RNA–Protein interactions for RNA: ENST00000530426.1

LTBP3-216, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 431 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-216ENST00000530426 KMT2AQ03164 3969 aa10.01□□□□□ -0.81
LTBP3-216ENST00000530426 SACSQ9NZJ4 4579 aa10□□□□□ -0.81
LTBP3-216ENST00000530426 SLPIP03973 132 aa10□□□□□ -0.81
LTBP3-216ENST00000530426 C10orf25Q5T742 122 aa10□□□□□ -0.81
LTBP3-216ENST00000530426 ZNF625Q96I27 306 aaPredicted RBP10□□□□□ -0.81
LTBP3-216ENST00000530426 NDUFA12Q9UI09 145 aa10□□□□□ -0.81
LTBP3-216ENST00000530426 MYMXA0A1B0GTQ4 84 aa9.99□□□□□ -0.81
LTBP3-216ENST00000530426 SPATA45Q537H7 98 aa9.99□□□□□ -0.81
LTBP3-216ENST00000530426 CDPF1Q6NVV7 123 aa9.99□□□□□ -0.81
LTBP3-216ENST00000530426 CNBPP62633 177 aaKnown RBP9.98□□□□□ -0.81
LTBP3-216ENST00000530426 S100A12P80511 92 aa9.98□□□□□ -0.81
LTBP3-216ENST00000530426 SFTA2Q6UW10 78 aa9.98□□□□□ -0.81
LTBP3-216ENST00000530426 ZNF815PA8K554 130 aa9.97□□□□□ -0.81
LTBP3-216ENST00000530426 KRTAP10-2P60368 255 aa9.97□□□□□ -0.81
LTBP3-216ENST00000530426 TTTY13Q9BZ97 58 aa9.97□□□□□ -0.81
LTBP3-216ENST00000530426 PGPEP1Q9NXJ5 209 aa9.97□□□□□ -0.81
LTBP3-216ENST00000530426 C6orf48Q9UBA6 75 aa9.97□□□□□ -0.81
LTBP3-216ENST00000530426 RYR2Q92736 4967 aa9.96□□□□□ -0.81
LTBP3-216ENST00000530426 TRBV30A0A0K0K1B3 111 aa9.96□□□□□ -0.82
LTBP3-216ENST00000530426 SMIM6P0DI80 62 aa9.96□□□□□ -0.82
LTBP3-216ENST00000530426 HERV-K104P63124 156 aa9.96□□□□□ -0.82
LTBP3-216ENST00000530426 MEIG1Q5JSS6 88 aa9.96□□□□□ -0.82
LTBP3-216ENST00000530426 LINC01620Q4KN68 170 aa9.95□□□□□ -0.82
LTBP3-216ENST00000530426 C9orf116Q5BN46 136 aaPredicted RBP9.95□□□□□ -0.82
LTBP3-216ENST00000530426 PCP2Q8IVA1 136 aa9.95□□□□□ -0.82
LTBP3-216ENST00000530426 PFN2P35080 140 aa9.94□□□□□ -0.82
LTBP3-216ENST00000530426 RNF151Q2KHN1 245 aa9.94□□□□□ -0.82
LTBP3-216ENST00000530426 C9orf163Q8N9P6 203 aa9.94□□□□□ -0.82
LTBP3-216ENST00000530426 A0A0U1RRA0 63 aa9.93□□□□□ -0.82
LTBP3-216ENST00000530426 A0A1B0GVY2 172 aa9.93□□□□□ -0.82
LTBP3-216ENST00000530426 ERG28Q9UKR5 140 aa9.93□□□□□ -0.82
LTBP3-216ENST00000530426 KMT2CQ8NEZ4 4911 aaKnown RBP9.93□□□□□ -0.82
LTBP3-216ENST00000530426 LOC107984640A0A0U1RRK4 108 aa9.92□□□□□ -0.82
LTBP3-216ENST00000530426 GCSHP23434 173 aa9.92□□□□□ -0.82
LTBP3-216ENST00000530426 LINC00158P58513 81 aa9.92□□□□□ -0.82
LTBP3-216ENST00000530426 RPL18AQ02543 176 aaKnown RBP9.92□□□□□ -0.82
LTBP3-216ENST00000530426 SCGB1D4Q6XE38 83 aa9.92□□□□□ -0.82
LTBP3-216ENST00000530426 C14orf144Q96I85 54 aa9.92□□□□□ -0.82
LTBP3-216ENST00000530426 A0A0J9YXY3 114 aa9.91□□□□□ -0.82
LTBP3-216ENST00000530426 LINC00587B1AMM8 73 aa9.91□□□□□ -0.82
LTBP3-216ENST00000530426 COX8AP10176 69 aa9.91□□□□□ -0.82
LTBP3-216ENST00000530426 GAGE2BQ13066 116 aa9.91□□□□□ -0.82
LTBP3-216ENST00000530426 PKIGQ9Y2B9 76 aa9.91□□□□□ -0.82
LTBP3-216ENST00000530426 SMIM13P0DJ93 91 aa9.9□□□□□ -0.82
LTBP3-216ENST00000530426 CIRBPQ14011 172 aaKnown RBP9.9□□□□□ -0.82
LTBP3-216ENST00000530426 DNAH10Q8IVF4 4471 aa9.9□□□□□ -0.83
LTBP3-216ENST00000530426 C16orf90A8MZG2 172 aa9.89□□□□□ -0.83
LTBP3-216ENST00000530426 GAGE2EQ4V326 116 aa9.89□□□□□ -0.83
LTBP3-216ENST00000530426 C12orf57Q99622 126 aa9.89□□□□□ -0.83
LTBP3-216ENST00000530426 GAGE2DQ9UEU5 116 aa9.89□□□□□ -0.83
LTBP3-216ENST00000530426 DNAH2Q9P225 4427 aa9.88□□□□□ -0.83
LTBP3-216ENST00000530426 IGKV2-24A0A0C4DH68 120 aa9.88□□□□□ -0.83
LTBP3-216ENST00000530426 NDUFC2-KCTD14E9PQ53 114 aa9.88□□□□□ -0.83
LTBP3-216ENST00000530426 COX17Q14061 63 aa9.88□□□□□ -0.83
LTBP3-216ENST00000530426 TLX1NBP0CAT3 122 aa9.87□□□□□ -0.83
LTBP3-216ENST00000530426 SLC25A34Q6PIV7 304 aa9.87□□□□□ -0.83
LTBP3-216ENST00000530426 SDIM1Q6ZPB5 146 aa9.87□□□□□ -0.83
LTBP3-216ENST00000530426 Q6ZRP5 223 aa9.87□□□□□ -0.83
LTBP3-216ENST00000530426 BOD1L2Q8IYS8 172 aa9.87□□□□□ -0.83
LTBP3-216ENST00000530426 DPH3Q96FX2 82 aa9.87□□□□□ -0.83
LTBP3-216ENST00000530426 TP73-AS1Q9UF72 201 aa9.87□□□□□ -0.83
LTBP3-216ENST00000530426 DNAH17Q9UFH2 4485 aa9.86□□□□□ -0.83
LTBP3-216ENST00000530426 A0A096LNI7 61 aa9.86□□□□□ -0.83
LTBP3-216ENST00000530426 DLEU1O43261 78 aa9.85□□□□□ -0.83
LTBP3-216ENST00000530426 MIR7-3HGQ8N6C7 128 aa9.85□□□□□ -0.83
LTBP3-216ENST00000530426 DAND5Q8N907 189 aa9.85□□□□□ -0.83
LTBP3-216ENST00000530426 PRO1933Q9H354 126 aa9.85□□□□□ -0.83
LTBP3-216ENST00000530426 TMEM238C9JI98 176 aa9.84□□□□□ -0.83
LTBP3-216ENST00000530426 TIMM17BO60830 172 aa9.84□□□□□ -0.83
LTBP3-216ENST00000530426 CHTF8P0CG12 524 aa9.84□□□□□ -0.83
LTBP3-216ENST00000530426 PTTG1IPP53801 180 aa9.84□□□□□ -0.83
LTBP3-216ENST00000530426 KRTAP10-1P60331 282 aa9.84□□□□□ -0.83
LTBP3-216ENST00000530426 XAGE1AQ9HD64 81 aa9.84□□□□□ -0.83
LTBP3-216ENST00000530426 NPC2P61916 151 aa9.83□□□□□ -0.84
LTBP3-216ENST00000530426 LINC00518Q8N0U6 118 aa9.83□□□□□ -0.84
LTBP3-216ENST00000530426 FRAS1Q86XX4 4008 aa9.82□□□□□ -0.84
LTBP3-216ENST00000530426 ADAMTSL4-AS1Q5T5F5 129 aa9.82□□□□□ -0.84
LTBP3-216ENST00000530426 SND1-IT1Q9HBX3 110 aa9.82□□□□□ -0.84
LTBP3-216ENST00000530426 LINC00474Q9P2X8 69 aa9.82□□□□□ -0.84
LTBP3-216ENST00000530426 UQCR10Q9UDW1 63 aa9.82□□□□□ -0.84
LTBP3-216ENST00000530426 SRSF9Q13242 221 aaKnown RBP eCLIP9.81□□□□□ -0.84
LTBP3-216ENST00000530426 LITAFQ99732 161 aa9.81□□□□□ -0.84
LTBP3-216ENST00000530426 MIEN1Q9BRT3 115 aa9.81□□□□□ -0.84
LTBP3-216ENST00000530426 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.81□□□□□ -0.84
LTBP3-216ENST00000530426 RYR3Q15413 4870 aa9.81□□□□□ -0.84
LTBP3-216ENST00000530426 PANO1I0J062 215 aa9.79□□□□□ -0.84
LTBP3-216ENST00000530426 C9orf129Q5T035 196 aaKnown RBP9.79□□□□□ -0.84
LTBP3-216ENST00000530426 SPANXDQ9BXN6 97 aa9.79□□□□□ -0.84
LTBP3-216ENST00000530426 SPANXCQ9NY87 97 aa9.79□□□□□ -0.84
LTBP3-216ENST00000530426 SPACA4Q8TDM5 124 aa9.78□□□□□ -0.84
LTBP3-216ENST00000530426 HIST1H4GQ99525 98 aa9.78□□□□□ -0.84
LTBP3-216ENST00000530426 FAM30AQ9NZY2 134 aa9.78□□□□□ -0.84
LTBP3-216ENST00000530426 TSTD3H0UI37 97 aa9.77□□□□□ -0.85
LTBP3-216ENST00000530426 HNRNPA3P51991 378 aaKnown RBP9.77□□□□□ -0.85
LTBP3-216ENST00000530426 C2orf91Q6ZV80 131 aa9.77□□□□□ -0.85
LTBP3-216ENST00000530426 FAM19A5Q7Z5A7 132 aaPredicted RBP9.77□□□□□ -0.85
LTBP3-216ENST00000530426 LINC00308Q8TCZ7 52 aa9.77□□□□□ -0.85
LTBP3-216ENST00000530426 SPANXB1Q9NS25 103 aaPredicted RBP9.77□□□□□ -0.85
LTBP3-216ENST00000530426 HIGD1BQ9P298 99 aa9.77□□□□□ -0.85
LTBP3-216ENST00000530426 FAM168BA1KXE4 195 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms