RNA–Protein interactions for RNA: ENST00000529919.5

CTNND1-222, Transcript of catenin delta 1, human

TSL 5 BASIC

Gene CTNND1, Length 4,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-222	ENST00000529919	FAM30A	Q9NZY2	134 aa		5.8	□□□□□ -1.48
CTNND1-222	ENST00000529919	UBE2D3	P61077	147 aa		5.8	□□□□□ -1.48
CTNND1-222	ENST00000529919	UBE2D2	P62837	147 aa		5.8	□□□□□ -1.48
CTNND1-222	ENST00000529919	LY6G6C	O95867	125 aa		5.79	□□□□□ -1.48
CTNND1-222	ENST00000529919	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	5.79	□□□□□ -1.48
CTNND1-222	ENST00000529919	CDC42SE2	Q9NRR3	84 aa		5.79	□□□□□ -1.48
CTNND1-222	ENST00000529919	DHRS4-AS1	Q9P1J3	65 aa		5.79	□□□□□ -1.48
CTNND1-222	ENST00000529919	SERP1	Q9Y6X1	66 aa		5.79	□□□□□ -1.48
CTNND1-222	ENST00000529919	IGHV4-30-4	P0DP06	118 aa		5.79	□□□□□ -1.48
CTNND1-222	ENST00000529919	LINC00208	Q96KT6	92 aa		5.79	□□□□□ -1.48
CTNND1-222	ENST00000529919	WFDC10A	Q9H1F0	79 aa		5.79	□□□□□ -1.48
CTNND1-222	ENST00000529919	RPL37AP8	A6NKH3	93 aa		5.78	□□□□□ -1.48
CTNND1-222	ENST00000529919	NANOS2	P60321	138 aa	Known RBP	5.78	□□□□□ -1.48
CTNND1-222	ENST00000529919		Q8N3U1	123 aa		5.78	□□□□□ -1.48
CTNND1-222	ENST00000529919	TSPEAR-AS2	P59090	65 aa		5.78	□□□□□ -1.48
CTNND1-222	ENST00000529919	CFAP46	Q8IYW2	2715 aa		5.78	□□□□□ -1.48
CTNND1-222	ENST00000529919	CYSRT1	A8MQ03	144 aa		5.78	□□□□□ -1.48
CTNND1-222	ENST00000529919	SMIM1	B2RUZ4	78 aa		5.77	□□□□□ -1.49
CTNND1-222	ENST00000529919		Q8IZM0	81 aa		5.77	□□□□□ -1.49
CTNND1-222	ENST00000529919		A0A096LNJ9	63 aa		5.77	□□□□□ -1.49
CTNND1-222	ENST00000529919		Q8N6K4	173 aa		5.77	□□□□□ -1.49
CTNND1-222	ENST00000529919	IGLV4-69	A0A075B6H9	119 aa		5.77	□□□□□ -1.49
CTNND1-222	ENST00000529919	TRAV10	A0A0B4J240	114 aa		5.77	□□□□□ -1.49
CTNND1-222	ENST00000529919	RPL28	P46779	137 aa	Known RBP	5.77	□□□□□ -1.49
CTNND1-222	ENST00000529919	IGLV2-18	A0A075B6J9	118 aa		5.76	□□□□□ -1.49
CTNND1-222	ENST00000529919	UNQ6190/PRO20217	Q6UXQ8	127 aa		5.76	□□□□□ -1.49
CTNND1-222	ENST00000529919	NUP210L	Q5VU65	1888 aa		5.76	□□□□□ -1.49
CTNND1-222	ENST00000529919	COX17	Q14061	63 aa		5.76	□□□□□ -1.49
CTNND1-222	ENST00000529919	ZNF580	Q9UK33	172 aa		5.76	□□□□□ -1.49
CTNND1-222	ENST00000529919	ADAMTSL4-AS1	Q5T5F5	129 aa		5.76	□□□□□ -1.49
CTNND1-222	ENST00000529919	KPRP	Q5T749	579 aa	Predicted RBP	5.76	□□□□□ -1.49
