RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.03□□□□□ -1.28
CAPN1-218ENST00000530442 IGLV5-39A0A0G2JS06 123 aa7.02□□□□□ -1.29
CAPN1-218ENST00000530442 PRSS2P07478 247 aa7.02□□□□□ -1.29
CAPN1-218ENST00000530442 CHTF8P0CG12 524 aa7.02□□□□□ -1.29
CAPN1-218ENST00000530442 COX7B2Q8TF08 81 aa7.02□□□□□ -1.29
CAPN1-218ENST00000530442 PMCHL2Q9BQD1 86 aa7.02□□□□□ -1.29
CAPN1-218ENST00000530442 MAP1LC3CQ9BXW4 147 aa7.02□□□□□ -1.29
CAPN1-218ENST00000530442 A0A096LNI7 61 aa7.01□□□□□ -1.29
CAPN1-218ENST00000530442 TMEM223A0PJW6 202 aa7.01□□□□□ -1.29
CAPN1-218ENST00000530442 SYS1-DBNDD2H3BUS1 97 aa7.01□□□□□ -1.29
CAPN1-218ENST00000530442 CIRBPQ14011 172 aaKnown RBP7.01□□□□□ -1.29
CAPN1-218ENST00000530442 SCXQ7RTU7 201 aa7.01□□□□□ -1.29
CAPN1-218ENST00000530442 HIST3H2BBQ8N257 126 aa7.01□□□□□ -1.29
CAPN1-218ENST00000530442 SPACA4Q8TDM5 124 aa7.01□□□□□ -1.29
CAPN1-218ENST00000530442 VPS13BQ7Z7G8 4022 aa7□□□□□ -1.29
CAPN1-218ENST00000530442 IGKV2-24A0A0C4DH68 120 aa7□□□□□ -1.29
CAPN1-218ENST00000530442 C3orf79P0CE67 100 aa7□□□□□ -1.29
CAPN1-218ENST00000530442 PLNP26678 52 aa7□□□□□ -1.29
CAPN1-218ENST00000530442 CXCL5P42830 114 aa7□□□□□ -1.29
CAPN1-218ENST00000530442 RNF151Q2KHN1 245 aa7□□□□□ -1.29
CAPN1-218ENST00000530442 C6orf226Q5I0X4 101 aa7□□□□□ -1.29
CAPN1-218ENST00000530442 TRBV30A0A0K0K1B3 111 aa6.99□□□□□ -1.29
CAPN1-218ENST00000530442 LOC107984640A0A0U1RRK4 108 aa6.99□□□□□ -1.29
CAPN1-218ENST00000530442 DPM2O94777 84 aa6.99□□□□□ -1.29
CAPN1-218ENST00000530442 S100A6P06703 90 aa6.99□□□□□ -1.29
CAPN1-218ENST00000530442 CKS1BP61024 79 aa6.99□□□□□ -1.29
CAPN1-218ENST00000530442 CIRBP-AS1Q8TBR5 109 aa6.99□□□□□ -1.29
CAPN1-218ENST00000530442 KRTAP17-1Q9BYP8 105 aa6.99□□□□□ -1.29
CAPN1-218ENST00000530442 IGKCP01834 107 aa6.98□□□□□ -1.29
CAPN1-218ENST00000530442 TLX1NBP0CAT3 122 aa6.98□□□□□ -1.29
CAPN1-218ENST00000530442 PTTG1IPP53801 180 aa6.98□□□□□ -1.29
CAPN1-218ENST00000530442 RPL18AQ02543 176 aaKnown RBP6.98□□□□□ -1.29
CAPN1-218ENST00000530442 C9orf116Q5BN46 136 aaPredicted RBP6.98□□□□□ -1.29
CAPN1-218ENST00000530442 LINC01545Q5VT33 79 aa6.98□□□□□ -1.29
CAPN1-218ENST00000530442 PET117Q6UWS5 81 aa6.98□□□□□ -1.29
CAPN1-218ENST00000530442 HIST1H2BLQ99880 126 aa6.98□□□□□ -1.29
CAPN1-218ENST00000530442 PKIGQ9Y2B9 76 aa6.98□□□□□ -1.29
CAPN1-218ENST00000530442 ABCA13Q86UQ4 5058 aa6.98□□□□□ -1.29
CAPN1-218ENST00000530442 KRTDAPP60985 99 aa6.97□□□□□ -1.29
CAPN1-218ENST00000530442 Q6ZRP5 223 aa6.97□□□□□ -1.29
CAPN1-218ENST00000530442 S100A2P29034 98 aa6.96□□□□□ -1.3
CAPN1-218ENST00000530442 SNRPEP62304 92 aaKnown RBP6.96□□□□□ -1.3
CAPN1-218ENST00000530442 GAGE2BQ13066 116 aa6.96□□□□□ -1.3
CAPN1-218ENST00000530442 MAJINQ3KP22 176 aa6.96□□□□□ -1.3
CAPN1-218ENST00000530442 A0A087WYN8 130 aa6.95□□□□□ -1.3
CAPN1-218ENST00000530442 C5orf52A6NGY3 159 aa6.95□□□□□ -1.3
CAPN1-218ENST00000530442 NDUFC2-KCTD14E9PQ53 114 aa6.95□□□□□ -1.3
CAPN1-218ENST00000530442 TSPEAR-AS2P59090 65 aa6.95□□□□□ -1.3
CAPN1-218ENST00000530442 ZNF625Q96I27 306 aaPredicted RBP6.95□□□□□ -1.3
CAPN1-218ENST00000530442 SMR3BP02814 79 aaPredicted RBP6.94□□□□□ -1.3
CAPN1-218ENST00000530442 STPG4Q8N801 248 aa6.94□□□□□ -1.3
CAPN1-218ENST00000530442 PLAC8Q9NZF1 115 aa6.94□□□□□ -1.3
CAPN1-218ENST00000530442 LINC00474Q9P2X8 69 aa6.94□□□□□ -1.3
CAPN1-218ENST00000530442 HERVK_113P61574 105 aa6.93□□□□□ -1.3
CAPN1-218ENST00000530442 GAGE2EQ4V326 116 aa6.93□□□□□ -1.3
CAPN1-218ENST00000530442 Q8N1X5 172 aa6.93□□□□□ -1.3
CAPN1-218ENST00000530442 GAGE2DQ9UEU5 116 aa6.93□□□□□ -1.3
CAPN1-218ENST00000530442 PKHD1L1Q86WI1 4243 aa6.93□□□□□ -1.3
CAPN1-218ENST00000530442 C20orf202A1L168 122 aa6.92□□□□□ -1.3
CAPN1-218ENST00000530442 LEPROTO15243 131 aa6.92□□□□□ -1.3
CAPN1-218ENST00000530442 C9orf129Q5T035 196 aaKnown RBP6.92□□□□□ -1.3
CAPN1-218ENST00000530442 SFTA2Q6UW10 78 aa6.92□□□□□ -1.3
CAPN1-218ENST00000530442 A0A1W2PNN7 141 aa6.91□□□□□ -1.3
CAPN1-218ENST00000530442 FAM168BA1KXE4 195 aa6.91□□□□□ -1.3
CAPN1-218ENST00000530442 EPM2AB3EWF7 344 aa6.91□□□□□ -1.3
CAPN1-218ENST00000530442 E9PLD3 99 aa6.91□□□□□ -1.3
CAPN1-218ENST00000530442 LINC00528Q8N1L1 170 aa6.91□□□□□ -1.3
CAPN1-218ENST00000530442 PLEKHB2Q96CS7 222 aa6.91□□□□□ -1.3
CAPN1-218ENST00000530442 DPH3Q96FX2 82 aa6.91□□□□□ -1.3
CAPN1-218ENST00000530442 ERG28Q9UKR5 140 aa6.91□□□□□ -1.3
CAPN1-218ENST00000530442 J3QQQ9 107 aa6.9□□□□□ -1.3
CAPN1-218ENST00000530442 Q5VSD8 79 aa6.9□□□□□ -1.3
CAPN1-218ENST00000530442 ATOH7Q8N100 152 aa6.9□□□□□ -1.3
CAPN1-218ENST00000530442 KRTAP4-5Q9BYR2 181 aa6.9□□□□□ -1.3
CAPN1-218ENST00000530442 XAGE1AQ9HD64 81 aa6.9□□□□□ -1.3
CAPN1-218ENST00000530442 NDUFA12Q9UI09 145 aa6.9□□□□□ -1.3
CAPN1-218ENST00000530442 PFN2P35080 140 aa6.89□□□□□ -1.31
CAPN1-218ENST00000530442 KRTAP7-1Q8IUC3 87 aa6.89□□□□□ -1.31
CAPN1-218ENST00000530442 TMA7Q9Y2S6 64 aaKnown RBP6.89□□□□□ -1.31
CAPN1-218ENST00000530442 PCLOQ9Y6V0 5065 aa6.89□□□□□ -1.31
CAPN1-218ENST00000530442 IGKV2D-26A0A0A0MRZ7 120 aa6.88□□□□□ -1.31
CAPN1-218ENST00000530442 MYMXA0A1B0GTQ4 84 aa6.88□□□□□ -1.31
CAPN1-218ENST00000530442 LGALS3P17931 250 aaKnown RBP6.88□□□□□ -1.31
CAPN1-218ENST00000530442 HERV-K104P63124 156 aa6.88□□□□□ -1.31
CAPN1-218ENST00000530442 COX17Q14061 63 aa6.88□□□□□ -1.31
CAPN1-218ENST00000530442 FAM19A5Q7Z5A7 132 aaPredicted RBP6.88□□□□□ -1.31
CAPN1-218ENST00000530442 NMUP48645 174 aa6.87□□□□□ -1.31
CAPN1-218ENST00000530442 ANKRD39Q53RE8 183 aa6.87□□□□□ -1.31
CAPN1-218ENST00000530442 MEIG1Q5JSS6 88 aa6.87□□□□□ -1.31
CAPN1-218ENST00000530442 SERTAD4-AS1Q5TG53 156 aa6.87□□□□□ -1.31
CAPN1-218ENST00000530442 A0A0U1RRA0 63 aa6.86□□□□□ -1.31
CAPN1-218ENST00000530442 SMIM13P0DJ93 91 aa6.86□□□□□ -1.31
CAPN1-218ENST00000530442 AKR1D1P51857 326 aa6.86□□□□□ -1.31
CAPN1-218ENST00000530442 KRTAP10-4P60372 401 aaPredicted RBP6.86□□□□□ -1.31
CAPN1-218ENST00000530442 PHF5AQ7RTV0 110 aaKnown RBP6.86□□□□□ -1.31
CAPN1-218ENST00000530442 TTTY13Q9BZ97 58 aa6.86□□□□□ -1.31
CAPN1-218ENST00000530442 FAM229AH3BQW9 127 aa6.85□□□□□ -1.31
CAPN1-218ENST00000530442 M0QXV9 152 aa6.85□□□□□ -1.31
CAPN1-218ENST00000530442 LINC00158P58513 81 aa6.85□□□□□ -1.31
CAPN1-218ENST00000530442 SND1-IT1Q9HBX3 110 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 1663.3 ms