RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 TMEM14CQ9P0S9 112 aa1.76□□□□□ -2.13
CTR9-204ENST00000529355 CRCT1Q9UGL9 99 aa1.76□□□□□ -2.13
CTR9-204ENST00000529355 R4GMQ9 66 aa1.76□□□□□ -2.13
CTR9-204ENST00000529355 CACNA1CQ13936 2221 aa1.76□□□□□ -2.13
CTR9-204ENST00000529355 TNCP24821 2201 aa1.75□□□□□ -2.13
CTR9-204ENST00000529355 A0A087WVE0 104 aa1.75□□□□□ -2.13
CTR9-204ENST00000529355 M0R3E3 92 aa1.75□□□□□ -2.13
CTR9-204ENST00000529355 HMGN4O00479 90 aa1.75□□□□□ -2.13
CTR9-204ENST00000529355 IGLV1-51P01701 117 aa1.75□□□□□ -2.13
CTR9-204ENST00000529355 IGHV3-53P01767 116 aa1.75□□□□□ -2.13
CTR9-204ENST00000529355 CRPP02741 224 aa1.75□□□□□ -2.13
CTR9-204ENST00000529355 CTSGP08311 255 aa1.75□□□□□ -2.13
CTR9-204ENST00000529355 RPL28P46779 137 aaKnown RBP1.75□□□□□ -2.13
CTR9-204ENST00000529355 KRTAP12-1P59990 96 aa1.75□□□□□ -2.13
CTR9-204ENST00000529355 PDE6HQ13956 83 aa1.75□□□□□ -2.13
CTR9-204ENST00000529355 NREPQ16612 68 aa1.75□□□□□ -2.13
CTR9-204ENST00000529355 LINC01590Q5TEZ4 76 aa1.75□□□□□ -2.13
CTR9-204ENST00000529355 ZNF833PQ6ZTB9 187 aa1.75□□□□□ -2.13
CTR9-204ENST00000529355 ARHGAP5-AS1Q96IT6 56 aa1.75□□□□□ -2.13
CTR9-204ENST00000529355 OBSCN-AS1Q96MR7 158 aa1.75□□□□□ -2.13
CTR9-204ENST00000529355 Q9BRP9 147 aa1.75□□□□□ -2.13
CTR9-204ENST00000529355 C22orf24Q9Y442 160 aa1.75□□□□□ -2.13
CTR9-204ENST00000529355 SNURFQ9Y675 71 aa1.75□□□□□ -2.13
CTR9-204ENST00000529355 PRRC2BQ5JSZ5 2229 aaKnown RBP1.74□□□□□ -2.13
CTR9-204ENST00000529355 ALPK2Q86TB3 2170 aa1.74□□□□□ -2.13
CTR9-204ENST00000529355 IAPPP10997 89 aa1.74□□□□□ -2.13
CTR9-204ENST00000529355 PDE6GP18545 87 aa1.74□□□□□ -2.13
CTR9-204ENST00000529355 ZNF137PP52743 207 aa1.74□□□□□ -2.13
CTR9-204ENST00000529355 FXYD4P59646 89 aa1.74□□□□□ -2.13
CTR9-204ENST00000529355 Q8IYB0 196 aa1.74□□□□□ -2.13
CTR9-204ENST00000529355 Q8NAQ8 132 aa1.74□□□□□ -2.13
CTR9-204ENST00000529355 AMELXQ99217 191 aa1.74□□□□□ -2.13
CTR9-204ENST00000529355 TTTY10Q9BZA0 68 aa1.74□□□□□ -2.13
CTR9-204ENST00000529355 LINC00846Q9NV44 126 aa1.74□□□□□ -2.13
CTR9-204ENST00000529355 LENEPQ9Y5L5 61 aa1.74□□□□□ -2.13
CTR9-204ENST00000529355 MALRD1Q5VYJ5 2156 aa1.74□□□□□ -2.13
CTR9-204ENST00000529355 IGKV1D-37A0A075B6S9 117 aa1.73□□□□□ -2.13
CTR9-204ENST00000529355 TRAV12-3A0A0B4J271 114 aa1.73□□□□□ -2.13
CTR9-204ENST00000529355 CXorf51AA0A1B0GTR3 108 aa1.73□□□□□ -2.13
CTR9-204ENST00000529355 IGIPA6NJ69 53 aa1.73□□□□□ -2.13
CTR9-204ENST00000529355 H0YGX0 51 aa1.73□□□□□ -2.13
CTR9-204ENST00000529355 H7C2G1 150 aa1.73□□□□□ -2.13
CTR9-204ENST00000529355 I3L3M4 83 aa1.73□□□□□ -2.13
CTR9-204ENST00000529355 M0R1W7 72 aa1.73□□□□□ -2.13
CTR9-204ENST00000529355 LY6HO94772 140 aa1.73□□□□□ -2.13
CTR9-204ENST00000529355 NDUFA3O95167 84 aa1.73□□□□□ -2.13
CTR9-204ENST00000529355 CD24P25063 80 aa1.73□□□□□ -2.13
CTR9-204ENST00000529355 ROMO1P60602 79 aa1.73□□□□□ -2.13
CTR9-204ENST00000529355 TFF3Q07654 80 aa1.73□□□□□ -2.13
CTR9-204ENST00000529355 C1orf134Q5TEV5 83 aa1.73□□□□□ -2.13
CTR9-204ENST00000529355 C10orf113Q5VZT2 155 aa1.73□□□□□ -2.13