CTNND1-222	ENST00000529919	LELP1	Q5T871	98 aa		5.76	□□□□□ -1.49
CTNND1-222	ENST00000529919	LOC107984640	A0A0U1RRK4	108 aa		5.75	□□□□□ -1.49
CTNND1-222	ENST00000529919	PRR3	P79522	188 aa	Known RBP	5.75	□□□□□ -1.49
CTNND1-222	ENST00000529919		Q8N814	137 aa		5.75	□□□□□ -1.49
CTNND1-222	ENST00000529919		M0R2N4	97 aa		5.75	□□□□□ -1.49
CTNND1-222	ENST00000529919	PSPHP1	O15172	72 aa		5.75	□□□□□ -1.49
CTNND1-222	ENST00000529919	C9orf116	Q5BN46	136 aa	Predicted RBP	5.75	□□□□□ -1.49
CTNND1-222	ENST00000529919		A0A087WYN8	130 aa		5.74	□□□□□ -1.49
CTNND1-222	ENST00000529919	IGLV1-40	P01703	118 aa		5.74	□□□□□ -1.49
CTNND1-222	ENST00000529919	MRGPRG-AS1	Q2M3A8	158 aa		5.74	□□□□□ -1.49
CTNND1-222	ENST00000529919	TRBV10-3	A0A0K0K1G6	114 aa		5.74	□□□□□ -1.49
CTNND1-222	ENST00000529919	C1orf137	Q5JT78	98 aa		5.74	□□□□□ -1.49
CTNND1-222	ENST00000529919	TEP1	Q99973	2627 aa	Known RBP	5.74	□□□□□ -1.49
CTNND1-222	ENST00000529919	PRY	O14603	147 aa		5.74	□□□□□ -1.49
CTNND1-222	ENST00000529919	MUC7	Q8TAX7	377 aa		5.74	□□□□□ -1.49
CTNND1-222	ENST00000529919	LINC01547	P58512	204 aa	Predicted RBP	5.74	□□□□□ -1.49
CTNND1-222	ENST00000529919	IGLV9-49	A0A0B4J1Y8	123 aa		5.73	□□□□□ -1.49
CTNND1-222	ENST00000529919	LINC00846	Q9NV44	126 aa		5.73	□□□□□ -1.49
CTNND1-222	ENST00000529919	TRBV7-7	A0A0K0K1E9	115 aa		5.72	□□□□□ -1.49
CTNND1-222	ENST00000529919	COX6A2	Q02221	97 aa		5.72	□□□□□ -1.49
CTNND1-222	ENST00000529919	C16orf95	Q9H693	158 aa		5.72	□□□□□ -1.49
CTNND1-222	ENST00000529919	TRBV7-6	A0A0J9YX20	115 aa		5.72	□□□□□ -1.49
CTNND1-222	ENST00000529919	TMEM254	Q8TBM7	123 aa		5.72	□□□□□ -1.49
CTNND1-222	ENST00000529919	IGLV4-60	A0A075B6I1	120 aa		5.71	□□□□□ -1.49
CTNND1-222	ENST00000529919	CDIP1	Q9H305	208 aa		5.71	□□□□□ -1.49
CTNND1-222	ENST00000529919	LINC00575	Q6W349	94 aa		5.71	□□□□□ -1.5
CTNND1-222	ENST00000529919	ODF3L2	Q3SX64	289 aa		5.71	□□□□□ -1.5
CTNND1-222	ENST00000529919	RETN	Q9HD89	108 aa		5.71	□□□□□ -1.5
CTNND1-222	ENST00000529919	EDN2	P20800	178 aa		5.7	□□□□□ -1.5
CTNND1-222	ENST00000529919	EGFEM1P	Q0D2K5	195 aa		5.7	□□□□□ -1.5
CTNND1-222	ENST00000529919	KRTAP24-1	Q3LI83	254 aa		5.7	□□□□□ -1.5
CTNND1-222	ENST00000529919	AMELX	Q99217	191 aa		5.7	□□□□□ -1.5
CTNND1-222	ENST00000529919	CHCHD7	Q9BUK0	85 aa		5.7	□□□□□ -1.5
CTNND1-222	ENST00000529919	C7orf33	Q8WU49	177 aa		5.7	□□□□□ -1.5
CTNND1-222	ENST00000529919	BEAN1	Q3B7T3	259 aa		5.7	□□□□□ -1.5
CTNND1-222	ENST00000529919	ADAMTS20	P59510	1910 aa		5.7	□□□□□ -1.5
CTNND1-222	ENST00000529919	TET2	Q6N021	2002 aa	Predicted RBP	5.7	□□□□□ -1.5
CTNND1-222	ENST00000529919	PCOTH	Q58A44	107 aa		5.7	□□□□□ -1.5
CTNND1-222	ENST00000529919	CHD7	Q9P2D1	2997 aa		5.7	□□□□□ -1.5
CTNND1-222	ENST00000529919	CSDC2	Q9Y534	153 aa	Known RBP	5.7	□□□□□ -1.5
CTNND1-222	ENST00000529919	IGLV1-51	P01701	117 aa		5.69	□□□□□ -1.5
CTNND1-222	ENST00000529919		Q6ZVQ6	151 aa		5.69	□□□□□ -1.5
CTNND1-222	ENST00000529919	ZNF706	Q9Y5V0	76 aa	Predicted RBP	5.69	□□□□□ -1.5
CTNND1-222	ENST00000529919	PLAC8L1	A1L4L8	177 aa		5.69	□□□□□ -1.5
CTNND1-222	ENST00000529919	BRI3	O95415	125 aa		5.69	□□□□□ -1.5
CTNND1-222	ENST00000529919	ESRG	Q1W209	222 aa		5.69	□□□□□ -1.5
CTNND1-222	ENST00000529919	NUPR2	A6NF83	97 aa		5.68	□□□□□ -1.5
CTNND1-222	ENST00000529919	COX8C	Q7Z4L0	72 aa		5.68	□□□□□ -1.5
CTNND1-222	ENST00000529919	EXPH5	Q8NEV8	1989 aa		5.68	□□□□□ -1.5
CTNND1-222	ENST00000529919		A0A087WSZ3	146 aa		5.68	□□□□□ -1.5
CTNND1-222	ENST00000529919		A8MTW9	85 aa		5.68	□□□□□ -1.5
CTNND1-222	ENST00000529919	ITPR3	Q14573	2671 aa		5.68	□□□□□ -1.5
CTNND1-222	ENST00000529919	C10orf25	Q5T742	122 aa		5.68	□□□□□ -1.5
CTNND1-222	ENST00000529919	FLNA	P21333	2647 aa	Known RBP	5.67	□□□□□ -1.5
CTNND1-222	ENST00000529919	ATG2A	Q2TAZ0	1938 aa		5.67	□□□□□ -1.5
CTNND1-222	ENST00000529919	LAMA3	Q16787	3333 aa		5.67	□□□□□ -1.5
CTNND1-222	ENST00000529919	C6orf223	Q8N319	242 aa		5.67	□□□□□ -1.5
CTNND1-222	ENST00000529919	LINC00337	Q8N6G1	96 aa		5.67	□□□□□ -1.5
CTNND1-222	ENST00000529919	RAI1	Q7Z5J4	1906 aa	Predicted RBP	5.67	□□□□□ -1.5
CTNND1-222	ENST00000529919	DEFB116	Q30KQ4	102 aa		5.66	□□□□□ -1.5
CTNND1-222	ENST00000529919	NHLRC4	P0CG21	123 aa	Predicted RBP	5.66	□□□□□ -1.5
CTNND1-222	ENST00000529919	PRO0628	Q9UI54	55 aa		5.66	□□□□□ -1.5
CTNND1-222	ENST00000529919	IGHV6-1	A0A0B4J1U7	121 aa		5.65	□□□□□ -1.5
CTNND1-222	ENST00000529919	BAHCC1	Q9P281	2608 aa		5.65	□□□□□ -1.5
CTNND1-222	ENST00000529919	PTPRB	P23467	1997 aa		5.65	□□□□□ -1.5
CTNND1-222	ENST00000529919		H0Y9P7	68 aa		5.64	□□□□□ -1.51
CTNND1-222	ENST00000529919	ZNF292	O60281	2723 aa		5.64	□□□□□ -1.51
CTNND1-222	ENST00000529919	STAB1	Q9NY15	2570 aa		5.64	□□□□□ -1.51
CTNND1-222	ENST00000529919	SMCP	P49901	116 aa	Predicted RBP	5.64	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms