RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 SPINK8P0C7L1 97 aa9.29□□□□□ -0.92
UBXN1-209ENST00000528907 AKR1D1P51857 326 aa9.29□□□□□ -0.92
UBXN1-209ENST00000528907 LINC00526Q96FQ7 95 aa9.29□□□□□ -0.92
UBXN1-209ENST00000528907 PKIGQ9Y2B9 76 aa9.29□□□□□ -0.92
UBXN1-209ENST00000528907 KRTDAPP60985 99 aa9.28□□□□□ -0.92
UBXN1-209ENST00000528907 C6orf226Q5I0X4 101 aa9.28□□□□□ -0.92
UBXN1-209ENST00000528907 SDIM1Q6ZPB5 146 aa9.28□□□□□ -0.92
UBXN1-209ENST00000528907 Q6ZRU5 148 aa9.28□□□□□ -0.92
UBXN1-209ENST00000528907 COX7B2Q8TF08 81 aa9.28□□□□□ -0.92
UBXN1-209ENST00000528907 KRTAP4-5Q9BYR2 181 aa9.28□□□□□ -0.92
UBXN1-209ENST00000528907 TRBV30A0A0K0K1B3 111 aa9.27□□□□□ -0.93
UBXN1-209ENST00000528907 KRTAP10-1P60331 282 aa9.27□□□□□ -0.93
UBXN1-209ENST00000528907 Q6ZSA8 131 aa9.27□□□□□ -0.93
UBXN1-209ENST00000528907 C20orf202A1L168 122 aa9.26□□□□□ -0.93
UBXN1-209ENST00000528907 TLX1NBP0CAT3 122 aa9.26□□□□□ -0.93
UBXN1-209ENST00000528907 SFTA2Q6UW10 78 aa9.26□□□□□ -0.93
UBXN1-209ENST00000528907 PMCHL2Q9BQD1 86 aa9.26□□□□□ -0.93
UBXN1-209ENST00000528907 TOMM7Q9P0U1 55 aa9.26□□□□□ -0.93
UBXN1-209ENST00000528907 CKS1BP61024 79 aa9.25□□□□□ -0.93
UBXN1-209ENST00000528907 C10orf25Q5T742 122 aa9.25□□□□□ -0.93
UBXN1-209ENST00000528907 UNQ6190/PRO20217Q6UXQ8 127 aa9.25□□□□□ -0.93
UBXN1-209ENST00000528907 C6orf48Q9UBA6 75 aa9.25□□□□□ -0.93
UBXN1-209ENST00000528907 CIRBPQ14011 172 aaKnown RBP9.24□□□□□ -0.93
UBXN1-209ENST00000528907 C2orf82Q6UX34 121 aa9.24□□□□□ -0.93
UBXN1-209ENST00000528907 LRP1BQ9NZR2 4599 aa9.23□□□□□ -0.93
UBXN1-209ENST00000528907 HERVK_113P61574 105 aa9.23□□□□□ -0.93
UBXN1-209ENST00000528907 LINC01620Q4KN68 170 aa9.23□□□□□ -0.93
UBXN1-209ENST00000528907 LOC107984640A0A0U1RRK4 108 aa9.22□□□□□ -0.93
UBXN1-209ENST00000528907 LEPROTO15243 131 aa9.22□□□□□ -0.93
UBXN1-209ENST00000528907 CDK2AP2O75956 126 aa9.22□□□□□ -0.93
UBXN1-209ENST00000528907 DNAH8Q96JB1 4490 aa9.22□□□□□ -0.93
UBXN1-209ENST00000528907 E9PLD3 99 aa9.21□□□□□ -0.94
UBXN1-209ENST00000528907 PLEKHB2Q96CS7 222 aa9.21□□□□□ -0.94
UBXN1-209ENST00000528907 ZNF625Q96I27 306 aaPredicted RBP9.21□□□□□ -0.94
UBXN1-209ENST00000528907 FAM30AQ9NZY2 134 aa9.2□□□□□ -0.94
UBXN1-209ENST00000528907 LINC00474Q9P2X8 69 aa9.2□□□□□ -0.94
UBXN1-209ENST00000528907 NDUFC2-KCTD14E9PQ53 114 aa9.19□□□□□ -0.94
UBXN1-209ENST00000528907 A0A096LNI7 61 aa9.18□□□□□ -0.94
UBXN1-209ENST00000528907 NMUP48645 174 aa9.18□□□□□ -0.94
UBXN1-209ENST00000528907 PTTG1IPP53801 180 aa9.18□□□□□ -0.94
UBXN1-209ENST00000528907 HERV-K104P63124 156 aa9.18□□□□□ -0.94
UBXN1-209ENST00000528907 SPACA4Q8TDM5 124 aa9.18□□□□□ -0.94
UBXN1-209ENST00000528907 TMA7Q9Y2S6 64 aaKnown RBP9.18□□□□□ -0.94
UBXN1-209ENST00000528907 HERC1Q15751 4861 aa9.18□□□□□ -0.94
UBXN1-209ENST00000528907 HSPG2P98160 4391 aa9.18□□□□□ -0.94
UBXN1-209ENST00000528907 J3QQQ9 107 aa9.17□□□□□ -0.94
UBXN1-209ENST00000528907 XGP55808 180 aa9.17□□□□□ -0.94
UBXN1-209ENST00000528907 COX17Q14061 63 aa9.17□□□□□ -0.94
UBXN1-209ENST00000528907 Q6ZRP5 223 aa9.17□□□□□ -0.94
UBXN1-209ENST00000528907 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.17□□□□□ -0.94
UBXN1-209ENST00000528907 MYMXA0A1B0GTQ4 84 aa9.16□□□□□ -0.94
UBXN1-209ENST00000528907 EPM2AB3EWF7 344 aa9.16□□□□□ -0.94
UBXN1-209ENST00000528907 PANO1I0J062 215 aa9.16□□□□□ -0.94
UBXN1-209ENST00000528907 TSPEAR-AS2P59090 65 aa9.16□□□□□ -0.94
UBXN1-209ENST00000528907 C9orf116Q5BN46 136 aaPredicted RBP9.16□□□□□ -0.94
UBXN1-209ENST00000528907 STPG4Q8N801 248 aa9.16□□□□□ -0.94
UBXN1-209ENST00000528907 NDUFA12Q9UI09 145 aa9.15□□□□□ -0.94
UBXN1-209ENST00000528907 ERG28Q9UKR5 140 aa9.15□□□□□ -0.94
UBXN1-209ENST00000528907 APOBP04114 4563 aaKnown RBP9.15□□□□□ -0.94
UBXN1-209ENST00000528907 LINC00587B1AMM8 73 aa9.14□□□□□ -0.95
UBXN1-209ENST00000528907 CHTF8P0CG12 524 aa9.14□□□□□ -0.95
UBXN1-209ENST00000528907 LGALS3P17931 250 aaKnown RBP9.14□□□□□ -0.95
UBXN1-209ENST00000528907 RPL18AQ02543 176 aaKnown RBP9.14□□□□□ -0.95
UBXN1-209ENST00000528907 GAGE2BQ13066 116 aa9.14□□□□□ -0.95
UBXN1-209ENST00000528907 PLAC8Q9NZF1 115 aa9.14□□□□□ -0.95
UBXN1-209ENST00000528907 JOSD1Q15040 202 aaPredicted RBP9.13□□□□□ -0.95
UBXN1-209ENST00000528907 SCXQ7RTU7 201 aa9.13□□□□□ -0.95
UBXN1-209ENST00000528907 CIRBP-AS1Q8TBR5 109 aa9.13□□□□□ -0.95
UBXN1-209ENST00000528907 IGKV2D-26A0A0A0MRZ7 120 aa9.12□□□□□ -0.95
UBXN1-209ENST00000528907 IGKV2-24A0A0C4DH68 120 aa9.12□□□□□ -0.95
UBXN1-209ENST00000528907 SCGB1D1O95968 90 aa9.12□□□□□ -0.95
UBXN1-209ENST00000528907 MAJINQ3KP22 176 aa9.12□□□□□ -0.95
UBXN1-209ENST00000528907 ANKRD39Q53RE8 183 aa9.12□□□□□ -0.95
UBXN1-209ENST00000528907 ATOH7Q8N100 152 aa9.12□□□□□ -0.95
UBXN1-209ENST00000528907 A0A087WYN8 130 aa9.11□□□□□ -0.95
UBXN1-209ENST00000528907 GAGE2EQ4V326 116 aa9.1□□□□□ -0.95
UBXN1-209ENST00000528907 C9orf129Q5T035 196 aaKnown RBP9.1□□□□□ -0.95
UBXN1-209ENST00000528907 GAGE2DQ9UEU5 116 aa9.1□□□□□ -0.95
UBXN1-209ENST00000528907 HSBP1L1C9JCN9 74 aa9.09□□□□□ -0.95
UBXN1-209ENST00000528907 PFN2P35080 140 aa9.09□□□□□ -0.95
UBXN1-209ENST00000528907 PLA2G2DQ9UNK4 145 aa9.09□□□□□ -0.95
UBXN1-209ENST00000528907 MEIG1Q5JSS6 88 aa9.08□□□□□ -0.96
UBXN1-209ENST00000528907 A0A0J9YXY3 114 aa9.07□□□□□ -0.96
UBXN1-209ENST00000528907 A0A1W2PNN7 141 aa9.07□□□□□ -0.96
UBXN1-209ENST00000528907 TIMM17BO60830 172 aa9.07□□□□□ -0.96
UBXN1-209ENST00000528907 DPH3Q96FX2 82 aa9.07□□□□□ -0.96
UBXN1-209ENST00000528907 LOC107984156A0A0G2JMH3 177 aa9.06□□□□□ -0.96
UBXN1-209ENST00000528907 ZNF815PA8K554 130 aa9.06□□□□□ -0.96
UBXN1-209ENST00000528907 SMIM13P0DJ93 91 aa9.06□□□□□ -0.96
UBXN1-209ENST00000528907 LINC00158P58513 81 aa9.06□□□□□ -0.96
UBXN1-209ENST00000528907 ARL17AQ8IVW1 177 aa9.06□□□□□ -0.96
UBXN1-209ENST00000528907 SND1-IT1Q9HBX3 110 aa9.06□□□□□ -0.96
UBXN1-209ENST00000528907 PYY3Q5JQD4 70 aa9.05□□□□□ -0.96
UBXN1-209ENST00000528907 LCE2DQ5TA82 110 aaPredicted RBP9.05□□□□□ -0.96
UBXN1-209ENST00000528907 KRTAP7-1Q8IUC3 87 aa9.05□□□□□ -0.96
UBXN1-209ENST00000528907 XAGE1AQ9HD64 81 aa9.05□□□□□ -0.96
UBXN1-209ENST00000528907 DMBT1Q9UGM3 2413 aaPredicted RBP9.04□□□□□ -0.96
UBXN1-209ENST00000528907 IGLV5-37A0A075B6J1 123 aa9.04□□□□□ -0.96
UBXN1-209ENST00000528907 HAMPP81172 84 aa9.04□□□□□ -0.96
UBXN1-209ENST00000528907 TTTY13Q9BZ97 58 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms