RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 UQCRQO14949 82 aa8.01□□□□□ -1.13
PTPRK-221ENST00000532331 SPATA3Q8NHX4 192 aa8.01□□□□□ -1.13
PTPRK-221ENST00000532331 IGLV4-60A0A075B6I1 120 aa8.01□□□□□ -1.13
PTPRK-221ENST00000532331 HRCT1Q6UXD1 115 aa8.01□□□□□ -1.13
PTPRK-221ENST00000532331 CSDC2Q9Y534 153 aaKnown RBP8.01□□□□□ -1.13
PTPRK-221ENST00000532331 POLQO75417 2590 aa8□□□□□ -1.13
PTPRK-221ENST00000532331 IGLV9-49A0A0B4J1Y8 123 aa8□□□□□ -1.13
PTPRK-221ENST00000532331 URB1-AS1Q96HZ7 61 aa8□□□□□ -1.13
PTPRK-221ENST00000532331 LINC00694P0DN24 101 aa8□□□□□ -1.13
PTPRK-221ENST00000532331 ANKRD17O75179 2603 aaKnown RBP7.99□□□□□ -1.13
PTPRK-221ENST00000532331 F8P00451 2351 aa7.99□□□□□ -1.13
PTPRK-221ENST00000532331 COX6A2Q02221 97 aa7.99□□□□□ -1.13
PTPRK-221ENST00000532331 MTORP42345 2549 aa7.98□□□□□ -1.13
PTPRK-221ENST00000532331 LINC00310P59036 64 aa7.98□□□□□ -1.13
PTPRK-221ENST00000532331 SETD2Q9BYW2 2564 aaPredicted RBP7.98□□□□□ -1.13
PTPRK-221ENST00000532331 C9orf116Q5BN46 136 aaPredicted RBP7.98□□□□□ -1.13
PTPRK-221ENST00000532331 AMELXQ99217 191 aa7.97□□□□□ -1.13
PTPRK-221ENST00000532331 F8WDY8 70 aa7.97□□□□□ -1.13
PTPRK-221ENST00000532331 LINC01556Q5JQF7 62 aa7.97□□□□□ -1.13
PTPRK-221ENST00000532331 C1orf137Q5JT78 98 aa7.97□□□□□ -1.13
PTPRK-221ENST00000532331 WFDC13Q8IUB5 93 aa7.97□□□□□ -1.13
PTPRK-221ENST00000532331 C10orf25Q5T742 122 aa7.97□□□□□ -1.13
PTPRK-221ENST00000532331 FAM236DA0A1B0GTK5 79 aa7.96□□□□□ -1.13
PTPRK-221ENST00000532331 A0A1B0GUV1 79 aa7.96□□□□□ -1.13
PTPRK-221ENST00000532331 FAM236CP0DP71 79 aa7.96□□□□□ -1.13
PTPRK-221ENST00000532331 TRBV10-3A0A0K0K1G6 114 aa7.96□□□□□ -1.14
PTPRK-221ENST00000532331 IMUPQ9GZP8 106 aa7.96□□□□□ -1.14
PTPRK-221ENST00000532331 REG3GQ6UW15 175 aa7.96□□□□□ -1.14
PTPRK-221ENST00000532331 Q6ZSN1 163 aa7.96□□□□□ -1.14
PTPRK-221ENST00000532331 C3orf22Q8N5N4 141 aa7.96□□□□□ -1.14
PTPRK-221ENST00000532331 FLNBO75369 2602 aaKnown RBP7.95□□□□□ -1.14
PTPRK-221ENST00000532331 FAM19A3Q7Z5A8 133 aa7.95□□□□□ -1.14
PTPRK-221ENST00000532331 ACANP16112 2415 aa7.95□□□□□ -1.14
PTPRK-221ENST00000532331 NTM-AS1Q6ZSK4 140 aa7.94□□□□□ -1.14
PTPRK-221ENST00000532331 PCSK5Q92824 1860 aa7.94□□□□□ -1.14
PTPRK-221ENST00000532331 TSPEAR-AS2P59090 65 aa7.93□□□□□ -1.14
PTPRK-221ENST00000532331 Q8N814 137 aa7.93□□□□□ -1.14
PTPRK-221ENST00000532331 C2orf48Q96LS8 159 aa7.93□□□□□ -1.14
PTPRK-221ENST00000532331 ESRGQ1W209 222 aa7.93□□□□□ -1.14
PTPRK-221ENST00000532331 NDUFC2-KCTD14E9PQ53 114 aa7.93□□□□□ -1.14
PTPRK-221ENST00000532331 SERP2Q8N6R1 65 aa7.92□□□□□ -1.14
PTPRK-221ENST00000532331 NDUFC1O43677 76 aa7.92□□□□□ -1.14
PTPRK-221ENST00000532331 LINC01561Q8N1V8 128 aa7.92□□□□□ -1.14
PTPRK-221ENST00000532331 C11orf72Q8NBR9 251 aa7.91□□□□□ -1.14
PTPRK-221ENST00000532331 H3BNG1 76 aa7.91□□□□□ -1.14
PTPRK-221ENST00000532331 PRR3P79522 188 aaKnown RBP7.91□□□□□ -1.14
PTPRK-221ENST00000532331 CIRBP-AS1Q8TBR5 109 aa7.91□□□□□ -1.14
PTPRK-221ENST00000532331 X6R8D5 127 aa7.91□□□□□ -1.14
PTPRK-221ENST00000532331 FAM229AH3BQW9 127 aa7.91□□□□□ -1.14
PTPRK-221ENST00000532331 Q6JHZ5 121 aa7.9□□□□□ -1.14
PTPRK-221ENST00000532331 A0A096LNT2 108 aa7.9□□□□□ -1.14
PTPRK-221ENST00000532331 ADAMTSL4-AS1Q5T5F5 129 aa7.9□□□□□ -1.14
PTPRK-221ENST00000532331 COL27A1Q8IZC6 1860 aaPredicted RBP7.9□□□□□ -1.15
PTPRK-221ENST00000532331 A0A096LNJ9 63 aa7.9□□□□□ -1.15
PTPRK-221ENST00000532331 C16orf90A8MZG2 172 aa7.9□□□□□ -1.15
PTPRK-221ENST00000532331 ATP5EP56381 51 aaPredicted RBP7.9□□□□□ -1.15
PTPRK-221ENST00000532331 MPLKIPQ8TAP9 179 aa7.9□□□□□ -1.15
PTPRK-221ENST00000532331 BRK1Q8WUW1 75 aa7.89□□□□□ -1.15
PTPRK-221ENST00000532331 HECTD1Q9ULT8 2610 aa7.89□□□□□ -1.15
PTPRK-221ENST00000532331 NBDYA0A0U1RRE5 68 aa7.89□□□□□ -1.15
PTPRK-221ENST00000532331 Q8N9L7 120 aa7.89□□□□□ -1.15
PTPRK-221ENST00000532331 MRPL55Q7Z7F7 128 aaKnown RBP7.88□□□□□ -1.15
PTPRK-221ENST00000532331 PRR15LQ9BU68 103 aa7.88□□□□□ -1.15
PTPRK-221ENST00000532331 A0A087WYN8 130 aa7.88□□□□□ -1.15
PTPRK-221ENST00000532331 K7EIL1 84 aa7.88□□□□□ -1.15
PTPRK-221ENST00000532331 SNURFQ9Y675 71 aa7.88□□□□□ -1.15
PTPRK-221ENST00000532331 K7ERS5 55 aa7.88□□□□□ -1.15
PTPRK-221ENST00000532331 PRYO14603 147 aa7.88□□□□□ -1.15
PTPRK-221ENST00000532331 KIF25-AS1Q9Y6Z4 181 aa7.87□□□□□ -1.15
PTPRK-221ENST00000532331 FAM240AA0A1B0GVK7 77 aa7.86□□□□□ -1.15
PTPRK-221ENST00000532331 LINC00315P59091 139 aa7.86□□□□□ -1.15
PTPRK-221ENST00000532331 Q8NAQ8 132 aa7.86□□□□□ -1.15
PTPRK-221ENST00000532331 Q6ZRU5 148 aa7.86□□□□□ -1.15
PTPRK-221ENST00000532331 FAM30AQ9NZY2 134 aa7.86□□□□□ -1.15
PTPRK-221ENST00000532331 V9GYY9 64 aa7.86□□□□□ -1.15
PTPRK-221ENST00000532331 SPTSSBQ8NFR3 76 aa7.86□□□□□ -1.15
PTPRK-221ENST00000532331 XGP55808 180 aa7.85□□□□□ -1.15
PTPRK-221ENST00000532331 Q9BRP9 147 aa7.85□□□□□ -1.15
PTPRK-221ENST00000532331 AGRNO00468 2067 aa7.85□□□□□ -1.15
PTPRK-221ENST00000532331 COX7CP15954 63 aa7.85□□□□□ -1.15
PTPRK-221ENST00000532331 KRTAP10-11P60412 298 aa7.84□□□□□ -1.15
PTPRK-221ENST00000532331 KRTAP1-3Q8IUG1 177 aa7.83□□□□□ -1.16
PTPRK-221ENST00000532331 FAM19A4Q96LR4 140 aa7.83□□□□□ -1.16
PTPRK-221ENST00000532331 RTL8CO15255 209 aa7.82□□□□□ -1.16
PTPRK-221ENST00000532331 SVIPQ8NHG7 77 aa7.82□□□□□ -1.16
PTPRK-221ENST00000532331 LINC00588Q9Y4M8 146 aa7.82□□□□□ -1.16
PTPRK-221ENST00000532331 SERP1Q9Y6X1 66 aa7.82□□□□□ -1.16
PTPRK-221ENST00000532331 PRR4Q16378 134 aa7.82□□□□□ -1.16
PTPRK-221ENST00000532331 UTRNP46939 3433 aa7.82□□□□□ -1.16
PTPRK-221ENST00000532331 Q6Q795 121 aa7.81□□□□□ -1.16
PTPRK-221ENST00000532331 LINC00575Q6W349 94 aa7.81□□□□□ -1.16
PTPRK-221ENST00000532331 IGHV6-1A0A0B4J1U7 121 aa7.8□□□□□ -1.16
PTPRK-221ENST00000532331 KRTAP10-3P60369 221 aa7.8□□□□□ -1.16
PTPRK-221ENST00000532331 TRAV7A0A075B6U4 112 aa7.8□□□□□ -1.16
PTPRK-221ENST00000532331 LINC01546A6NGU7 62 aa7.79□□□□□ -1.16
PTPRK-221ENST00000532331 IGLV5-39A0A0G2JS06 123 aa7.79□□□□□ -1.16
PTPRK-221ENST00000532331 C22orf24Q9Y442 160 aa7.79□□□□□ -1.16
PTPRK-221ENST00000532331 Q6ZVQ6 151 aa7.79□□□□□ -1.16
PTPRK-221ENST00000532331 A0A087WSZ3 146 aa7.78□□□□□ -1.16
PTPRK-221ENST00000532331 IGHV3OR16-9A0A0B4J2B5 98 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms