000532370	IGLV5-39	A0A0G2JS06	123 aa		10.76	□□□□□ -0.69
CTSB-223	ENST00000532370	PSORS1C2	Q9UIG4	136 aa		10.76	□□□□□ -0.69
CTSB-223	ENST00000532370	HSPB8	Q9UJY1	196 aa		10.76	□□□□□ -0.69
CTSB-223	ENST00000532370	CHTOP	Q9Y3Y2	248 aa	Known RBP	10.76	□□□□□ -0.69
CTSB-223	ENST00000532370	TMEM170B	Q5T4T1	132 aa		10.74	□□□□□ -0.69
CTSB-223	ENST00000532370	SERTAD4-AS1	Q5TG53	156 aa		10.74	□□□□□ -0.69
CTSB-223	ENST00000532370		M0QXV9	152 aa		10.73	□□□□□ -0.69
CTSB-223	ENST00000532370	SRSF9	Q13242	221 aa	Known RBP eCLIP	10.73	□□□□□ -0.69
CTSB-223	ENST00000532370	FABP4	P15090	132 aa		10.71	□□□□□ -0.69
CTSB-223	ENST00000532370	C1orf137	Q5JT78	98 aa		10.71	□□□□□ -0.69
CTSB-223	ENST00000532370		H0Y8G0	127 aa		10.7	□□□□□ -0.7
CTSB-223	ENST00000532370	SPINK6	Q6UWN8	80 aa		10.7	□□□□□ -0.7
CTSB-223	ENST00000532370	HMCN2	Q8NDA2	5059 aa		10.69	□□□□□ -0.7
CTSB-223	ENST00000532370	MT1HL1	P0DM35	61 aa		10.69	□□□□□ -0.7
CTSB-223	ENST00000532370	ODF1	Q14990	250 aa		10.69	□□□□□ -0.7
CTSB-223	ENST00000532370	C22orf24	Q9Y442	160 aa		10.69	□□□□□ -0.7
CTSB-223	ENST00000532370	TMEM223	A0PJW6	202 aa		10.68	□□□□□ -0.7
CTSB-223	ENST00000532370	UBE2B	P63146	152 aa		10.68	□□□□□ -0.7
CTSB-223	ENST00000532370	PFN2	P35080	140 aa		10.67	□□□□□ -0.7
CTSB-223	ENST00000532370	ZNF625	Q96I27	306 aa	Predicted RBP	10.67	□□□□□ -0.7
CTSB-223	ENST00000532370	MAP1LC3C	Q9BXW4	147 aa		10.67	□□□□□ -0.7
CTSB-223	ENST00000532370	HIST3H2BB	Q8N257	126 aa		10.66	□□□□□ -0.7
CTSB-223	ENST00000532370	SYS1-DBNDD2	H3BUS1	97 aa		10.65	□□□□□ -0.7
CTSB-223	ENST00000532370	S100A6	P06703	90 aa		10.65	□□□□□ -0.7
CTSB-223	ENST00000532370	IGLV7-43	P04211	117 aa		10.64	□□□□□ -0.71
CTSB-223	ENST00000532370	ERG28	Q9UKR5	140 aa		10.64	□□□□□ -0.71
CTSB-223	ENST00000532370	PLN	P26678	52 aa		10.63	□□□□□ -0.71
CTSB-223	ENST00000532370	C5orf52	A6NGY3	159 aa		10.62	□□□□□ -0.71
CTSB-223	ENST00000532370	PET117	Q6UWS5	81 aa		10.62	□□□□□ -0.71
CTSB-223	ENST00000532370	MRPL55	Q7Z7F7	128 aa	Known RBP	10.62	□□□□□ -0.71
CTSB-223	ENST00000532370	LINC01600	Q96MT4	127 aa		10.62	□□□□□ -0.71
CTSB-223	ENST00000532370	HIST1H2BL	Q99880	126 aa		10.62	□□□□□ -0.71
CTSB-223	ENST00000532370	PMCHL2	Q9BQD1	86 aa		10.62	□□□□□ -0.71
CTSB-223	ENST00000532370	C3orf79	P0CE67	100 aa		10.61	□□□□□ -0.71
CTSB-223	ENST00000532370	LBH	Q53QV2	105 aa	Predicted RBP	10.61	□□□□□ -0.71
CTSB-223	ENST00000532370	LINC01545	Q5VT33	79 aa		10.61	□□□□□ -0.71

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