CTR9-204ENST00000529355 ENHOQ6UWT2 76 aa1.73□□□□□ -2.13
CTR9-204ENST00000529355 Q86TA4 180 aa1.73□□□□□ -2.13
CTR9-204ENST00000529355 PRR15LQ9BU68 103 aa1.73□□□□□ -2.13
CTR9-204ENST00000529355 NDUFA4L2Q9NRX3 87 aa1.73□□□□□ -2.13
CTR9-204ENST00000529355 ORMDL1Q9P0S3 153 aa1.73□□□□□ -2.13
CTR9-204ENST00000529355 A0A087WSZ3 146 aa1.72□□□□□ -2.13
CTR9-204ENST00000529355 IGHV3-73A0A0B4J1V6 119 aa1.72□□□□□ -2.13
CTR9-204ENST00000529355 TRBV6-5A0A0K0K1A5 114 aa1.72□□□□□ -2.13
CTR9-204ENST00000529355 DEFB114Q30KQ6 69 aa1.72□□□□□ -2.13
CTR9-204ENST00000529355 KRTAP4-1Q9BYQ7 146 aa1.72□□□□□ -2.13
CTR9-204ENST00000529355 MRPL36Q9P0J6 103 aaKnown RBP1.72□□□□□ -2.13
CTR9-204ENST00000529355 SPAG17Q6Q759 2223 aa1.72□□□□□ -2.13
CTR9-204ENST00000529355 SORL1Q92673 2214 aa1.71□□□□□ -2.14
CTR9-204ENST00000529355 PDE4DIPQ5VU43 2346 aa1.71□□□□□ -2.14
CTR9-204ENST00000529355 TRAV21A0A0B4J279 112 aa1.71□□□□□ -2.14
CTR9-204ENST00000529355 TRBV10-1A0A0K0K1A3 114 aa1.71□□□□□ -2.14
CTR9-204ENST00000529355 LCE6AA0A183 80 aa1.71□□□□□ -2.14
CTR9-204ENST00000529355 LECT2O14960 151 aa1.71□□□□□ -2.14
CTR9-204ENST00000529355 PRB4P10163 310 aaPredicted RBP1.71□□□□□ -2.14
CTR9-204ENST00000529355 Q8NDZ9 215 aa1.71□□□□□ -2.14
CTR9-204ENST00000529355 LINC01558Q9Y6Z2 57 aa1.71□□□□□ -2.14
CTR9-204ENST00000529355 UNC13CQ8NB66 2214 aa1.7□□□□□ -2.14
CTR9-204ENST00000529355 IGHV3-15A0A0B4J1V0 119 aa1.7□□□□□ -2.14
CTR9-204ENST00000529355 TRAV10A0A0B4J240 114 aa1.7□□□□□ -2.14
CTR9-204ENST00000529355 A0A1B0GU33 70 aa1.7□□□□□ -2.14
CTR9-204ENST00000529355 B4DSR2 109 aa1.7□□□□□ -2.14
CTR9-204ENST00000529355 H3BPC8 53 aa1.7□□□□□ -2.14
CTR9-204ENST00000529355 COL4A2P08572 1712 aa1.7□□□□□ -2.14
CTR9-204ENST00000529355 FAM27BQ5VT28 67 aa1.7□□□□□ -2.14
CTR9-204ENST00000529355 LYZL1Q6UWQ5 148 aa1.7□□□□□ -2.14
CTR9-204ENST00000529355 Q6ZQT0 140 aa1.7□□□□□ -2.14
CTR9-204ENST00000529355 LINC00208Q96KT6 92 aa1.7□□□□□ -2.14
CTR9-204ENST00000529355 C20orf166-AS1Q96NR2 134 aa1.7□□□□□ -2.14
CTR9-204ENST00000529355 CNFNQ9BYD5 112 aa1.7□□□□□ -2.14
CTR9-204ENST00000529355 KNTC1P50748 2209 aa1.69□□□□□ -2.14
CTR9-204ENST00000529355 LOC110117498A0A087WWA1 95 aa1.69□□□□□ -2.14
CTR9-204ENST00000529355 CLPSP04118 112 aa1.69□□□□□ -2.14
CTR9-204ENST00000529355 SPAG11BQ08648 103 aa1.69□□□□□ -2.14
CTR9-204ENST00000529355 MIR22HGQ0VDD5 57 aa1.69□□□□□ -2.14
CTR9-204ENST00000529355 NNATQ16517 81 aa1.69□□□□□ -2.14
CTR9-204ENST00000529355 SPAG11AQ6PDA7 123 aa1.69□□□□□ -2.14
CTR9-204ENST00000529355 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.69□□□□□ -2.14
CTR9-204ENST00000529355 DEFB106AQ8N104 65 aa1.69□□□□□ -2.14
CTR9-204ENST00000529355 WFDC9Q8NEX5 89 aa1.69□□□□□ -2.14
CTR9-204ENST00000529355 COX7B2Q8TF08 81 aa1.69□□□□□ -2.14
CTR9-204ENST00000529355 SMIM2Q9BVW6 85 aa1.69□□□□□ -2.14
CTR9-204ENST00000529355 C10orf142B7Z368 130 aa1.68□□□□□ -2.14
CTR9-204ENST00000529355 CNBPP62633 177 aaKnown RBP1.68□□□□□ -2.14
CTR9-204ENST00000529355 C1orf137Q5JT78 98 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms