RNA–Protein interactions for RNA: ENST00000528575.1

YIF1A-212, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 3

Gene YIF1A, Length 532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-212ENST00000528575 KRTAP29-1A8MX34 341 aaPredicted RBP11.81□□□□□ -0.52
YIF1A-212ENST00000528575 RPL37AP61513 92 aaKnown RBP11.81□□□□□ -0.52
YIF1A-212ENST00000528575 LINC00469Q8N7U9 141 aa11.81□□□□□ -0.52
YIF1A-212ENST00000528575 H3BRM9 83 aa11.8□□□□□ -0.52
YIF1A-212ENST00000528575 TRGC2P03986 189 aa11.8□□□□□ -0.52
YIF1A-212ENST00000528575 CKS1BP61024 79 aa11.8□□□□□ -0.52
YIF1A-212ENST00000528575 C6orf226Q5I0X4 101 aa11.8□□□□□ -0.52
YIF1A-212ENST00000528575 GAGE2BQ13066 116 aa11.79□□□□□ -0.52
YIF1A-212ENST00000528575 UNQ6190/PRO20217Q6UXQ8 127 aa11.79□□□□□ -0.52
YIF1A-212ENST00000528575 COLCA2A8K830 154 aa11.78□□□□□ -0.52
YIF1A-212ENST00000528575 IGLC3P0DOY3 106 aa11.78□□□□□ -0.52
YIF1A-212ENST00000528575 RPL18AQ02543 176 aaKnown RBP11.78□□□□□ -0.52
YIF1A-212ENST00000528575 BAGE3Q86Y29 109 aa11.78□□□□□ -0.52
YIF1A-212ENST00000528575 C6orf48Q9UBA6 75 aa11.78□□□□□ -0.52
YIF1A-212ENST00000528575 SMIM1B2RUZ4 78 aa11.77□□□□□ -0.53
YIF1A-212ENST00000528575 NDUFC2-KCTD14E9PQ53 114 aa11.76□□□□□ -0.53
YIF1A-212ENST00000528575 HSBP1O75506 76 aa11.76□□□□□ -0.53
YIF1A-212ENST00000528575 HNRNPA3P51991 378 aaKnown RBP11.76□□□□□ -0.53
YIF1A-212ENST00000528575 PMCHL1Q16048 86 aa11.76□□□□□ -0.53
YIF1A-212ENST00000528575 C10orf25Q5T742 122 aa11.76□□□□□ -0.53
YIF1A-212ENST00000528575 TOMM7Q9P0U1 55 aa11.76□□□□□ -0.53
YIF1A-212ENST00000528575 TNXBP22105 4242 aa11.75□□□□□ -0.53
YIF1A-212ENST00000528575 F8VRH5 84 aa11.75□□□□□ -0.53
YIF1A-212ENST00000528575 TRAV12-1A0A0B4J245 112 aa11.74□□□□□ -0.53
YIF1A-212ENST00000528575 J3QL48 77 aa11.74□□□□□ -0.53
YIF1A-212ENST00000528575 NDUFA6P56556 154 aa11.74□□□□□ -0.53
YIF1A-212ENST00000528575 C2orf82Q6UX34 121 aa11.74□□□□□ -0.53
YIF1A-212ENST00000528575 Q6ZRP5 223 aa11.73□□□□□ -0.53
YIF1A-212ENST00000528575 COX7B2Q8TF08 81 aa11.73□□□□□ -0.53
YIF1A-212ENST00000528575 IFI27L1Q96BM0 104 aa11.73□□□□□ -0.53
YIF1A-212ENST00000528575 ODF1Q14990 250 aa11.72□□□□□ -0.53
YIF1A-212ENST00000528575 SFTA2Q6UW10 78 aa11.72□□□□□ -0.53
YIF1A-212ENST00000528575 C9orf116Q5BN46 136 aaPredicted RBP11.71□□□□□ -0.53
YIF1A-212ENST00000528575 IGLV5-39A0A0G2JS06 123 aa11.7□□□□□ -0.54
YIF1A-212ENST00000528575 ZNF22P17026 224 aaPredicted RBP11.69□□□□□ -0.54
YIF1A-212ENST00000528575 CHTOPQ9Y3Y2 248 aaKnown RBP11.69□□□□□ -0.54
YIF1A-212ENST00000528575 A0A1W2PNN7 141 aa11.68□□□□□ -0.54
YIF1A-212ENST00000528575 SERF1AO75920 110 aa11.68□□□□□ -0.54
YIF1A-212ENST00000528575 SPINK8P0C7L1 97 aa11.68□□□□□ -0.54
YIF1A-212ENST00000528575 LEPROTL1O95214 131 aa11.67□□□□□ -0.54
YIF1A-212ENST00000528575 HSPB8Q9UJY1 196 aa11.67□□□□□ -0.54
YIF1A-212ENST00000528575 PRR3P79522 188 aaKnown RBP11.66□□□□□ -0.54
YIF1A-212ENST00000528575 GAGE2EQ4V326 116 aa11.66□□□□□ -0.54
YIF1A-212ENST00000528575 GAGE2DQ9UEU5 116 aa11.66□□□□□ -0.54
YIF1A-212ENST00000528575 C11orf86A6NJI1 115 aa11.65□□□□□ -0.54
YIF1A-212ENST00000528575 OXTP01178 125 aa11.65□□□□□ -0.54
YIF1A-212ENST00000528575 TMEM170BQ5T4T1 132 aa11.65□□□□□ -0.54
YIF1A-212ENST00000528575 FAM19A2Q8N3H0 131 aa11.65□□□□□ -0.54
YIF1A-212ENST00000528575 LINC00310P59036 64 aa11.64□□□□□ -0.55
YIF1A-212ENST00000528575 COX17Q14061 63 aa11.62□□□□□ -0.55
YIF1A-212ENST00000528575 SCO1O75880 301 aa11.61□□□□□ -0.55
YIF1A-212ENST00000528575 MT1HL1P0DM35 61 aa11.61□□□□□ -0.55
YIF1A-212ENST00000528575 C9orf129Q5T035 196 aaKnown RBP11.61□□□□□ -0.55
YIF1A-212ENST00000528575 LRP2P98164 4655 aa11.61□□□□□ -0.55
YIF1A-212ENST00000528575 HIST1H2BKO60814 126 aa11.6□□□□□ -0.55
YIF1A-212ENST00000528575 HIST1H2BJP06899 126 aa11.6□□□□□ -0.55
YIF1A-212ENST00000528575 HIST1H2BOP23527 126 aa11.6□□□□□ -0.55
YIF1A-212ENST00000528575 HIST1H2BBP33778 126 aa11.6□□□□□ -0.55
YIF1A-212ENST00000528575 HIST1H2BDP58876 126 aa11.6□□□□□ -0.55
YIF1A-212ENST00000528575 HIST1H2BCP62807 126 aa11.6□□□□□ -0.55
YIF1A-212ENST00000528575 HIST2H2BEQ16778 126 aa11.6□□□□□ -0.55
YIF1A-212ENST00000528575 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.6□□□□□ -0.55
YIF1A-212ENST00000528575 HIST1H2BHQ93079 126 aa11.6□□□□□ -0.55
YIF1A-212ENST00000528575 HIST1H2BNQ99877 126 aa11.6□□□□□ -0.55
YIF1A-212ENST00000528575 HIST1H2BMQ99879 126 aa11.6□□□□□ -0.55
YIF1A-212ENST00000528575 TMEM223A0PJW6 202 aa11.59□□□□□ -0.55
YIF1A-212ENST00000528575 S100A1P23297 94 aa11.59□□□□□ -0.55
YIF1A-212ENST00000528575 PLNP26678 52 aa11.59□□□□□ -0.55
YIF1A-212ENST00000528575 M0QXV9 152 aa11.58□□□□□ -0.56
YIF1A-212ENST00000528575 SPINK6Q6UWN8 80 aa11.58□□□□□ -0.56
YIF1A-212ENST00000528575 FAM19A5Q7Z5A7 132 aaPredicted RBP11.58□□□□□ -0.56
YIF1A-212ENST00000528575 TP73-AS1Q9UF72 201 aa11.58□□□□□ -0.56
YIF1A-212ENST00000528575 PLA2G2DQ9UNK4 145 aa11.58□□□□□ -0.56
YIF1A-212ENST00000528575 FAM168BA1KXE4 195 aa11.57□□□□□ -0.56
YIF1A-212ENST00000528575 LBHQ53QV2 105 aaPredicted RBP11.57□□□□□ -0.56
YIF1A-212ENST00000528575 PHF5AQ7RTV0 110 aaKnown RBP11.57□□□□□ -0.56
YIF1A-212ENST00000528575 NUPR1O60356 82 aa11.56□□□□□ -0.56
YIF1A-212ENST00000528575 MAP1LC3CQ9BXW4 147 aa11.56□□□□□ -0.56
YIF1A-212ENST00000528575 ZNF625Q96I27 306 aaPredicted RBP11.55□□□□□ -0.56
YIF1A-212ENST00000528575 XAGE1AQ9HD64 81 aa11.55□□□□□ -0.56
YIF1A-212ENST00000528575 PSORS1C2Q9UIG4 136 aa11.55□□□□□ -0.56
YIF1A-212ENST00000528575 ERG28Q9UKR5 140 aa11.55□□□□□ -0.56
YIF1A-212ENST00000528575 FABP4P15090 132 aa11.54□□□□□ -0.56
YIF1A-212ENST00000528575 KRTAP7-1Q8IUC3 87 aa11.54□□□□□ -0.56
YIF1A-212ENST00000528575 LINC00587B1AMM8 73 aa11.53□□□□□ -0.56
YIF1A-212ENST00000528575 DPM2O94777 84 aa11.53□□□□□ -0.56
YIF1A-212ENST00000528575 HERV-K104P63124 156 aa11.53□□□□□ -0.56
YIF1A-212ENST00000528575 SRSF9Q13242 221 aaKnown RBP eCLIP11.53□□□□□ -0.56
YIF1A-212ENST00000528575 COA6Q5JTJ3 125 aaKnown RBP11.53□□□□□ -0.56
YIF1A-212ENST00000528575 H0Y8G0 127 aa11.52□□□□□ -0.57
YIF1A-212ENST00000528575 UBE2BP63146 152 aa11.52□□□□□ -0.57
YIF1A-212ENST00000528575 SERTAD4-AS1Q5TG53 156 aa11.52□□□□□ -0.57
YIF1A-212ENST00000528575 C22orf24Q9Y442 160 aa11.52□□□□□ -0.57
YIF1A-212ENST00000528575 IGLV5-37A0A075B6J1 123 aa11.51□□□□□ -0.57
YIF1A-212ENST00000528575 HERVK_113P61574 105 aa11.51□□□□□ -0.57
YIF1A-212ENST00000528575 IGKCP01834 107 aa11.5□□□□□ -0.57
YIF1A-212ENST00000528575 PFN2P35080 140 aa11.5□□□□□ -0.57
YIF1A-212ENST00000528575 C1orf137Q5JT78 98 aa11.5□□□□□ -0.57
YIF1A-212ENST00000528575 REG3GQ6UW15 175 aa11.5□□□□□ -0.57
YIF1A-212ENST00000528575 MRPL55Q7Z7F7 128 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms