RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 HIGD2BQ4VC39 106 aa12.26□□□□□ -0.45
HIPK3-205ENST00000531504 RNASE13Q5GAN3 156 aaKnown RBP12.26□□□□□ -0.45
HIPK3-205ENST00000531504 TEX43Q6ZNM6 134 aa12.26□□□□□ -0.45
HIPK3-205ENST00000531504 AMELXQ99217 191 aa12.26□□□□□ -0.45
HIPK3-205ENST00000531504 MAP1LC3CQ9BXW4 147 aa12.25□□□□□ -0.45
HIPK3-205ENST00000531504 GAGE12HA6NDE8 117 aa12.24□□□□□ -0.45
HIPK3-205ENST00000531504 PMVKQ15126 192 aa12.24□□□□□ -0.45
HIPK3-205ENST00000531504 C2orf88Q9BSF0 95 aa12.24□□□□□ -0.45
HIPK3-205ENST00000531504 ZC2HC1BQ5TFG8 222 aa12.23□□□□□ -0.45
HIPK3-205ENST00000531504 GVQW2A0A096LPI5 108 aaPredicted RBP12.22□□□□□ -0.45
HIPK3-205ENST00000531504 CST9LQ9H4G1 147 aa12.22□□□□□ -0.45
HIPK3-205ENST00000531504 TRAV12-1A0A0B4J245 112 aa12.21□□□□□ -0.45
HIPK3-205ENST00000531504 IGKV3OR2-268A0A0C4DH90 116 aa12.21□□□□□ -0.45
HIPK3-205ENST00000531504 KRTAP9-6A0A140TA67 174 aa12.21□□□□□ -0.45
HIPK3-205ENST00000531504 SYS1-DBNDD2H3BUS1 97 aa12.2□□□□□ -0.46
HIPK3-205ENST00000531504 C3orf79P0CE67 100 aa12.2□□□□□ -0.46
HIPK3-205ENST00000531504 KRTDAPP60985 99 aa12.2□□□□□ -0.46
HIPK3-205ENST00000531504 PSORS1C2Q9UIG4 136 aa12.2□□□□□ -0.46
HIPK3-205ENST00000531504 TRAV13-1A0A0B4J241 112 aa12.19□□□□□ -0.46
HIPK3-205ENST00000531504 LINC00959A0A1B0GUT2 108 aa12.19□□□□□ -0.46
HIPK3-205ENST00000531504 H0Y8G0 127 aa12.19□□□□□ -0.46
HIPK3-205ENST00000531504 CCL25O15444 150 aa12.19□□□□□ -0.46
HIPK3-205ENST00000531504 UBE2D1P51668 147 aa12.19□□□□□ -0.46
HIPK3-205ENST00000531504 SS18Q15532 418 aa12.19□□□□□ -0.46
HIPK3-205ENST00000531504 PET117Q6UWS5 81 aa12.18□□□□□ -0.46
HIPK3-205ENST00000531504 OR10D4PQ8NGN7 298 aa12.18□□□□□ -0.46
HIPK3-205ENST00000531504 CHTOPQ9Y3Y2 248 aaKnown RBP12.18□□□□□ -0.46
HIPK3-205ENST00000531504 MUC2Q02817 5179 aa12.17□□□□□ -0.46
HIPK3-205ENST00000531504 FAM19A3Q7Z5A8 133 aa12.17□□□□□ -0.46
HIPK3-205ENST00000531504 CHCHD10Q8WYQ3 142 aaPredicted RBP12.16□□□□□ -0.46
HIPK3-205ENST00000531504 F8VRH5 84 aa12.15□□□□□ -0.46
HIPK3-205ENST00000531504 SEC11AP67812 179 aa12.15□□□□□ -0.46
HIPK3-205ENST00000531504 LINC00242Q5T6M2 205 aa12.15□□□□□ -0.46
HIPK3-205ENST00000531504 IGLC3P0DOY3 106 aa12.14□□□□□ -0.47
HIPK3-205ENST00000531504 LINC01545Q5VT33 79 aa12.14□□□□□ -0.47
HIPK3-205ENST00000531504 CARD19Q96LW7 228 aa12.14□□□□□ -0.47
HIPK3-205ENST00000531504 MRPL35Q9NZE8 188 aaKnown RBP12.14□□□□□ -0.47
HIPK3-205ENST00000531504 IGLV4-69A0A075B6H9 119 aa12.13□□□□□ -0.47
HIPK3-205ENST00000531504 TINCRA0A1B0GVN0 87 aa12.13□□□□□ -0.47
HIPK3-205ENST00000531504 C20orf202A1L168 122 aa12.13□□□□□ -0.47
HIPK3-205ENST00000531504 XCL1P47992 114 aa12.12□□□□□ -0.47
HIPK3-205ENST00000531504 HERVK_113P63121 156 aa12.12□□□□□ -0.47
HIPK3-205ENST00000531504 GEMIN7Q9H840 131 aaKnown RBP12.12□□□□□ -0.47
HIPK3-205ENST00000531504 CD164L2Q6UWJ8 174 aa12.11□□□□□ -0.47
HIPK3-205ENST00000531504 PMCHL2Q9BQD1 86 aa12.11□□□□□ -0.47
HIPK3-205ENST00000531504 DPM2O94777 84 aa12.1□□□□□ -0.47
HIPK3-205ENST00000531504 PLNP26678 52 aa12.1□□□□□ -0.47
HIPK3-205ENST00000531504 C11orf86A6NJI1 115 aa12.09□□□□□ -0.47
HIPK3-205ENST00000531504 IGKCP01834 107 aa12.09□□□□□ -0.47
HIPK3-205ENST00000531504 AKR1D1P51857 326 aa12.09□□□□□ -0.47
HIPK3-205ENST00000531504 PTTG1IPP53801 180 aa12.09□□□□□ -0.47
HIPK3-205ENST00000531504 FOXI1Q12951 378 aa12.09□□□□□ -0.47
HIPK3-205ENST00000531504 PRR26Q8N8Z3 221 aa12.09□□□□□ -0.47
HIPK3-205ENST00000531504 IGLV5-45A0A087WSX0 123 aa12.08□□□□□ -0.48
HIPK3-205ENST00000531504 IGHV3OR16-9A0A0B4J2B5 98 aa12.08□□□□□ -0.48
HIPK3-205ENST00000531504 IGHV1-58A0A0C4DH39 117 aa12.08□□□□□ -0.48
HIPK3-205ENST00000531504 PRR4Q16378 134 aa12.08□□□□□ -0.48
HIPK3-205ENST00000531504 LOC105371267A0A1B0GV96 52 aa12.07□□□□□ -0.48
HIPK3-205ENST00000531504 SCGB1D1O95968 90 aa12.07□□□□□ -0.48
HIPK3-205ENST00000531504 LINC00469Q8N7U9 141 aa12.07□□□□□ -0.48
HIPK3-205ENST00000531504 DIRC1Q969H9 104 aa12.07□□□□□ -0.48
HIPK3-205ENST00000531504 ZNF561-AS1K7EIQ3 104 aa12.06□□□□□ -0.48
HIPK3-205ENST00000531504 ZNF22P17026 224 aaPredicted RBP12.06□□□□□ -0.48
HIPK3-205ENST00000531504 SYCNQ0VAF6 134 aa12.06□□□□□ -0.48
HIPK3-205ENST00000531504 JOSD1Q15040 202 aaPredicted RBP12.06□□□□□ -0.48
HIPK3-205ENST00000531504 LINC00526Q96FQ7 95 aa12.06□□□□□ -0.48
HIPK3-205ENST00000531504 CDKN2A-AS1Q9UH64 79 aa12.06□□□□□ -0.48
HIPK3-205ENST00000531504 A0A087WZ39 114 aa12.05□□□□□ -0.48
HIPK3-205ENST00000531504 LOC107984640A0A0U1RRK4 108 aa12.05□□□□□ -0.48
HIPK3-205ENST00000531504 H3BRM9 83 aa12.05□□□□□ -0.48
HIPK3-205ENST00000531504 COX7A2LO14548 114 aa12.05□□□□□ -0.48
HIPK3-205ENST00000531504 GAGE2BQ13066 116 aa12.05□□□□□ -0.48
HIPK3-205ENST00000531504 C1orf137Q5JT78 98 aa12.05□□□□□ -0.48
HIPK3-205ENST00000531504 TMEM170BQ5T4T1 132 aa12.05□□□□□ -0.48
HIPK3-205ENST00000531504 C5orf38Q86SI9 138 aa12.05□□□□□ -0.48
HIPK3-205ENST00000531504 LCE2AQ5TA79 106 aaPredicted RBP12.04□□□□□ -0.48
HIPK3-205ENST00000531504 LINC01561Q8N1V8 128 aa12.04□□□□□ -0.48
HIPK3-205ENST00000531504 IGLV1-50A0A075B6I6 118 aa12.02□□□□□ -0.49
HIPK3-205ENST00000531504 MALP21145 153 aa12.02□□□□□ -0.49
HIPK3-205ENST00000531504 A0A1W2PNN7 141 aa12.01□□□□□ -0.49
HIPK3-205ENST00000531504 ATOH7Q8N100 152 aa12.01□□□□□ -0.49
HIPK3-205ENST00000531504 FAT4Q6V0I7 4981 aa12.01□□□□□ -0.49
HIPK3-205ENST00000531504 TMEM223A0PJW6 202 aa12□□□□□ -0.49
HIPK3-205ENST00000531504 APOMO95445 188 aa12□□□□□ -0.49
HIPK3-205ENST00000531504 PYY3Q5JQD4 70 aa12□□□□□ -0.49
HIPK3-205ENST00000531504 SMIM1B2RUZ4 78 aa11.99□□□□□ -0.49
HIPK3-205ENST00000531504 IGLV7-43P04211 117 aa11.99□□□□□ -0.49
HIPK3-205ENST00000531504 SPINK8P0C7L1 97 aa11.99□□□□□ -0.49
HIPK3-205ENST00000531504 HERVK_113P61574 105 aa11.99□□□□□ -0.49
HIPK3-205ENST00000531504 C9orf116Q5BN46 136 aaPredicted RBP11.99□□□□□ -0.49
HIPK3-205ENST00000531504 H0Y9J4 135 aa11.98□□□□□ -0.49
HIPK3-205ENST00000531504 IGLV5-39A0A0G2JS06 123 aa11.96□□□□□ -0.49
HIPK3-205ENST00000531504 ORAOV1Q8WV07 137 aa11.96□□□□□ -0.49
HIPK3-205ENST00000531504 RPL13AP40429 203 aaKnown RBP11.95□□□□□ -0.5
HIPK3-205ENST00000531504 PHF5AQ7RTV0 110 aaKnown RBP11.95□□□□□ -0.5
HIPK3-205ENST00000531504 HSBP1L1C9JCN9 74 aa11.94□□□□□ -0.5
HIPK3-205ENST00000531504 RPL18AQ02543 176 aaKnown RBP11.94□□□□□ -0.5
HIPK3-205ENST00000531504 E9PLD3 99 aa11.93□□□□□ -0.5
HIPK3-205ENST00000531504 LEPROTO15243 131 aa11.93□□□□□ -0.5
HIPK3-205ENST00000531504 SPAG11BQ08648 103 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms