RNA–Protein interactions for RNA: ENST00000530981.1

SF3B2-210, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-210ENST00000530981 ZNF22P17026 224 aaPredicted RBP5.78□□□□□ -1.48
SF3B2-210ENST00000530981 HNRNPA3P51991 378 aaKnown RBP5.78□□□□□ -1.48
SF3B2-210ENST00000530981 PAPPA-AS1Q5QFB9 102 aa5.78□□□□□ -1.48
SF3B2-210ENST00000530981 LINC01561Q8N1V8 128 aa5.78□□□□□ -1.48
SF3B2-210ENST00000530981 LINC00469Q8N7U9 141 aa5.78□□□□□ -1.48
SF3B2-210ENST00000530981 GEMIN7Q9H840 131 aaKnown RBP5.78□□□□□ -1.48
SF3B2-210ENST00000530981 MRPL35Q9NZE8 188 aaKnown RBP5.78□□□□□ -1.48
SF3B2-210ENST00000530981 PLAC8Q9NZF1 115 aa5.78□□□□□ -1.48
SF3B2-210ENST00000530981 LRP1Q07954 4544 aaKnown RBP5.77□□□□□ -1.49
SF3B2-210ENST00000530981 FAM168BA1KXE4 195 aa5.77□□□□□ -1.49
SF3B2-210ENST00000530981 LINC01549A6NIU2 74 aa5.77□□□□□ -1.49
SF3B2-210ENST00000530981 HSBP1O75506 76 aa5.77□□□□□ -1.49
SF3B2-210ENST00000530981 PTTG1IPP53801 180 aa5.77□□□□□ -1.49
SF3B2-210ENST00000530981 GAGE2BQ13066 116 aa5.77□□□□□ -1.49
SF3B2-210ENST00000530981 MAJINQ3KP22 176 aa5.77□□□□□ -1.49
SF3B2-210ENST00000530981 Q6ZRP5 223 aa5.77□□□□□ -1.49
SF3B2-210ENST00000530981 IFI27L1Q96BM0 104 aa5.77□□□□□ -1.49
SF3B2-210ENST00000530981 TOMM7Q9P0U1 55 aa5.77□□□□□ -1.49
SF3B2-210ENST00000530981 IGLV5-39A0A0G2JS06 123 aa5.76□□□□□ -1.49
SF3B2-210ENST00000530981 NDUFA1O15239 70 aa5.76□□□□□ -1.49
SF3B2-210ENST00000530981 ATP5LO75964 103 aa5.76□□□□□ -1.49
SF3B2-210ENST00000530981 KRTAP11-1Q8IUC1 163 aa5.76□□□□□ -1.49
SF3B2-210ENST00000530981 STPG4Q8N801 248 aa5.76□□□□□ -1.49
SF3B2-210ENST00000530981 LOC107984640A0A0U1RRK4 108 aa5.75□□□□□ -1.49
SF3B2-210ENST00000530981 FABP4P15090 132 aa5.75□□□□□ -1.49
SF3B2-210ENST00000530981 ODF1Q14990 250 aa5.75□□□□□ -1.49
SF3B2-210ENST00000530981 RNF151Q2KHN1 245 aa5.75□□□□□ -1.49
SF3B2-210ENST00000530981 C9orf129Q5T035 196 aaKnown RBP5.75□□□□□ -1.49
SF3B2-210ENST00000530981 Q8IZM0 81 aa5.75□□□□□ -1.49
SF3B2-210ENST00000530981 CHTOPQ9Y3Y2 248 aaKnown RBP5.75□□□□□ -1.49
SF3B2-210ENST00000530981 TRAV12-1A0A0B4J245 112 aa5.74□□□□□ -1.49
SF3B2-210ENST00000530981 TLX1NBP0CAT3 122 aa5.74□□□□□ -1.49
SF3B2-210ENST00000530981 SEC11AP67812 179 aa5.74□□□□□ -1.49
SF3B2-210ENST00000530981 RPL18AQ02543 176 aaKnown RBP5.74□□□□□ -1.49
SF3B2-210ENST00000530981 C6orf226Q5I0X4 101 aa5.74□□□□□ -1.49
SF3B2-210ENST00000530981 COX7B2Q8TF08 81 aa5.74□□□□□ -1.49
SF3B2-210ENST00000530981 DPH3Q96FX2 82 aa5.74□□□□□ -1.49
SF3B2-210ENST00000530981 PMCHL2Q9BQD1 86 aa5.74□□□□□ -1.49
SF3B2-210ENST00000530981 FAT3Q8TDW7 4589 aa5.73□□□□□ -1.49
SF3B2-210ENST00000530981 F8WDY8 70 aa5.73□□□□□ -1.49
SF3B2-210ENST00000530981 H0Y8G0 127 aa5.73□□□□□ -1.49
SF3B2-210ENST00000530981 LEPROTL1O95214 131 aa5.73□□□□□ -1.49
SF3B2-210ENST00000530981 S100A1P23297 94 aa5.73□□□□□ -1.49
SF3B2-210ENST00000530981 GAGE2EQ4V326 116 aa5.73□□□□□ -1.49
SF3B2-210ENST00000530981 PACRGQ96M98 296 aaPredicted RBP5.73□□□□□ -1.49
SF3B2-210ENST00000530981 GAGE2DQ9UEU5 116 aa5.73□□□□□ -1.49
SF3B2-210ENST00000530981 TRBV30A0A0K0K1B3 111 aa5.72□□□□□ -1.49
SF3B2-210ENST00000530981 TMEM223A0PJW6 202 aa5.72□□□□□ -1.49
SF3B2-210ENST00000530981 F8VRH5 84 aa5.72□□□□□ -1.49
SF3B2-210ENST00000530981 FAM229AH3BQW9 127 aa5.72□□□□□ -1.49
SF3B2-210ENST00000530981 INAFM2P0DMQ5 153 aa5.72□□□□□ -1.49
SF3B2-210ENST00000530981 COA6Q5JTJ3 125 aaKnown RBP5.72□□□□□ -1.49
SF3B2-210ENST00000530981 PHF5AQ7RTV0 110 aaKnown RBP5.72□□□□□ -1.49
SF3B2-210ENST00000530981 PRSS2P07478 247 aa5.71□□□□□ -1.5
SF3B2-210ENST00000530981 TSPEAR-AS2P59090 65 aa5.71□□□□□ -1.5
SF3B2-210ENST00000530981 CKS1BP61024 79 aa5.71□□□□□ -1.5
SF3B2-210ENST00000530981 TMEM170BQ5T4T1 132 aa5.71□□□□□ -1.5
SF3B2-210ENST00000530981 SERTAD4-AS1Q5TG53 156 aa5.71□□□□□ -1.5
SF3B2-210ENST00000530981 XAGE1AQ9HD64 81 aa5.71□□□□□ -1.5
SF3B2-210ENST00000530981 NDUFC2-KCTD14E9PQ53 114 aa5.7□□□□□ -1.5
SF3B2-210ENST00000530981 ZNF625Q96I27 306 aaPredicted RBP5.7□□□□□ -1.5
SF3B2-210ENST00000530981 H3BRM9 83 aa5.69□□□□□ -1.5
SF3B2-210ENST00000530981 RPL37AP61513 92 aaKnown RBP5.69□□□□□ -1.5
SF3B2-210ENST00000530981 Q8NDZ9 215 aa5.69□□□□□ -1.5
SF3B2-210ENST00000530981 SYS1-DBNDD2H3BUS1 97 aa5.68□□□□□ -1.5
SF3B2-210ENST00000530981 PLA2G1BP04054 148 aaKnown RBP5.68□□□□□ -1.5
SF3B2-210ENST00000530981 PRR3P79522 188 aaKnown RBP5.68□□□□□ -1.5
SF3B2-210ENST00000530981 FAM19A5Q7Z5A7 132 aaPredicted RBP5.68□□□□□ -1.5
SF3B2-210ENST00000530981 LINC00474Q9P2X8 69 aa5.68□□□□□ -1.5
SF3B2-210ENST00000530981 HSPB8Q9UJY1 196 aa5.68□□□□□ -1.5
SF3B2-210ENST00000530981 HERC1Q15751 4861 aa5.68□□□□□ -1.5
SF3B2-210ENST00000530981 C3orf79P0CE67 100 aa5.67□□□□□ -1.5
SF3B2-210ENST00000530981 PFN2P35080 140 aa5.67□□□□□ -1.5
SF3B2-210ENST00000530981 CXCL5P42830 114 aa5.66□□□□□ -1.5
SF3B2-210ENST00000530981 LINC01545Q5VT33 79 aa5.66□□□□□ -1.5
SF3B2-210ENST00000530981 PSORS1C2Q9UIG4 136 aa5.66□□□□□ -1.5
SF3B2-210ENST00000530981 DMBT1Q9UGM3 2413 aaPredicted RBP5.66□□□□□ -1.5
SF3B2-210ENST00000530981 A0A0U1RRA0 63 aa5.65□□□□□ -1.5
SF3B2-210ENST00000530981 DPM2O94777 84 aa5.65□□□□□ -1.5
SF3B2-210ENST00000530981 SRSF9Q13242 221 aaKnown RBP eCLIP5.65□□□□□ -1.5
SF3B2-210ENST00000530981 MAP1LC3CQ9BXW4 147 aa5.65□□□□□ -1.5
SF3B2-210ENST00000530981 ERG28Q9UKR5 140 aa5.65□□□□□ -1.5
SF3B2-210ENST00000530981 TNXBP22105 4242 aa5.64□□□□□ -1.51
SF3B2-210ENST00000530981 IGKCP01834 107 aa5.64□□□□□ -1.51
SF3B2-210ENST00000530981 HIST3H2BBQ8N257 126 aa5.64□□□□□ -1.51
SF3B2-210ENST00000530981 SND1-IT1Q9HBX3 110 aa5.64□□□□□ -1.51
SF3B2-210ENST00000530981 PKIGQ9Y2B9 76 aa5.64□□□□□ -1.51
SF3B2-210ENST00000530981 C22orf24Q9Y442 160 aa5.64□□□□□ -1.51
SF3B2-210ENST00000530981 IGKV2D-26A0A0A0MRZ7 120 aa5.63□□□□□ -1.51
SF3B2-210ENST00000530981 M0QXV9 152 aa5.63□□□□□ -1.51
SF3B2-210ENST00000530981 LEPROTO15243 131 aa5.63□□□□□ -1.51
SF3B2-210ENST00000530981 EIF4EBP3O60516 100 aaPredicted RBP5.63□□□□□ -1.51
SF3B2-210ENST00000530981 SMIM13P0DJ93 91 aa5.63□□□□□ -1.51
SF3B2-210ENST00000530981 PLNP26678 52 aa5.63□□□□□ -1.51
SF3B2-210ENST00000530981 KRTDAPP60985 99 aa5.63□□□□□ -1.51
SF3B2-210ENST00000530981 C7orf33Q8WU49 177 aa5.63□□□□□ -1.51
SF3B2-210ENST00000530981 HIST1H2BLQ99880 126 aa5.63□□□□□ -1.51
SF3B2-210ENST00000530981 TTTY13Q9BZ97 58 aa5.63□□□□□ -1.51
SF3B2-210ENST00000530981 PET117Q6UWS5 81 aa5.62□□□□□ -1.51
SF3B2-210ENST00000530981 NDUFA12Q9UI09 145 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 193.2 ms