RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 TMEM223A0PJW6 202 aa10.3□□□□□ -0.76
BRK1-201ENST00000530758 H0Y8G0 127 aa10.3□□□□□ -0.76
BRK1-201ENST00000530758 CDK2AP2O75956 126 aa10.3□□□□□ -0.76
BRK1-201ENST00000530758 C3orf79P0CE67 100 aa10.3□□□□□ -0.76
BRK1-201ENST00000530758 C6orf226Q5I0X4 101 aa10.3□□□□□ -0.76
BRK1-201ENST00000530758 LINC01545Q5VT33 79 aa10.3□□□□□ -0.76
BRK1-201ENST00000530758 COX7B2Q8TF08 81 aa10.3□□□□□ -0.76
BRK1-201ENST00000530758 DPM2O94777 84 aa10.29□□□□□ -0.76
BRK1-201ENST00000530758 PRSS2P07478 247 aa10.29□□□□□ -0.76
BRK1-201ENST00000530758 CXCL5P42830 114 aa10.29□□□□□ -0.76
BRK1-201ENST00000530758 SNRPEP62304 92 aaKnown RBP10.29□□□□□ -0.76
BRK1-201ENST00000530758 C10orf25Q5T742 122 aa10.29□□□□□ -0.76
BRK1-201ENST00000530758 UNQ6190/PRO20217Q6UXQ8 127 aa10.29□□□□□ -0.76
BRK1-201ENST00000530758 HIST1H2BLQ99880 126 aa10.29□□□□□ -0.76
BRK1-201ENST00000530758 TOMM7Q9P0U1 55 aa10.29□□□□□ -0.76
BRK1-201ENST00000530758 TRBV30A0A0K0K1B3 111 aa10.28□□□□□ -0.76
BRK1-201ENST00000530758 IGKCP01834 107 aa10.28□□□□□ -0.76
BRK1-201ENST00000530758 CIRBPQ14011 172 aaKnown RBP10.28□□□□□ -0.76
BRK1-201ENST00000530758 FAM30AQ9NZY2 134 aa10.28□□□□□ -0.76
BRK1-201ENST00000530758 PKIGQ9Y2B9 76 aa10.28□□□□□ -0.76
BRK1-201ENST00000530758 TLX1NBP0CAT3 122 aa10.27□□□□□ -0.77
BRK1-201ENST00000530758 S100A2P29034 98 aa10.27□□□□□ -0.77
BRK1-201ENST00000530758 CKS1BP61024 79 aa10.27□□□□□ -0.77
BRK1-201ENST00000530758 C2orf82Q6UX34 121 aa10.27□□□□□ -0.77
BRK1-201ENST00000530758 C6orf48Q9UBA6 75 aa10.27□□□□□ -0.77
BRK1-201ENST00000530758 XGP55808 180 aa10.26□□□□□ -0.77
BRK1-201ENST00000530758 PMCHL2Q9BQD1 86 aa10.26□□□□□ -0.77
BRK1-201ENST00000530758 LOC107984640A0A0U1RRK4 108 aa10.25□□□□□ -0.77
BRK1-201ENST00000530758 KRTDAPP60985 99 aa10.24□□□□□ -0.77
BRK1-201ENST00000530758 SFTA2Q6UW10 78 aa10.23□□□□□ -0.77
BRK1-201ENST00000530758 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.23□□□□□ -0.77
BRK1-201ENST00000530758 PANO1I0J062 215 aa10.22□□□□□ -0.77
BRK1-201ENST00000530758 AKR1D1P51857 326 aa10.22□□□□□ -0.77
BRK1-201ENST00000530758 SPACA4Q8TDM5 124 aa10.22□□□□□ -0.77
BRK1-201ENST00000530758 LINC00474Q9P2X8 69 aa10.22□□□□□ -0.77
BRK1-201ENST00000530758 A0A096LNI7 61 aa10.21□□□□□ -0.77
BRK1-201ENST00000530758 PTTG1IPP53801 180 aa10.21□□□□□ -0.77
BRK1-201ENST00000530758 ZNF625Q96I27 306 aaPredicted RBP10.21□□□□□ -0.77
BRK1-201ENST00000530758 C20orf202A1L168 122 aa10.2□□□□□ -0.78
BRK1-201ENST00000530758 NDUFC2-KCTD14E9PQ53 114 aa10.2□□□□□ -0.78
BRK1-201ENST00000530758 LEPROTO15243 131 aa10.2□□□□□ -0.78
BRK1-201ENST00000530758 EPM2AB3EWF7 344 aa10.19□□□□□ -0.78
BRK1-201ENST00000530758 HERVK_113P61574 105 aa10.19□□□□□ -0.78
BRK1-201ENST00000530758 C9orf116Q5BN46 136 aaPredicted RBP10.19□□□□□ -0.78
BRK1-201ENST00000530758 Q6ZRP5 223 aa10.19□□□□□ -0.78
BRK1-201ENST00000530758 CIRBP-AS1Q8TBR5 109 aa10.19□□□□□ -0.78
BRK1-201ENST00000530758 PLEKHB2Q96CS7 222 aa10.19□□□□□ -0.78
BRK1-201ENST00000530758 E9PLD3 99 aa10.18□□□□□ -0.78
BRK1-201ENST00000530758 CHTF8P0CG12 524 aa10.18□□□□□ -0.78
BRK1-201ENST00000530758 SCXQ7RTU7 201 aa10.18□□□□□ -0.78
BRK1-201ENST00000530758 FAT1Q14517 4588 aa10.18□□□□□ -0.78
BRK1-201ENST00000530758 COX17Q14061 63 aa10.17□□□□□ -0.78
BRK1-201ENST00000530758 PLAC8Q9NZF1 115 aa10.17□□□□□ -0.78
BRK1-201ENST00000530758 A0A087WYN8 130 aa10.16□□□□□ -0.78
BRK1-201ENST00000530758 IGKV2-24A0A0C4DH68 120 aa10.16□□□□□ -0.78
BRK1-201ENST00000530758 J3QQQ9 107 aa10.16□□□□□ -0.78
BRK1-201ENST00000530758 GAGE2BQ13066 116 aa10.16□□□□□ -0.78
BRK1-201ENST00000530758 TSPEAR-AS2P59090 65 aa10.15□□□□□ -0.78
BRK1-201ENST00000530758 HERV-K104P63124 156 aa10.15□□□□□ -0.78
BRK1-201ENST00000530758 RPL18AQ02543 176 aaKnown RBP10.15□□□□□ -0.78
BRK1-201ENST00000530758 MAJINQ3KP22 176 aa10.15□□□□□ -0.78
BRK1-201ENST00000530758 STPG4Q8N801 248 aa10.15□□□□□ -0.78
BRK1-201ENST00000530758 NMUP48645 174 aa10.14□□□□□ -0.79
BRK1-201ENST00000530758 Q8N1X5 172 aa10.14□□□□□ -0.79
BRK1-201ENST00000530758 NDUFA12Q9UI09 145 aa10.14□□□□□ -0.79
BRK1-201ENST00000530758 ERG28Q9UKR5 140 aa10.14□□□□□ -0.79
BRK1-201ENST00000530758 MYMXA0A1B0GTQ4 84 aa10.13□□□□□ -0.79
BRK1-201ENST00000530758 DPH3Q96FX2 82 aa10.13□□□□□ -0.79
BRK1-201ENST00000530758 GAGE2EQ4V326 116 aa10.12□□□□□ -0.79
BRK1-201ENST00000530758 GAGE2DQ9UEU5 116 aa10.12□□□□□ -0.79
BRK1-201ENST00000530758 A0A1W2PNN7 141 aa10.11□□□□□ -0.79
BRK1-201ENST00000530758 LINC00587B1AMM8 73 aa10.11□□□□□ -0.79
BRK1-201ENST00000530758 LGALS3P17931 250 aaKnown RBP10.11□□□□□ -0.79
BRK1-201ENST00000530758 HAMPP81172 84 aa10.11□□□□□ -0.79
BRK1-201ENST00000530758 C9orf129Q5T035 196 aaKnown RBP10.11□□□□□ -0.79
BRK1-201ENST00000530758 VPS13BQ7Z7G8 4022 aa10.1□□□□□ -0.79
BRK1-201ENST00000530758 IGKV2D-26A0A0A0MRZ7 120 aa10.1□□□□□ -0.79
BRK1-201ENST00000530758 TMA7Q9Y2S6 64 aaKnown RBP10.1□□□□□ -0.79
BRK1-201ENST00000530758 PFN2P35080 140 aa10.09□□□□□ -0.79
BRK1-201ENST00000530758 ATOH7Q8N100 152 aa10.09□□□□□ -0.79
BRK1-201ENST00000530758 ANKRD39Q53RE8 183 aa10.08□□□□□ -0.8
BRK1-201ENST00000530758 KRTAP7-1Q8IUC3 87 aa10.08□□□□□ -0.8
BRK1-201ENST00000530758 PLA2G2DQ9UNK4 145 aa10.08□□□□□ -0.8
BRK1-201ENST00000530758 SCGB1D1O95968 90 aa10.07□□□□□ -0.8
BRK1-201ENST00000530758 JOSD1Q15040 202 aaPredicted RBP10.07□□□□□ -0.8
BRK1-201ENST00000530758 XAGE1AQ9HD64 81 aa10.07□□□□□ -0.8
BRK1-201ENST00000530758 SMR3BP02814 79 aaPredicted RBP10.06□□□□□ -0.8
BRK1-201ENST00000530758 SMIM13P0DJ93 91 aa10.06□□□□□ -0.8
BRK1-201ENST00000530758 SND1-IT1Q9HBX3 110 aa10.06□□□□□ -0.8
BRK1-201ENST00000530758 FAM168BA1KXE4 195 aa10.05□□□□□ -0.8
BRK1-201ENST00000530758 LINC00158P58513 81 aa10.05□□□□□ -0.8
BRK1-201ENST00000530758 MEIG1Q5JSS6 88 aa10.05□□□□□ -0.8
BRK1-201ENST00000530758 LOC107984156A0A0G2JMH3 177 aa10.04□□□□□ -0.8
BRK1-201ENST00000530758 A0A0J9YXY3 114 aa10.04□□□□□ -0.8
BRK1-201ENST00000530758 ARL17AQ8IVW1 177 aa10.04□□□□□ -0.8
BRK1-201ENST00000530758 IGLV5-37A0A075B6J1 123 aa10.03□□□□□ -0.8
BRK1-201ENST00000530758 HSBP1L1C9JCN9 74 aa10.03□□□□□ -0.8
BRK1-201ENST00000530758 LINC00528Q8N1L1 170 aa10.03□□□□□ -0.8
BRK1-201ENST00000530758 ZNF815PA8K554 130 aa10.02□□□□□ -0.81
BRK1-201ENST00000530758 FAM229AH3BQW9 127 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms