RNA–Protein interactions for RNA: ENST00000532224.5

PTPN22-209, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 2

Gene PTPN22, Length 2,421 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-209ENST00000532224 RETNQ9HD89 108 aa1.34□□□□□ -2.19
PTPN22-209ENST00000532224 SPANXB1Q9NS25 103 aaPredicted RBP1.34□□□□□ -2.19
PTPN22-209ENST00000532224 LRP1BQ9NZR2 4599 aa1.34□□□□□ -2.19
PTPN22-209ENST00000532224 HIGD1BQ9P298 99 aa1.34□□□□□ -2.19
PTPN22-209ENST00000532224 DNAH8Q96JB1 4490 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 IGKV3-7A0A075B6H7 116 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 A0A087WTM6 91 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 IGKV2D-26A0A0A0MRZ7 120 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 LINC00959A0A1B0GUT2 108 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 A4D1N5 150 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 LRCOL1A6NCL2 159 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 ZNF815PA8K554 130 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 COLCA2A8K830 154 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 KRTAP9-6A8MVA2 160 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 IGLL5B9A064 214 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 H3BTX0 84 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 LEPROTO15243 131 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 DPM2O94777 84 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 LEPROTL1O95214 131 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 NPYP01303 97 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 LINC00614P0C842 121 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 DEFB130BP0DP73 79 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 DEFB130AP0DP74 79 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 KRTAP10-12P60413 245 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 ESRGQ1W209 222 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 FAM229BQ4G0N7 80 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 ZFAND6Q6FIF0 208 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 LINC00469Q8N7U9 141 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 C9orf163Q8N9P6 203 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 CHCHD5Q9BSY4 110 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 SPANXDQ9BXN6 97 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 GEMIN7Q9H840 131 aaKnown RBP1.34□□□□□ -2.2
PTPN22-209ENST00000532224 SPANXCQ9NY87 97 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 PLAC8Q9NZF1 115 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 ZNF706Q9Y5V0 76 aaPredicted RBP1.34□□□□□ -2.2
PTPN22-209ENST00000532224 HMCN2Q8NDA2 5059 aa1.34□□□□□ -2.2
PTPN22-209ENST00000532224 DNAH11Q96DT5 4516 aa1.33□□□□□ -2.2
PTPN22-209ENST00000532224 IGHV3OR16-9A0A0B4J2B5 98 aa1.33□□□□□ -2.2
PTPN22-209ENST00000532224 MYMXA0A1B0GTQ4 84 aa1.33□□□□□ -2.2
PTPN22-209ENST00000532224 C16orf90A8MZG2 172 aa1.33□□□□□ -2.2
PTPN22-209ENST00000532224 HSBP1O75506 76 aa1.33□□□□□ -2.2
PTPN22-209ENST00000532224 OXTP01178 125 aa1.33□□□□□ -2.2
PTPN22-209ENST00000532224 APOC3P02656 99 aa1.33□□□□□ -2.2
PTPN22-209ENST00000532224 FXYD7P58549 80 aa1.33□□□□□ -2.2
PTPN22-209ENST00000532224 RPL24P83731 157 aaKnown RBP1.33□□□□□ -2.2
PTPN22-209ENST00000532224 GAGE5Q13069 117 aa1.33□□□□□ -2.2
PTPN22-209ENST00000532224 LINC01620Q4KN68 170 aa1.33□□□□□ -2.2
PTPN22-209ENST00000532224 LINC00173Q6ZV60 143 aa1.33□□□□□ -2.2
PTPN22-209ENST00000532224 SMIM29Q86T20 159 aa1.33□□□□□ -2.2
PTPN22-209ENST00000532224 IFI27L1Q96BM0 104 aa1.33□□□□□ -2.2
PTPN22-209ENST00000532224 CARD19Q96LW7 228 aa1.33□□□□□ -2.2
PTPN22-209ENST00000532224 SCGB3A1Q96QR1 104 aa1.33□□□□□ -2.2
PTPN22-209ENST00000532224 NHP2Q9NX24 153 aaKnown RBP1.33□□□□□ -2.2
PTPN22-209ENST00000532224 VPS13BQ7Z7G8 4022 aa1.33□□□□□ -2.2
PTPN22-209ENST00000532224 RNF213Q63HN8 5207 aa1.33□□□□□ -2.2
PTPN22-209ENST00000532224 HSPG2P98160 4391 aa1.33□□□□□ -2.2
PTPN22-209ENST00000532224 A0A1B0GW54 56 aa1.32□□□□□ -2.2
PTPN22-209ENST00000532224 E9PLD3 99 aa1.32□□□□□ -2.2
PTPN22-209ENST00000532224 SMIM6P0DI80 62 aa1.32□□□□□ -2.2
PTPN22-209ENST00000532224 OCIAD2Q56VL3 154 aa1.32□□□□□ -2.2
PTPN22-209ENST00000532224 FAM74A4Q5TZK3 123 aa1.32□□□□□ -2.2
PTPN22-209ENST00000532224 Q6ZRU5 148 aa1.32□□□□□ -2.2
PTPN22-209ENST00000532224 NTM-AS1Q6ZSK4 140 aa1.32□□□□□ -2.2
PTPN22-209ENST00000532224 MAPKAPK5-AS1Q8N8E1 139 aa1.32□□□□□ -2.2
PTPN22-209ENST00000532224 CHCHD10Q8WYQ3 142 aaPredicted RBP1.32□□□□□ -2.2
PTPN22-209ENST00000532224 SAMD10Q9BYL1 202 aa1.32□□□□□ -2.2
PTPN22-209ENST00000532224 FRAS1Q86XX4 4008 aa1.32□□□□□ -2.2
PTPN22-209ENST00000532224 TMEM223A0PJW6 202 aa1.32□□□□□ -2.2
PTPN22-209ENST00000532224 NDUFC2-KCTD14E9PQ53 114 aa1.32□□□□□ -2.2
PTPN22-209ENST00000532224 SCGB1D1O95968 90 aa1.32□□□□□ -2.2
PTPN22-209ENST00000532224 INAFM2P0DMQ5 153 aa1.32□□□□□ -2.2
PTPN22-209ENST00000532224 PFN2P35080 140 aa1.32□□□□□ -2.2
PTPN22-209ENST00000532224 RPL13AP40429 203 aaKnown RBP1.32□□□□□ -2.2
PTPN22-209ENST00000532224 SYCNQ0VAF6 134 aa1.32□□□□□ -2.2
PTPN22-209ENST00000532224 LYRM7Q5U5X0 104 aa1.32□□□□□ -2.2
PTPN22-209ENST00000532224 SLC25A34Q6PIV7 304 aa1.32□□□□□ -2.2
PTPN22-209ENST00000532224 LINC00518Q8N0U6 118 aa1.32□□□□□ -2.2
PTPN22-209ENST00000532224 SPACA4Q8TDM5 124 aa1.32□□□□□ -2.2
PTPN22-209ENST00000532224 C7orf33Q8WU49 177 aa1.32□□□□□ -2.2
PTPN22-209ENST00000532224 BAALCQ8WXS3 180 aa1.32□□□□□ -2.2
PTPN22-209ENST00000532224 CST9LQ9H4G1 147 aa1.32□□□□□ -2.2
PTPN22-209ENST00000532224 IGLV1-50A0A075B6I6 118 aa1.31□□□□□ -2.2
PTPN22-209ENST00000532224 TMSB15BA0A087X1C1 80 aa1.31□□□□□ -2.2
PTPN22-209ENST00000532224 HSBP1L1C9JCN9 74 aa1.31□□□□□ -2.2
PTPN22-209ENST00000532224 RTL8CO15255 209 aa1.31□□□□□ -2.2
PTPN22-209ENST00000532224 PSCAO43653 123 aa1.31□□□□□ -2.2
PTPN22-209ENST00000532224 IGKCP01834 107 aa1.31□□□□□ -2.2
PTPN22-209ENST00000532224 ANGP03950 147 aaKnown RBP1.31□□□□□ -2.2
PTPN22-209ENST00000532224 PRSS1P07477 247 aa1.31□□□□□ -2.2
PTPN22-209ENST00000532224 SPAG11BQ08648 103 aa1.31□□□□□ -2.2
PTPN22-209ENST00000532224 MPV17L2Q567V2 206 aa1.31□□□□□ -2.2
PTPN22-209ENST00000532224 ENHOQ6UWT2 76 aa1.31□□□□□ -2.2
PTPN22-209ENST00000532224 Q6ZUT4 128 aa1.31□□□□□ -2.2
PTPN22-209ENST00000532224 WFDC10BQ8IUB3 73 aa1.31□□□□□ -2.2
PTPN22-209ENST00000532224 LINC00337Q8N6G1 96 aa1.31□□□□□ -2.2
PTPN22-209ENST00000532224 C15orf56Q8N910 161 aa1.31□□□□□ -2.2
PTPN22-209ENST00000532224 COX7B2Q8TF08 81 aa1.31□□□□□ -2.2
PTPN22-209ENST00000532224 CHAC1Q9BUX1 264 aa1.31□□□□□ -2.2
PTPN22-209ENST00000532224 PKHD1P08F94 4074 aa1.31□□□□□ -2.2
PTPN22-209ENST00000532224 KMT2AQ03164 3969 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms